RNA–Protein interactions for RNA: ENST00000552578.1

C12orf42-215, Transcript of chromosome 12 open reading frame 42, humanhuman

APPRIS ALT2 TSL 3

Gene C12orf42, Length 831 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf42-215ENST00000552578 NISCHQ9Y2I1 1504 aa45.82■■■■■ 4.92
C12orf42-215ENST00000552578 ABCC9O60706 1549 aa42.12■■■■■ 4.33
C12orf42-215ENST00000552578 CCDC180Q9P1Z9 1646 aa41.35■■■■■ 4.21
C12orf42-215ENST00000552578 DNAJC5BQ9UF47 199 aa40.29■■■■■ 4.04
C12orf42-215ENST00000552578 RB1CC1Q8TDY2 1594 aa39.76■■■■□ 3.96
C12orf42-215ENST00000552578 NACADO15069 1562 aa39.35■■■■□ 3.89
C12orf42-215ENST00000552578 PABPN1Q86U42 306 aaKnown RBP eCLIP39.15■■■■□ 3.86
C12orf42-215ENST00000552578 DCAF8L2P0C7V8 631 aa39.01■■■■□ 3.84
C12orf42-215ENST00000552578 UNC13AQ9UPW8 1703 aa38.94■■■■□ 3.82
C12orf42-215ENST00000552578 BICRAQ9NZM4 1560 aa38.69■■■■□ 3.78
C12orf42-215ENST00000552578 MYO15BQ96JP2 1530 aa38.63■■■■□ 3.78
C12orf42-215ENST00000552578 SHROOM4Q9ULL8 1493 aa38.1■■■■□ 3.69
C12orf42-215ENST00000552578 CECR2Q9BXF3 1484 aa38.05■■■■□ 3.68
C12orf42-215ENST00000552578 CC2D2AQ9P2K1 1620 aa38.01■■■■□ 3.68
C12orf42-215ENST00000552578 DCAF1Q9Y4B6 1507 aa37.83■■■■□ 3.65
C12orf42-215ENST00000552578 ZCCHC6Q5VYS8 1495 aaKnown RBP37.77■■■■□ 3.64
C12orf42-215ENST00000552578 EIF4G1Q04637 1599 aaKnown RBP37.74■■■■□ 3.63
C12orf42-215ENST00000552578 SCRIBQ14160 1630 aa37.66■■■■□ 3.62
C12orf42-215ENST00000552578 DNAJC5Q9H3Z4 198 aa37.59■■■■□ 3.61
C12orf42-215ENST00000552578 CUX2O14529 1486 aa36.66■■■■□ 3.46
C12orf42-215ENST00000552578 NCAPD3P42695 1498 aa36.41■■■■□ 3.42
C12orf42-215ENST00000552578 ERCC6Q03468 1493 aa36.41■■■■□ 3.42
C12orf42-215ENST00000552578 ATAD2BQ9ULI0 1458 aa36.14■■■■□ 3.38
C12orf42-215ENST00000552578 NESP48681 1621 aa36.01■■■■□ 3.35
C12orf42-215ENST00000552578 HMGXB3Q12766 1538 aa35.98■■■■□ 3.35
C12orf42-215ENST00000552578 SMARCA2P51531 1590 aa35.97■■■■□ 3.35
C12orf42-215ENST00000552578 SMARCA4P51532 1647 aa35.84■■■■□ 3.33
C12orf42-215ENST00000552578 THOC2Q8NI27 1593 aaKnown RBP35.79■■■■□ 3.32
C12orf42-215ENST00000552578 BAZ1BQ9UIG0 1483 aaKnown RBP35.7■■■■□ 3.31
C12orf42-215ENST00000552578 LAMC3Q9Y6N6 1575 aa35.61■■■■□ 3.29
C12orf42-215ENST00000552578 BAZ1AQ9NRL2 1556 aaPredicted RBP35.59■■■■□ 3.29
C12orf42-215ENST00000552578 PEG3Q9GZU2 1588 aa35.55■■■■□ 3.28
C12orf42-215ENST00000552578 KIF21AQ7Z4S6 1674 aa35.52■■■■□ 3.28
C12orf42-215ENST00000552578 TRIM41Q8WV44 630 aa35.51■■■■□ 3.28
C12orf42-215ENST00000552578 PDS5BQ9NTI5 1447 aa35.49■■■■□ 3.27
C12orf42-215ENST00000552578 MROH2BQ7Z745 1585 aa35.26■■■■□ 3.24
C12orf42-215ENST00000552578 CADPSQ9ULU8 1353 aa35.25■■■■□ 3.23
C12orf42-215ENST00000552578 MRC2Q9UBG0 1479 aa35.18■■■■□ 3.22
C12orf42-215ENST00000552578 WDR62O43379 1518 aa35.11■■■■□ 3.21
C12orf42-215ENST00000552578 OSCARQ8IYS5 282 aa34.95■■■■□ 3.19
C12orf42-215ENST00000552578 CEP164Q9UPV0 1460 aa34.87■■■■□ 3.17
C12orf42-215ENST00000552578 WIZO95785 1651 aa34.81■■■■□ 3.16
C12orf42-215ENST00000552578 FANCD2Q9BXW9 1451 aa34.79■■■■□ 3.16
C12orf42-215ENST00000552578 CFTRP13569 1480 aa34.68■■■■□ 3.14
C12orf42-215ENST00000552578 URB2Q14146 1524 aaKnown RBP34.54■■■■□ 3.12
C12orf42-215ENST00000552578 RIMBP3CA6NJZ7 1639 aa34.47■■■■□ 3.11
C12orf42-215ENST00000552578 RIMBP3BA6NNM3 1639 aa34.47■■■■□ 3.11
C12orf42-215ENST00000552578 RIMBP3Q9UFD9 1639 aa34.47■■■■□ 3.11
C12orf42-215ENST00000552578 RSF1Q96T23 1441 aaPredicted RBP34.31■■■■□ 3.08
C12orf42-215ENST00000552578 TOP2AP11388 1531 aaKnown RBP34.29■■■■□ 3.08
C12orf42-215ENST00000552578 ARHGEF11O15085 1522 aa34.25■■■■□ 3.07
C12orf42-215ENST00000552578 IFT140Q96RY7 1462 aa34.25■■■■□ 3.07
C12orf42-215ENST00000552578 ZNF608Q9ULD9 1512 aaPredicted RBP34.25■■■■□ 3.07
C12orf42-215ENST00000552578 PRDM2Q13029 1718 aa34.18■■■■□ 3.06
C12orf42-215ENST00000552578 CYB5RLQ6IPT4 315 aa34.13■■■■□ 3.05
C12orf42-215ENST00000552578 TOPBP1Q92547 1522 aa34.04■■■■□ 3.04
C12orf42-215ENST00000552578 EIF4G3O43432 1585 aaKnown RBP34■■■■□ 3.03
C12orf42-215ENST00000552578 ABCC8Q09428 1581 aa33.98■■■■□ 3.03
C12orf42-215ENST00000552578 CCDC88BA6NC98 1476 aa33.97■■■■□ 3.03
C12orf42-215ENST00000552578 TRHP20396 242 aaPredicted RBP33.97■■■■□ 3.03
C12orf42-215ENST00000552578 CHD1O14646 1710 aa33.92■■■■□ 3.02
C12orf42-215ENST00000552578 ARAP1Q96P48 1450 aa33.9■■■■□ 3.02
C12orf42-215ENST00000552578 AQRO60306 1485 aaKnown RBP eCLIP33.86■■■■□ 3.01
C12orf42-215ENST00000552578 DNMBPQ6XZF7 1577 aa33.82■■■■□ 3
C12orf42-215ENST00000552578 TARBP1Q13395 1621 aaKnown RBP33.79■■■■□ 3
C12orf42-215ENST00000552578 FBLN2P98095 1184 aa33.79■■■■□ 3
C12orf42-215ENST00000552578 POLA1P09884 1462 aaPredicted RBP33.64■■■□□ 2.98
C12orf42-215ENST00000552578 TDRD9Q8NDG6 1382 aaKnown RBP33.55■■■□□ 2.96
C12orf42-215ENST00000552578 AEBP2Q6ZN18 517 aaPredicted RBP33.54■■■□□ 2.96
C12orf42-215ENST00000552578 SOGA1O94964 1423 aa33.53■■■□□ 2.96
C12orf42-215ENST00000552578 RAD54L2Q9Y4B4 1467 aa33.53■■■□□ 2.96
C12orf42-215ENST00000552578 CLASP1Q7Z460 1538 aa33.49■■■□□ 2.95
C12orf42-215ENST00000552578 CHMP7Q8WUX9 453 aaPredicted RBP33.47■■■□□ 2.95
C12orf42-215ENST00000552578 SNAPC4Q5SXM2 1469 aa33.44■■■□□ 2.94
C12orf42-215ENST00000552578 WDR97A6NE52 1622 aa33.4■■■□□ 2.94
C12orf42-215ENST00000552578 SYNJ1O43426 1573 aa33.38■■■□□ 2.93
C12orf42-215ENST00000552578 MAGI1Q96QZ7 1491 aaPredicted RBP33.37■■■□□ 2.93
C12orf42-215ENST00000552578 FGD5Q6ZNL6 1462 aa33.31■■■□□ 2.92
C12orf42-215ENST00000552578 GRIN2BQ13224 1484 aa33.3■■■□□ 2.92
C12orf42-215ENST00000552578 SYNJ2O15056 1496 aa33.27■■■□□ 2.92
C12orf42-215ENST00000552578 GAPVD1Q14C86 1478 aa33.2■■■□□ 2.91
C12orf42-215ENST00000552578 CUX1P39880 1505 aa33.17■■■□□ 2.9
C12orf42-215ENST00000552578 PBRM1Q86U86 1689 aa33.07■■■□□ 2.89
C12orf42-215ENST00000552578 ERCC6L2Q5T890 1561 aa32.98■■■□□ 2.87
C12orf42-215ENST00000552578 ABCA10Q8WWZ4 1543 aa32.93■■■□□ 2.86
C12orf42-215ENST00000552578 ABCA5Q8WWZ7 1642 aa32.91■■■□□ 2.86
C12orf42-215ENST00000552578 GRIN2AQ12879 1464 aa32.85■■■□□ 2.85
C12orf42-215ENST00000552578 NUP160Q12769 1436 aa32.8■■■□□ 2.84
C12orf42-215ENST00000552578 CEP170Q5SW79 1584 aa32.79■■■□□ 2.84
C12orf42-215ENST00000552578 KIF13AQ9H1H9 1805 aa32.72■■■□□ 2.83
C12orf42-215ENST00000552578 ADAMTS12P58397 1594 aa32.7■■■□□ 2.83
C12orf42-215ENST00000552578 SHROOM2Q13796 1616 aa32.69■■■□□ 2.82
C12orf42-215ENST00000552578 WRNQ14191 1432 aaPredicted RBP eCLIP32.68■■■□□ 2.82
C12orf42-215ENST00000552578 FHAD1B1AJZ9 1412 aa32.65■■■□□ 2.82
C12orf42-215ENST00000552578 PRG4Q92954 1404 aaPredicted RBP32.54■■■□□ 2.8
C12orf42-215ENST00000552578 JPH4Q96JJ6 628 aa32.54■■■□□ 2.8
C12orf42-215ENST00000552578 FAM69CQ0P6D2 419 aa32.5■■■□□ 2.79
C12orf42-215ENST00000552578 ERICH3Q5RHP9 1530 aa32.49■■■□□ 2.79
C12orf42-215ENST00000552578 ABCC10Q5T3U5 1492 aa32.47■■■□□ 2.79
C12orf42-215ENST00000552578 NPM1P06748 294 aaKnown RBP eCLIP32.44■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms