RNA–Protein interactions for RNA: ENST00000552656.5

RNF41-211, Transcript of ring finger protein 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF41, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-211ENST00000552656 NISCHQ9Y2I1 1504 aa27.03■■□□□ 1.92
RNF41-211ENST00000552656 ABCC9O60706 1549 aa24.67■■□□□ 1.54
RNF41-211ENST00000552656 CCDC180Q9P1Z9 1646 aa24.36■■□□□ 1.49
RNF41-211ENST00000552656 DNAJC5BQ9UF47 199 aa23.48■■□□□ 1.35
RNF41-211ENST00000552656 RB1CC1Q8TDY2 1594 aa23.3■■□□□ 1.32
RNF41-211ENST00000552656 NACADO15069 1562 aa23.07■■□□□ 1.28
RNF41-211ENST00000552656 UNC13AQ9UPW8 1703 aa22.93■■□□□ 1.26
RNF41-211ENST00000552656 PABPN1Q86U42 306 aaKnown RBP eCLIP22.92■■□□□ 1.26
RNF41-211ENST00000552656 DCAF8L2P0C7V8 631 aa22.87■■□□□ 1.25
RNF41-211ENST00000552656 BICRAQ9NZM4 1560 aa22.75■■□□□ 1.23
RNF41-211ENST00000552656 MYO15BQ96JP2 1530 aa22.65■■□□□ 1.22
RNF41-211ENST00000552656 ZCCHC6Q5VYS8 1495 aaKnown RBP22.34■■□□□ 1.17
RNF41-211ENST00000552656 CC2D2AQ9P2K1 1620 aa22.28■■□□□ 1.16
RNF41-211ENST00000552656 DCAF1Q9Y4B6 1507 aa22.27■■□□□ 1.16
RNF41-211ENST00000552656 SHROOM4Q9ULL8 1493 aa22.25■■□□□ 1.15
RNF41-211ENST00000552656 SCRIBQ14160 1630 aa22.22■■□□□ 1.15
RNF41-211ENST00000552656 CECR2Q9BXF3 1484 aa22.22■■□□□ 1.15
RNF41-211ENST00000552656 EIF4G1Q04637 1599 aaKnown RBP22.16■■□□□ 1.14
RNF41-211ENST00000552656 DNAJC5Q9H3Z4 198 aa21.66■■□□□ 1.06
RNF41-211ENST00000552656 NCAPD3P42695 1498 aa21.32■■□□□ 1
RNF41-211ENST00000552656 CUX2O14529 1486 aa21.31■■□□□ 1
RNF41-211ENST00000552656 ERCC6Q03468 1493 aa21.24■□□□□ 0.99
RNF41-211ENST00000552656 ATAD2BQ9ULI0 1458 aa21.24■□□□□ 0.99
RNF41-211ENST00000552656 NESP48681 1621 aa21.15■□□□□ 0.98
RNF41-211ENST00000552656 SMARCA4P51532 1647 aa21.15■□□□□ 0.98
RNF41-211ENST00000552656 HMGXB3Q12766 1538 aa21.14■□□□□ 0.97
RNF41-211ENST00000552656 SMARCA2P51531 1590 aa21.11■□□□□ 0.97
RNF41-211ENST00000552656 THOC2Q8NI27 1593 aaKnown RBP20.98■□□□□ 0.95
RNF41-211ENST00000552656 BAZ1BQ9UIG0 1483 aaKnown RBP20.98■□□□□ 0.95
RNF41-211ENST00000552656 BAZ1AQ9NRL2 1556 aaPredicted RBP20.96■□□□□ 0.95
RNF41-211ENST00000552656 PEG3Q9GZU2 1588 aa20.94■□□□□ 0.94
RNF41-211ENST00000552656 KIF21AQ7Z4S6 1674 aa20.88■□□□□ 0.93
RNF41-211ENST00000552656 LAMC3Q9Y6N6 1575 aa20.88■□□□□ 0.93
RNF41-211ENST00000552656 MROH2BQ7Z745 1585 aa20.87■□□□□ 0.93
RNF41-211ENST00000552656 PDS5BQ9NTI5 1447 aa20.72■□□□□ 0.91
RNF41-211ENST00000552656 CADPSQ9ULU8 1353 aa20.64■□□□□ 0.89
RNF41-211ENST00000552656 WIZO95785 1651 aa20.61■□□□□ 0.89
RNF41-211ENST00000552656 MRC2Q9UBG0 1479 aa20.6■□□□□ 0.89
RNF41-211ENST00000552656 WDR62O43379 1518 aa20.59■□□□□ 0.89
RNF41-211ENST00000552656 TRIM41Q8WV44 630 aa20.58■□□□□ 0.89
RNF41-211ENST00000552656 CEP164Q9UPV0 1460 aa20.45■□□□□ 0.86
RNF41-211ENST00000552656 FANCD2Q9BXW9 1451 aa20.43■□□□□ 0.86
RNF41-211ENST00000552656 CFTRP13569 1480 aa20.37■□□□□ 0.85
RNF41-211ENST00000552656 URB2Q14146 1524 aaKnown RBP20.33■□□□□ 0.85
RNF41-211ENST00000552656 RSF1Q96T23 1441 aaPredicted RBP20.3■□□□□ 0.84
RNF41-211ENST00000552656 TOP2AP11388 1531 aaKnown RBP20.27■□□□□ 0.84
RNF41-211ENST00000552656 OSCARQ8IYS5 282 aa20.27■□□□□ 0.84
RNF41-211ENST00000552656 PRDM2Q13029 1718 aa20.19■□□□□ 0.82
RNF41-211ENST00000552656 RIMBP3CA6NJZ7 1639 aa20.15■□□□□ 0.82
RNF41-211ENST00000552656 RIMBP3BA6NNM3 1639 aa20.15■□□□□ 0.82
RNF41-211ENST00000552656 RIMBP3Q9UFD9 1639 aa20.15■□□□□ 0.82
RNF41-211ENST00000552656 ZNF608Q9ULD9 1512 aaPredicted RBP20.13■□□□□ 0.81
RNF41-211ENST00000552656 CCDC88BA6NC98 1476 aa20.06■□□□□ 0.8
RNF41-211ENST00000552656 IFT140Q96RY7 1462 aa20.05■□□□□ 0.8
RNF41-211ENST00000552656 TOPBP1Q92547 1522 aa20.03■□□□□ 0.8
RNF41-211ENST00000552656 ARHGEF11O15085 1522 aa20.02■□□□□ 0.8
RNF41-211ENST00000552656 EIF4G3O43432 1585 aaKnown RBP19.99■□□□□ 0.79
RNF41-211ENST00000552656 CHD1O14646 1710 aa19.93■□□□□ 0.78
RNF41-211ENST00000552656 DNMBPQ6XZF7 1577 aa19.91■□□□□ 0.78
RNF41-211ENST00000552656 TARBP1Q13395 1621 aaKnown RBP19.91■□□□□ 0.78
RNF41-211ENST00000552656 ABCC8Q09428 1581 aa19.88■□□□□ 0.77
RNF41-211ENST00000552656 AQRO60306 1485 aaKnown RBP eCLIP19.88■□□□□ 0.77
RNF41-211ENST00000552656 CYB5RLQ6IPT4 315 aa19.86■□□□□ 0.77
RNF41-211ENST00000552656 ARAP1Q96P48 1450 aa19.83■□□□□ 0.76
RNF41-211ENST00000552656 POLA1P09884 1462 aaPredicted RBP19.8■□□□□ 0.76
RNF41-211ENST00000552656 RAD54L2Q9Y4B4 1467 aa19.77■□□□□ 0.76
RNF41-211ENST00000552656 FBLN2P98095 1184 aa19.74■□□□□ 0.75
RNF41-211ENST00000552656 TDRD9Q8NDG6 1382 aaKnown RBP19.7■□□□□ 0.74
RNF41-211ENST00000552656 TRHP20396 242 aaPredicted RBP19.69■□□□□ 0.74
RNF41-211ENST00000552656 SOGA1O94964 1423 aa19.68■□□□□ 0.74
RNF41-211ENST00000552656 SNAPC4Q5SXM2 1469 aa19.67■□□□□ 0.74
RNF41-211ENST00000552656 CLASP1Q7Z460 1538 aa19.66■□□□□ 0.74
RNF41-211ENST00000552656 FGD5Q6ZNL6 1462 aa19.64■□□□□ 0.73
RNF41-211ENST00000552656 CUX1P39880 1505 aa19.61■□□□□ 0.73
RNF41-211ENST00000552656 WDR97A6NE52 1622 aa19.58■□□□□ 0.73
RNF41-211ENST00000552656 SYNJ1O43426 1573 aa19.56■□□□□ 0.72
RNF41-211ENST00000552656 MAGI1Q96QZ7 1491 aaPredicted RBP19.55■□□□□ 0.72
RNF41-211ENST00000552656 CHMP7Q8WUX9 453 aaPredicted RBP19.53■□□□□ 0.72
RNF41-211ENST00000552656 GRIN2BQ13224 1484 aa19.53■□□□□ 0.72
RNF41-211ENST00000552656 PBRM1Q86U86 1689 aa19.51■□□□□ 0.71
RNF41-211ENST00000552656 SYNJ2O15056 1496 aa19.5■□□□□ 0.71
RNF41-211ENST00000552656 GAPVD1Q14C86 1478 aa19.43■□□□□ 0.7
RNF41-211ENST00000552656 ABCA5Q8WWZ7 1642 aa19.42■□□□□ 0.7
RNF41-211ENST00000552656 ERCC6L2Q5T890 1561 aa19.4■□□□□ 0.7
RNF41-211ENST00000552656 ABCA10Q8WWZ4 1543 aa19.38■□□□□ 0.69
RNF41-211ENST00000552656 GRIN2AQ12879 1464 aa19.3■□□□□ 0.68
RNF41-211ENST00000552656 CEP170Q5SW79 1584 aa19.3■□□□□ 0.68
RNF41-211ENST00000552656 ADAMTS12P58397 1594 aa19.28■□□□□ 0.68
RNF41-211ENST00000552656 AEBP2Q6ZN18 517 aaPredicted RBP19.27■□□□□ 0.68
RNF41-211ENST00000552656 NUP160Q12769 1436 aa19.25■□□□□ 0.67
RNF41-211ENST00000552656 SHROOM2Q13796 1616 aa19.24■□□□□ 0.67
RNF41-211ENST00000552656 BIVM-ERCC5R4GMW8 1640 aa19.22■□□□□ 0.67
RNF41-211ENST00000552656 WRNQ14191 1432 aaPredicted RBP eCLIP19.19■□□□□ 0.66
RNF41-211ENST00000552656 KIF13AQ9H1H9 1805 aa19.18■□□□□ 0.66
RNF41-211ENST00000552656 TOP2BQ02880 1626 aa19.18■□□□□ 0.66
RNF41-211ENST00000552656 FHAD1B1AJZ9 1412 aa19.17■□□□□ 0.66
RNF41-211ENST00000552656 SUPT5HO00267 1087 aaKnown RBP19.15■□□□□ 0.66
RNF41-211ENST00000552656 ERICH3Q5RHP9 1530 aa19.12■□□□□ 0.65
RNF41-211ENST00000552656 PRG4Q92954 1404 aaPredicted RBP19.08■□□□□ 0.64
RNF41-211ENST00000552656 JPH4Q96JJ6 628 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms