RNA–Protein interactions for RNA: ENST00000552555.1

DDX23-215, Transcript of DEAD-box helicase 23, humanhuman

TSL 4

Gene DDX23, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-215ENST00000552555 NISCHQ9Y2I1 1504 aa23.21■■□□□ 1.31
DDX23-215ENST00000552555 CCDC180Q9P1Z9 1646 aa20.16■□□□□ 0.82
DDX23-215ENST00000552555 ZCCHC6Q5VYS8 1495 aaKnown RBP19.54■□□□□ 0.72
DDX23-215ENST00000552555 DCAF1Q9Y4B6 1507 aa19.3■□□□□ 0.68
DDX23-215ENST00000552555 MYO15BQ96JP2 1530 aa19.05■□□□□ 0.64
DDX23-215ENST00000552555 DCAF8L2P0C7V8 631 aa18.88■□□□□ 0.61
DDX23-215ENST00000552555 ABCC9O60706 1549 aa18.84■□□□□ 0.61
DDX23-215ENST00000552555 SHROOM4Q9ULL8 1493 aa18.8■□□□□ 0.6
DDX23-215ENST00000552555 NACADO15069 1562 aa18.78■□□□□ 0.6
DDX23-215ENST00000552555 RB1CC1Q8TDY2 1594 aa18.53■□□□□ 0.56
DDX23-215ENST00000552555 SCRIBQ14160 1630 aa18.44■□□□□ 0.54
DDX23-215ENST00000552555 SUPT5HO00267 1087 aaKnown RBP18.17■□□□□ 0.5
DDX23-215ENST00000552555 UNC13AQ9UPW8 1703 aa18.06■□□□□ 0.48
DDX23-215ENST00000552555 RSF1Q96T23 1441 aaPredicted RBP18.06■□□□□ 0.48
DDX23-215ENST00000552555 BICRAQ9NZM4 1560 aa18■□□□□ 0.47
DDX23-215ENST00000552555 CECR2Q9BXF3 1484 aa17.97■□□□□ 0.47
DDX23-215ENST00000552555 BAZ1AQ9NRL2 1556 aaPredicted RBP17.9■□□□□ 0.46
DDX23-215ENST00000552555 MROH2BQ7Z745 1585 aa17.89■□□□□ 0.45
DDX23-215ENST00000552555 PABPN1Q86U42 306 aaKnown RBP eCLIP17.78■□□□□ 0.44
DDX23-215ENST00000552555 SMARCA4P51532 1647 aa17.76■□□□□ 0.43
DDX23-215ENST00000552555 WIZO95785 1651 aa17.68■□□□□ 0.42
DDX23-215ENST00000552555 PEG3Q9GZU2 1588 aa17.65■□□□□ 0.42
DDX23-215ENST00000552555 CHIC1Q5VXU3 224 aa17.6■□□□□ 0.41
DDX23-215ENST00000552555 TOP2AP11388 1531 aaKnown RBP17.6■□□□□ 0.41
DDX23-215ENST00000552555 ATAD2BQ9ULI0 1458 aa17.49■□□□□ 0.39
DDX23-215ENST00000552555 SMARCA2P51531 1590 aa17.47■□□□□ 0.39
DDX23-215ENST00000552555 EIF4G1Q04637 1599 aaKnown RBP17.41■□□□□ 0.38
DDX23-215ENST00000552555 CCDC88BA6NC98 1476 aa17.41■□□□□ 0.38
DDX23-215ENST00000552555 NCAPD3P42695 1498 aa17.37■□□□□ 0.37
DDX23-215ENST00000552555 BAZ1BQ9UIG0 1483 aaKnown RBP17.34■□□□□ 0.37
DDX23-215ENST00000552555 HMGXB3Q12766 1538 aa17.32■□□□□ 0.36
DDX23-215ENST00000552555 DNAJC5BQ9UF47 199 aa17.2■□□□□ 0.34
DDX23-215ENST00000552555 TRIM41Q8WV44 630 aa17.15■□□□□ 0.34
DDX23-215ENST00000552555 CC2D2AQ9P2K1 1620 aa17.08■□□□□ 0.32
DDX23-215ENST00000552555 CFTRP13569 1480 aa16.99■□□□□ 0.31
DDX23-215ENST00000552555 ABCC8Q09428 1581 aa16.98■□□□□ 0.31
DDX23-215ENST00000552555 WRNQ14191 1432 aaPredicted RBP eCLIP16.96■□□□□ 0.3
DDX23-215ENST00000552555 CADPSQ9ULU8 1353 aa16.89■□□□□ 0.29
DDX23-215ENST00000552555 EEA1Q15075 1411 aa16.86■□□□□ 0.29
DDX23-215ENST00000552555 SYNJ1O43426 1573 aa16.85■□□□□ 0.29
DDX23-215ENST00000552555 LOC105371045A0A1W2PR82 267 aa16.84■□□□□ 0.29
DDX23-215ENST00000552555 TOP2BQ02880 1626 aa16.81■□□□□ 0.28
DDX23-215ENST00000552555 PRDM2Q13029 1718 aa16.79■□□□□ 0.28
DDX23-215ENST00000552555 BIVM-ERCC5R4GMW8 1640 aa16.78■□□□□ 0.28
DDX23-215ENST00000552555 SOGA1O94964 1423 aa16.75■□□□□ 0.27
DDX23-215ENST00000552555 FAM9AQ8IZU1 332 aaPredicted RBP16.73■□□□□ 0.27
DDX23-215ENST00000552555 CUX1P39880 1505 aa16.72■□□□□ 0.27
DDX23-215ENST00000552555 LAMC3Q9Y6N6 1575 aa16.69■□□□□ 0.26
DDX23-215ENST00000552555 CSRNP3Q8WYN3 585 aa16.68■□□□□ 0.26
DDX23-215ENST00000552555 RUSC2Q8N2Y8 1516 aa16.66■□□□□ 0.26
DDX23-215ENST00000552555 FANCD2Q9BXW9 1451 aa16.66■□□□□ 0.26
DDX23-215ENST00000552555 NESP48681 1621 aa16.59■□□□□ 0.25
DDX23-215ENST00000552555 KIF21BO75037 1637 aa16.57■□□□□ 0.24
DDX23-215ENST00000552555 TNIKQ9UKE5 1360 aa16.57■□□□□ 0.24
DDX23-215ENST00000552555 PDS5BQ9NTI5 1447 aa16.56■□□□□ 0.24
DDX23-215ENST00000552555 GOLGA3Q08378 1498 aa16.55■□□□□ 0.24
DDX23-215ENST00000552555 CEP164Q9UPV0 1460 aa16.55■□□□□ 0.24
DDX23-215ENST00000552555 DNMBPQ6XZF7 1577 aa16.54■□□□□ 0.24
DDX23-215ENST00000552555 KIF27Q86VH2 1401 aa16.53■□□□□ 0.24
DDX23-215ENST00000552555 FGD5Q6ZNL6 1462 aa16.5■□□□□ 0.23
DDX23-215ENST00000552555 TOPBP1Q92547 1522 aa16.5■□□□□ 0.23
DDX23-215ENST00000552555 PRXQ9BXM0 1461 aa16.49■□□□□ 0.23
DDX23-215ENST00000552555 ERICH3Q5RHP9 1530 aa16.46■□□□□ 0.23
DDX23-215ENST00000552555 URB2Q14146 1524 aaKnown RBP16.45■□□□□ 0.22
DDX23-215ENST00000552555 ABCA10Q8WWZ4 1543 aa16.43■□□□□ 0.22
DDX23-215ENST00000552555 POLA1P09884 1462 aaPredicted RBP16.42■□□□□ 0.22
DDX23-215ENST00000552555 CEP162Q5TB80 1403 aa16.42■□□□□ 0.22
DDX23-215ENST00000552555 RAPGEF2Q9Y4G8 1499 aa16.42■□□□□ 0.22
DDX23-215ENST00000552555 CUX2O14529 1486 aa16.41■□□□□ 0.22
DDX23-215ENST00000552555 IGF1RP08069 1367 aa16.39■□□□□ 0.21
DDX23-215ENST00000552555 EHMT2Q96KQ7 1210 aa16.38■□□□□ 0.21
DDX23-215ENST00000552555 UBTFP17480 764 aaKnown RBP16.36■□□□□ 0.21
DDX23-215ENST00000552555 KIF21AQ7Z4S6 1674 aa16.35■□□□□ 0.21
DDX23-215ENST00000552555 MRC2Q9UBG0 1479 aa16.33■□□□□ 0.2
DDX23-215ENST00000552555 RAD54L2Q9Y4B4 1467 aa16.33■□□□□ 0.2
DDX23-215ENST00000552555 WDR97A6NE52 1622 aa16.3■□□□□ 0.2
DDX23-215ENST00000552555 CARMIL1Q5VZK9 1371 aa16.28■□□□□ 0.2
DDX23-215ENST00000552555 CLIP1P30622 1438 aa16.27■□□□□ 0.19
DDX23-215ENST00000552555 WDR62O43379 1518 aa16.26■□□□□ 0.19
DDX23-215ENST00000552555 TRIM26Q12899 539 aaPredicted RBP16.25■□□□□ 0.19
DDX23-215ENST00000552555 TARBP1Q13395 1621 aaKnown RBP16.25■□□□□ 0.19
DDX23-215ENST00000552555 ABCA5Q8WWZ7 1642 aa16.24■□□□□ 0.19
DDX23-215ENST00000552555 CUL7Q14999 1698 aa16.21■□□□□ 0.18
DDX23-215ENST00000552555 GAPVD1Q14C86 1478 aa16.19■□□□□ 0.18
DDX23-215ENST00000552555 VPS8Q8N3P4 1428 aa16.18■□□□□ 0.18
DDX23-215ENST00000552555 IFT140Q96RY7 1462 aa16.17■□□□□ 0.18
DDX23-215ENST00000552555 PCGF6Q9BYE7 350 aa16.17■□□□□ 0.18
DDX23-215ENST00000552555 TDRD9Q8NDG6 1382 aaKnown RBP16.15■□□□□ 0.18
DDX23-215ENST00000552555 THOC2Q8NI27 1593 aaKnown RBP16.14■□□□□ 0.17
DDX23-215ENST00000552555 ERCC6Q03468 1493 aa16.12■□□□□ 0.17
DDX23-215ENST00000552555 ARAP1Q96P48 1450 aa16.12■□□□□ 0.17
DDX23-215ENST00000552555 ARHGAP35Q9NRY4 1499 aa16.1■□□□□ 0.17
DDX23-215ENST00000552555 GRIN2BQ13224 1484 aa16.07■□□□□ 0.16
DDX23-215ENST00000552555 FHAD1B1AJZ9 1412 aa16.06■□□□□ 0.16
DDX23-215ENST00000552555 AQRO60306 1485 aaKnown RBP eCLIP16.03■□□□□ 0.16
DDX23-215ENST00000552555 ADAMTS12P58397 1594 aa16.01■□□□□ 0.15
DDX23-215ENST00000552555 EFCAB5A4FU69 1503 aa16.01■□□□□ 0.15
DDX23-215ENST00000552555 ZNF608Q9ULD9 1512 aaPredicted RBP16.01■□□□□ 0.15
DDX23-215ENST00000552555 PBRM1Q86U86 1689 aa16.01■□□□□ 0.15
DDX23-215ENST00000552555 CTTNBP2Q8WZ74 1663 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms