RNA–Protein interactions for RNA: ENST00000552628.1

LINC02396-204, Transcript of long intergenic non-protein coding RNA 2396, humanhuman

TSL 4

Gene LINC02396, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02396-204ENST00000552628 NISCHQ9Y2I1 1504 aa37.74■■■■□ 3.63
LINC02396-204ENST00000552628 ABCC9O60706 1549 aa34.59■■■■□ 3.13
LINC02396-204ENST00000552628 CCDC180Q9P1Z9 1646 aa33.93■■■■□ 3.02
LINC02396-204ENST00000552628 DNAJC5BQ9UF47 199 aa32.82■■■□□ 2.84
LINC02396-204ENST00000552628 RB1CC1Q8TDY2 1594 aa32.63■■■□□ 2.81
LINC02396-204ENST00000552628 DCAF8L2P0C7V8 631 aa32.51■■■□□ 2.79
LINC02396-204ENST00000552628 PABPN1Q86U42 306 aaKnown RBP eCLIP32.27■■■□□ 2.76
LINC02396-204ENST00000552628 NACADO15069 1562 aa32.27■■■□□ 2.76
LINC02396-204ENST00000552628 UNC13AQ9UPW8 1703 aa31.77■■■□□ 2.68
LINC02396-204ENST00000552628 BICRAQ9NZM4 1560 aa31.6■■■□□ 2.65
LINC02396-204ENST00000552628 MYO15BQ96JP2 1530 aa31.57■■■□□ 2.64
LINC02396-204ENST00000552628 CECR2Q9BXF3 1484 aa31.17■■■□□ 2.58
LINC02396-204ENST00000552628 ZCCHC6Q5VYS8 1495 aaKnown RBP31.12■■■□□ 2.57
LINC02396-204ENST00000552628 CC2D2AQ9P2K1 1620 aa31.12■■■□□ 2.57
LINC02396-204ENST00000552628 SHROOM4Q9ULL8 1493 aa31.08■■■□□ 2.57
LINC02396-204ENST00000552628 SCRIBQ14160 1630 aa31.06■■■□□ 2.56
LINC02396-204ENST00000552628 DCAF1Q9Y4B6 1507 aa31.03■■■□□ 2.56
LINC02396-204ENST00000552628 EIF4G1Q04637 1599 aaKnown RBP30.92■■■□□ 2.54
LINC02396-204ENST00000552628 DNAJC5Q9H3Z4 198 aa30.46■■■□□ 2.47
LINC02396-204ENST00000552628 ERCC6Q03468 1493 aa29.94■■■□□ 2.38
LINC02396-204ENST00000552628 CUX2O14529 1486 aa29.87■■■□□ 2.37
LINC02396-204ENST00000552628 NCAPD3P42695 1498 aa29.81■■■□□ 2.36
LINC02396-204ENST00000552628 ATAD2BQ9ULI0 1458 aa29.68■■■□□ 2.34
LINC02396-204ENST00000552628 SMARCA2P51531 1590 aa29.56■■■□□ 2.32
LINC02396-204ENST00000552628 NESP48681 1621 aa29.54■■■□□ 2.32
LINC02396-204ENST00000552628 SMARCA4P51532 1647 aa29.5■■■□□ 2.31
LINC02396-204ENST00000552628 HMGXB3Q12766 1538 aa29.48■■■□□ 2.31
LINC02396-204ENST00000552628 BAZ1BQ9UIG0 1483 aaKnown RBP29.43■■■□□ 2.3
LINC02396-204ENST00000552628 BAZ1AQ9NRL2 1556 aaPredicted RBP29.33■■■□□ 2.29
LINC02396-204ENST00000552628 LAMC3Q9Y6N6 1575 aa29.19■■■□□ 2.26
LINC02396-204ENST00000552628 THOC2Q8NI27 1593 aaKnown RBP29.18■■■□□ 2.26
LINC02396-204ENST00000552628 TRIM41Q8WV44 630 aa29.16■■■□□ 2.26
LINC02396-204ENST00000552628 PDS5BQ9NTI5 1447 aa29.16■■■□□ 2.26
LINC02396-204ENST00000552628 PEG3Q9GZU2 1588 aa29.12■■■□□ 2.25
LINC02396-204ENST00000552628 MROH2BQ7Z745 1585 aa29.09■■■□□ 2.25
LINC02396-204ENST00000552628 KIF21AQ7Z4S6 1674 aa29.06■■■□□ 2.24
LINC02396-204ENST00000552628 CADPSQ9ULU8 1353 aa28.98■■■□□ 2.23
LINC02396-204ENST00000552628 MRC2Q9UBG0 1479 aa28.86■■■□□ 2.21
LINC02396-204ENST00000552628 WIZO95785 1651 aa28.74■■■□□ 2.19
LINC02396-204ENST00000552628 WDR62O43379 1518 aa28.73■■■□□ 2.19
LINC02396-204ENST00000552628 CEP164Q9UPV0 1460 aa28.69■■■□□ 2.18
LINC02396-204ENST00000552628 OSCARQ8IYS5 282 aa28.66■■■□□ 2.18
LINC02396-204ENST00000552628 FANCD2Q9BXW9 1451 aa28.63■■■□□ 2.17
LINC02396-204ENST00000552628 CFTRP13569 1480 aa28.47■■■□□ 2.15
LINC02396-204ENST00000552628 RSF1Q96T23 1441 aaPredicted RBP28.37■■■□□ 2.13
LINC02396-204ENST00000552628 URB2Q14146 1524 aaKnown RBP28.36■■■□□ 2.13
LINC02396-204ENST00000552628 TOP2AP11388 1531 aaKnown RBP28.3■■■□□ 2.12
LINC02396-204ENST00000552628 ZNF608Q9ULD9 1512 aaPredicted RBP28.13■■■□□ 2.09
LINC02396-204ENST00000552628 RIMBP3CA6NJZ7 1639 aa28.12■■■□□ 2.09
LINC02396-204ENST00000552628 RIMBP3BA6NNM3 1639 aa28.12■■■□□ 2.09
LINC02396-204ENST00000552628 RIMBP3Q9UFD9 1639 aa28.12■■■□□ 2.09
LINC02396-204ENST00000552628 IFT140Q96RY7 1462 aa28.12■■■□□ 2.09
LINC02396-204ENST00000552628 CCDC88BA6NC98 1476 aa28.08■■■□□ 2.09
LINC02396-204ENST00000552628 CYB5RLQ6IPT4 315 aa28.07■■■□□ 2.08
LINC02396-204ENST00000552628 PRDM2Q13029 1718 aa28.03■■■□□ 2.08
LINC02396-204ENST00000552628 FBLN2P98095 1184 aa28.02■■■□□ 2.08
LINC02396-204ENST00000552628 ARHGEF11O15085 1522 aa28■■■□□ 2.07
LINC02396-204ENST00000552628 TOPBP1Q92547 1522 aa28■■■□□ 2.07
LINC02396-204ENST00000552628 TRHP20396 242 aaPredicted RBP27.99■■■□□ 2.07
LINC02396-204ENST00000552628 ABCC8Q09428 1581 aa27.94■■■□□ 2.06
LINC02396-204ENST00000552628 AQRO60306 1485 aaKnown RBP eCLIP27.89■■■□□ 2.06
LINC02396-204ENST00000552628 EIF4G3O43432 1585 aaKnown RBP27.87■■■□□ 2.05
LINC02396-204ENST00000552628 DNMBPQ6XZF7 1577 aa27.83■■■□□ 2.05
LINC02396-204ENST00000552628 CHD1O14646 1710 aa27.75■■■□□ 2.03
LINC02396-204ENST00000552628 TARBP1Q13395 1621 aaKnown RBP27.7■■■□□ 2.03
LINC02396-204ENST00000552628 TDRD9Q8NDG6 1382 aaKnown RBP27.7■■■□□ 2.02
LINC02396-204ENST00000552628 ARAP1Q96P48 1450 aa27.69■■■□□ 2.02
LINC02396-204ENST00000552628 POLA1P09884 1462 aaPredicted RBP27.68■■■□□ 2.02
LINC02396-204ENST00000552628 RAD54L2Q9Y4B4 1467 aa27.68■■■□□ 2.02
LINC02396-204ENST00000552628 SOGA1O94964 1423 aa27.67■■■□□ 2.02
LINC02396-204ENST00000552628 CHMP7Q8WUX9 453 aaPredicted RBP27.67■■■□□ 2.02
LINC02396-204ENST00000552628 SNAPC4Q5SXM2 1469 aa27.53■■■□□ 2
LINC02396-204ENST00000552628 AEBP2Q6ZN18 517 aaPredicted RBP27.51■■□□□ 1.99
LINC02396-204ENST00000552628 FGD5Q6ZNL6 1462 aa27.49■■□□□ 1.99
LINC02396-204ENST00000552628 SYNJ1O43426 1573 aa27.43■■□□□ 1.98
LINC02396-204ENST00000552628 GRIN2BQ13224 1484 aa27.4■■□□□ 1.98
LINC02396-204ENST00000552628 MAGI1Q96QZ7 1491 aaPredicted RBP27.4■■□□□ 1.98
LINC02396-204ENST00000552628 CLASP1Q7Z460 1538 aa27.38■■□□□ 1.97
LINC02396-204ENST00000552628 WDR97A6NE52 1622 aa27.35■■□□□ 1.97
LINC02396-204ENST00000552628 CUX1P39880 1505 aa27.35■■□□□ 1.97
LINC02396-204ENST00000552628 SYNJ2O15056 1496 aa27.34■■□□□ 1.97
LINC02396-204ENST00000552628 GAPVD1Q14C86 1478 aa27.27■■□□□ 1.96
LINC02396-204ENST00000552628 PBRM1Q86U86 1689 aa27.17■■□□□ 1.94
LINC02396-204ENST00000552628 SUPT5HO00267 1087 aaKnown RBP27.17■■□□□ 1.94
LINC02396-204ENST00000552628 ABCA10Q8WWZ4 1543 aa27.1■■□□□ 1.93
LINC02396-204ENST00000552628 ABCA5Q8WWZ7 1642 aa27.02■■□□□ 1.92
LINC02396-204ENST00000552628 GRIN2AQ12879 1464 aa27.02■■□□□ 1.92
LINC02396-204ENST00000552628 WRNQ14191 1432 aaPredicted RBP eCLIP27.01■■□□□ 1.91
LINC02396-204ENST00000552628 ERCC6L2Q5T890 1561 aa27■■□□□ 1.91
LINC02396-204ENST00000552628 CEP170Q5SW79 1584 aa26.93■■□□□ 1.9
LINC02396-204ENST00000552628 FHAD1B1AJZ9 1412 aa26.9■■□□□ 1.9
LINC02396-204ENST00000552628 NUP160Q12769 1436 aa26.9■■□□□ 1.9
LINC02396-204ENST00000552628 ADAMTS12P58397 1594 aa26.88■■□□□ 1.89
LINC02396-204ENST00000552628 NPM1P06748 294 aaKnown RBP eCLIP26.85■■□□□ 1.89
LINC02396-204ENST00000552628 JPH4Q96JJ6 628 aa26.84■■□□□ 1.89
LINC02396-204ENST00000552628 PRG4Q92954 1404 aaPredicted RBP26.82■■□□□ 1.88
LINC02396-204ENST00000552628 TOP2BQ02880 1626 aa26.77■■□□□ 1.88
LINC02396-204ENST00000552628 FAM69CQ0P6D2 419 aa26.77■■□□□ 1.88
LINC02396-204ENST00000552628 SHROOM2Q13796 1616 aa26.76■■□□□ 1.87
LINC02396-204ENST00000552628 ERICH3Q5RHP9 1530 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms