RNA–Protein interactions for RNA: ENST00000552613.1

SLC8B1-215, Transcript of solute carrier family 8 member B1, humanhuman

TSL 2

Gene SLC8B1, Length 647 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC8B1-215ENST00000552613 NISCHQ9Y2I1 1504 aa28.89■■■□□ 2.22
SLC8B1-215ENST00000552613 ABCC9O60706 1549 aa25.82■■□□□ 1.72
SLC8B1-215ENST00000552613 CCDC180Q9P1Z9 1646 aa25.78■■□□□ 1.72
SLC8B1-215ENST00000552613 RB1CC1Q8TDY2 1594 aa24.55■■□□□ 1.52
SLC8B1-215ENST00000552613 NACADO15069 1562 aa24.42■■□□□ 1.5
SLC8B1-215ENST00000552613 DCAF8L2P0C7V8 631 aa24.33■■□□□ 1.49
SLC8B1-215ENST00000552613 DNAJC5BQ9UF47 199 aa24.24■■□□□ 1.47
SLC8B1-215ENST00000552613 MYO15BQ96JP2 1530 aa24.16■■□□□ 1.46
SLC8B1-215ENST00000552613 PABPN1Q86U42 306 aaKnown RBP eCLIP24.09■■□□□ 1.45
SLC8B1-215ENST00000552613 ZCCHC6Q5VYS8 1495 aaKnown RBP23.97■■□□□ 1.43
SLC8B1-215ENST00000552613 BICRAQ9NZM4 1560 aa23.89■■□□□ 1.41
SLC8B1-215ENST00000552613 DCAF1Q9Y4B6 1507 aa23.87■■□□□ 1.41
SLC8B1-215ENST00000552613 UNC13AQ9UPW8 1703 aa23.87■■□□□ 1.41
SLC8B1-215ENST00000552613 SHROOM4Q9ULL8 1493 aa23.57■■□□□ 1.36
SLC8B1-215ENST00000552613 SCRIBQ14160 1630 aa23.55■■□□□ 1.36
SLC8B1-215ENST00000552613 CC2D2AQ9P2K1 1620 aa23.28■■□□□ 1.32
SLC8B1-215ENST00000552613 EIF4G1Q04637 1599 aaKnown RBP23.27■■□□□ 1.32
SLC8B1-215ENST00000552613 CECR2Q9BXF3 1484 aa23.25■■□□□ 1.31
SLC8B1-215ENST00000552613 NCAPD3P42695 1498 aa22.61■■□□□ 1.21
SLC8B1-215ENST00000552613 ATAD2BQ9ULI0 1458 aa22.54■■□□□ 1.2
SLC8B1-215ENST00000552613 SMARCA4P51532 1647 aa22.47■■□□□ 1.19
SLC8B1-215ENST00000552613 SMARCA2P51531 1590 aa22.43■■□□□ 1.18
SLC8B1-215ENST00000552613 HMGXB3Q12766 1538 aa22.4■■□□□ 1.18
SLC8B1-215ENST00000552613 BAZ1AQ9NRL2 1556 aaPredicted RBP22.39■■□□□ 1.18
SLC8B1-215ENST00000552613 PEG3Q9GZU2 1588 aa22.29■■□□□ 1.16
SLC8B1-215ENST00000552613 BAZ1BQ9UIG0 1483 aaKnown RBP22.29■■□□□ 1.16
SLC8B1-215ENST00000552613 MROH2BQ7Z745 1585 aa22.28■■□□□ 1.16
SLC8B1-215ENST00000552613 ERCC6Q03468 1493 aa22.26■■□□□ 1.15
SLC8B1-215ENST00000552613 CUX2O14529 1486 aa22.22■■□□□ 1.15
SLC8B1-215ENST00000552613 NESP48681 1621 aa22.21■■□□□ 1.15
SLC8B1-215ENST00000552613 DNAJC5Q9H3Z4 198 aa22.18■■□□□ 1.14
SLC8B1-215ENST00000552613 LAMC3Q9Y6N6 1575 aa22.01■■□□□ 1.11
SLC8B1-215ENST00000552613 WIZO95785 1651 aa21.94■■□□□ 1.1
SLC8B1-215ENST00000552613 PDS5BQ9NTI5 1447 aa21.93■■□□□ 1.1
SLC8B1-215ENST00000552613 CADPSQ9ULU8 1353 aa21.93■■□□□ 1.1
SLC8B1-215ENST00000552613 THOC2Q8NI27 1593 aaKnown RBP21.92■■□□□ 1.1
SLC8B1-215ENST00000552613 RSF1Q96T23 1441 aaPredicted RBP21.87■■□□□ 1.09
SLC8B1-215ENST00000552613 KIF21AQ7Z4S6 1674 aa21.8■■□□□ 1.08
SLC8B1-215ENST00000552613 MRC2Q9UBG0 1479 aa21.73■■□□□ 1.07
SLC8B1-215ENST00000552613 TOP2AP11388 1531 aaKnown RBP21.7■■□□□ 1.07
SLC8B1-215ENST00000552613 CFTRP13569 1480 aa21.7■■□□□ 1.06
SLC8B1-215ENST00000552613 WDR62O43379 1518 aa21.67■■□□□ 1.06
SLC8B1-215ENST00000552613 FANCD2Q9BXW9 1451 aa21.65■■□□□ 1.06
SLC8B1-215ENST00000552613 CEP164Q9UPV0 1460 aa21.64■■□□□ 1.06
SLC8B1-215ENST00000552613 CCDC88BA6NC98 1476 aa21.5■■□□□ 1.03
SLC8B1-215ENST00000552613 URB2Q14146 1524 aaKnown RBP21.49■■□□□ 1.03
SLC8B1-215ENST00000552613 TOPBP1Q92547 1522 aa21.24■□□□□ 0.99
SLC8B1-215ENST00000552613 PRDM2Q13029 1718 aa21.24■□□□□ 0.99
SLC8B1-215ENST00000552613 OSCARQ8IYS5 282 aa21.23■□□□□ 0.99
SLC8B1-215ENST00000552613 IFT140Q96RY7 1462 aa21.23■□□□□ 0.99
SLC8B1-215ENST00000552613 ZNF608Q9ULD9 1512 aaPredicted RBP21.22■□□□□ 0.99
SLC8B1-215ENST00000552613 TRIM41Q8WV44 630 aa21.18■□□□□ 0.98
SLC8B1-215ENST00000552613 ABCC8Q09428 1581 aa21.18■□□□□ 0.98
SLC8B1-215ENST00000552613 DNMBPQ6XZF7 1577 aa21.14■□□□□ 0.98
SLC8B1-215ENST00000552613 POLA1P09884 1462 aaPredicted RBP21.05■□□□□ 0.96
SLC8B1-215ENST00000552613 EIF4G3O43432 1585 aaKnown RBP21.03■□□□□ 0.96
SLC8B1-215ENST00000552613 AQRO60306 1485 aaKnown RBP eCLIP21.03■□□□□ 0.962e-6■■■■■ 35.8
SLC8B1-215ENST00000552613 TARBP1Q13395 1621 aaKnown RBP21.03■□□□□ 0.96
SLC8B1-215ENST00000552613 RAD54L2Q9Y4B4 1467 aa20.97■□□□□ 0.95
SLC8B1-215ENST00000552613 SOGA1O94964 1423 aa20.95■□□□□ 0.95
SLC8B1-215ENST00000552613 TDRD9Q8NDG6 1382 aaKnown RBP20.93■□□□□ 0.94
SLC8B1-215ENST00000552613 SUPT5HO00267 1087 aaKnown RBP20.92■□□□□ 0.94
SLC8B1-215ENST00000552613 CUX1P39880 1505 aa20.92■□□□□ 0.94
SLC8B1-215ENST00000552613 FGD5Q6ZNL6 1462 aa20.91■□□□□ 0.94
SLC8B1-215ENST00000552613 RIMBP3CA6NJZ7 1639 aa20.88■□□□□ 0.93
SLC8B1-215ENST00000552613 RIMBP3BA6NNM3 1639 aa20.88■□□□□ 0.93
SLC8B1-215ENST00000552613 RIMBP3Q9UFD9 1639 aa20.88■□□□□ 0.93
SLC8B1-215ENST00000552613 ARHGEF11O15085 1522 aa20.87■□□□□ 0.93
SLC8B1-215ENST00000552613 FBLN2P98095 1184 aa20.84■□□□□ 0.93
SLC8B1-215ENST00000552613 SNAPC4Q5SXM2 1469 aa20.8■□□□□ 0.92
SLC8B1-215ENST00000552613 WDR97A6NE52 1622 aa20.78■□□□□ 0.92
SLC8B1-215ENST00000552613 CHD1O14646 1710 aa20.77■□□□□ 0.92
SLC8B1-215ENST00000552613 GRIN2BQ13224 1484 aa20.75■□□□□ 0.91
SLC8B1-215ENST00000552613 CYB5RLQ6IPT4 315 aa20.74■□□□□ 0.91
SLC8B1-215ENST00000552613 MAGI1Q96QZ7 1491 aaPredicted RBP20.74■□□□□ 0.91
SLC8B1-215ENST00000552613 CHMP7Q8WUX9 453 aaPredicted RBP20.71■□□□□ 0.91
SLC8B1-215ENST00000552613 ARAP1Q96P48 1450 aa20.69■□□□□ 0.9
SLC8B1-215ENST00000552613 ABCA10Q8WWZ4 1543 aa20.69■□□□□ 0.9
SLC8B1-215ENST00000552613 GAPVD1Q14C86 1478 aa20.69■□□□□ 0.9
SLC8B1-215ENST00000552613 SYNJ2O15056 1496 aa20.68■□□□□ 0.9
SLC8B1-215ENST00000552613 CLASP1Q7Z460 1538 aa20.67■□□□□ 0.9
SLC8B1-215ENST00000552613 WRNQ14191 1432 aaPredicted RBP eCLIP20.62■□□□□ 0.89
SLC8B1-215ENST00000552613 ABCA5Q8WWZ7 1642 aa20.61■□□□□ 0.89
SLC8B1-215ENST00000552613 SYNJ1O43426 1573 aa20.6■□□□□ 0.89
SLC8B1-215ENST00000552613 TOP2BQ02880 1626 aa20.56■□□□□ 0.88
SLC8B1-215ENST00000552613 PBRM1Q86U86 1689 aa20.54■□□□□ 0.88
SLC8B1-215ENST00000552613 BIVM-ERCC5R4GMW8 1640 aa20.53■□□□□ 0.88
SLC8B1-215ENST00000552613 GRIN2AQ12879 1464 aa20.49■□□□□ 0.87
SLC8B1-215ENST00000552613 TRHP20396 242 aaPredicted RBP20.45■□□□□ 0.86
SLC8B1-215ENST00000552613 ADAMTS12P58397 1594 aa20.45■□□□□ 0.86
SLC8B1-215ENST00000552613 FHAD1B1AJZ9 1412 aa20.44■□□□□ 0.86
SLC8B1-215ENST00000552613 NUP160Q12769 1436 aa20.44■□□□□ 0.86
SLC8B1-215ENST00000552613 ERICH3Q5RHP9 1530 aa20.41■□□□□ 0.86
SLC8B1-215ENST00000552613 CEP170Q5SW79 1584 aa20.39■□□□□ 0.85
SLC8B1-215ENST00000552613 ERCC6L2Q5T890 1561 aa20.36■□□□□ 0.85
SLC8B1-215ENST00000552613 SHROOM2Q13796 1616 aa20.27■□□□□ 0.84
SLC8B1-215ENST00000552613 IGF1RP08069 1367 aa20.23■□□□□ 0.83
SLC8B1-215ENST00000552613 JPH4Q96JJ6 628 aa20.23■□□□□ 0.83
SLC8B1-215ENST00000552613 PRG4Q92954 1404 aaPredicted RBP20.22■□□□□ 0.83
SLC8B1-215ENST00000552613 KIF27Q86VH2 1401 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 147.4 ms