RNA–Protein interactions for RNA: ENST00000552512.5

DDX23-214, Transcript of DEAD-box helicase 23, humanhuman

TSL 4

Gene DDX23, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-214ENST00000552512 NISCHQ9Y2I1 1504 aa24.07■■□□□ 1.44
DDX23-214ENST00000552512 CCDC180Q9P1Z9 1646 aa21.47■■□□□ 1.03
DDX23-214ENST00000552512 ABCC9O60706 1549 aa21.29■■□□□ 1
DDX23-214ENST00000552512 RB1CC1Q8TDY2 1594 aa20.34■□□□□ 0.85
DDX23-214ENST00000552512 DCAF8L2P0C7V8 631 aa20.3■□□□□ 0.84
DDX23-214ENST00000552512 NACADO15069 1562 aa20.25■□□□□ 0.83
DDX23-214ENST00000552512 MYO15BQ96JP2 1530 aa20.02■□□□□ 0.79
DDX23-214ENST00000552512 ZCCHC6Q5VYS8 1495 aaKnown RBP19.96■□□□□ 0.79
DDX23-214ENST00000552512 UNC13AQ9UPW8 1703 aa19.95■□□□□ 0.78
DDX23-214ENST00000552512 PABPN1Q86U42 306 aaKnown RBP eCLIP19.9■□□□□ 0.78
DDX23-214ENST00000552512 DCAF1Q9Y4B6 1507 aa19.86■□□□□ 0.77
DDX23-214ENST00000552512 DNAJC5BQ9UF47 199 aa19.84■□□□□ 0.77
DDX23-214ENST00000552512 BICRAQ9NZM4 1560 aa19.77■□□□□ 0.76
DDX23-214ENST00000552512 SCRIBQ14160 1630 aa19.6■□□□□ 0.73
DDX23-214ENST00000552512 SHROOM4Q9ULL8 1493 aa19.41■□□□□ 0.7
DDX23-214ENST00000552512 CC2D2AQ9P2K1 1620 aa19.24■□□□□ 0.67
DDX23-214ENST00000552512 EIF4G1Q04637 1599 aaKnown RBP19.23■□□□□ 0.67
DDX23-214ENST00000552512 CECR2Q9BXF3 1484 aa19.13■□□□□ 0.65
DDX23-214ENST00000552512 SMARCA4P51532 1647 aa18.72■□□□□ 0.59
DDX23-214ENST00000552512 NCAPD3P42695 1498 aa18.71■□□□□ 0.59
DDX23-214ENST00000552512 ATAD2BQ9ULI0 1458 aa18.68■□□□□ 0.58
DDX23-214ENST00000552512 BAZ1AQ9NRL2 1556 aaPredicted RBP18.64■□□□□ 0.58
DDX23-214ENST00000552512 SMARCA2P51531 1590 aa18.62■□□□□ 0.57
DDX23-214ENST00000552512 MROH2BQ7Z745 1585 aa18.57■□□□□ 0.56
DDX23-214ENST00000552512 HMGXB3Q12766 1538 aa18.54■□□□□ 0.56
DDX23-214ENST00000552512 PEG3Q9GZU2 1588 aa18.51■□□□□ 0.55
DDX23-214ENST00000552512 BAZ1BQ9UIG0 1483 aaKnown RBP18.49■□□□□ 0.55
DDX23-214ENST00000552512 WIZO95785 1651 aa18.38■□□□□ 0.53
DDX23-214ENST00000552512 NESP48681 1621 aa18.38■□□□□ 0.53
DDX23-214ENST00000552512 ERCC6Q03468 1493 aa18.33■□□□□ 0.52
DDX23-214ENST00000552512 RSF1Q96T23 1441 aaPredicted RBP18.26■□□□□ 0.51
DDX23-214ENST00000552512 LAMC3Q9Y6N6 1575 aa18.23■□□□□ 0.51
DDX23-214ENST00000552512 CUX2O14529 1486 aa18.2■□□□□ 0.5
DDX23-214ENST00000552512 CADPSQ9ULU8 1353 aa18.16■□□□□ 0.5
DDX23-214ENST00000552512 KIF21AQ7Z4S6 1674 aa18.14■□□□□ 0.49
DDX23-214ENST00000552512 PDS5BQ9NTI5 1447 aa18.11■□□□□ 0.49
DDX23-214ENST00000552512 TOP2AP11388 1531 aaKnown RBP18.1■□□□□ 0.49
DDX23-214ENST00000552512 THOC2Q8NI27 1593 aaKnown RBP18.08■□□□□ 0.49
DDX23-214ENST00000552512 DNAJC5Q9H3Z4 198 aa18.01■□□□□ 0.47
DDX23-214ENST00000552512 CFTRP13569 1480 aa17.98■□□□□ 0.47
DDX23-214ENST00000552512 MRC2Q9UBG0 1479 aa17.95■□□□□ 0.46
DDX23-214ENST00000552512 CCDC88BA6NC98 1476 aa17.94■□□□□ 0.46
DDX23-214ENST00000552512 FANCD2Q9BXW9 1451 aa17.94■□□□□ 0.46
DDX23-214ENST00000552512 CEP164Q9UPV0 1460 aa17.91■□□□□ 0.46
DDX23-214ENST00000552512 WDR62O43379 1518 aa17.88■□□□□ 0.45
DDX23-214ENST00000552512 PRDM2Q13029 1718 aa17.84■□□□□ 0.45
DDX23-214ENST00000552512 URB2Q14146 1524 aaKnown RBP17.78■□□□□ 0.44
DDX23-214ENST00000552512 SUPT5HO00267 1087 aaKnown RBP17.68■□□□□ 0.42
DDX23-214ENST00000552512 TOPBP1Q92547 1522 aa17.63■□□□□ 0.41
DDX23-214ENST00000552512 ABCC8Q09428 1581 aa17.59■□□□□ 0.41
DDX23-214ENST00000552512 DNMBPQ6XZF7 1577 aa17.57■□□□□ 0.4
DDX23-214ENST00000552512 IFT140Q96RY7 1462 aa17.55■□□□□ 0.4
DDX23-214ENST00000552512 ZNF608Q9ULD9 1512 aaPredicted RBP17.54■□□□□ 0.4
DDX23-214ENST00000552512 OSCARQ8IYS5 282 aa17.48■□□□□ 0.39
DDX23-214ENST00000552512 TARBP1Q13395 1621 aaKnown RBP17.47■□□□□ 0.39
DDX23-214ENST00000552512 POLA1P09884 1462 aaPredicted RBP17.45■□□□□ 0.38
DDX23-214ENST00000552512 RAD54L2Q9Y4B4 1467 aa17.43■□□□□ 0.38
DDX23-214ENST00000552512 AQRO60306 1485 aaKnown RBP eCLIP17.42■□□□□ 0.381e-7■■□□□ 12.9
DDX23-214ENST00000552512 CUX1P39880 1505 aa17.42■□□□□ 0.38
DDX23-214ENST00000552512 EIF4G3O43432 1585 aaKnown RBP17.41■□□□□ 0.38
DDX23-214ENST00000552512 SOGA1O94964 1423 aa17.41■□□□□ 0.38
DDX23-214ENST00000552512 FGD5Q6ZNL6 1462 aa17.39■□□□□ 0.37
DDX23-214ENST00000552512 TDRD9Q8NDG6 1382 aaKnown RBP17.36■□□□□ 0.37
DDX23-214ENST00000552512 TRIM41Q8WV44 630 aa17.31■□□□□ 0.36
DDX23-214ENST00000552512 CHD1O14646 1710 aa17.3■□□□□ 0.36
DDX23-214ENST00000552512 FBLN2P98095 1184 aa17.28■□□□□ 0.36
DDX23-214ENST00000552512 WDR97A6NE52 1622 aa17.25■□□□□ 0.35
DDX23-214ENST00000552512 SNAPC4Q5SXM2 1469 aa17.21■□□□□ 0.35
DDX23-214ENST00000552512 RIMBP3CA6NJZ7 1639 aa17.21■□□□□ 0.35
DDX23-214ENST00000552512 RIMBP3BA6NNM3 1639 aa17.21■□□□□ 0.35
DDX23-214ENST00000552512 RIMBP3Q9UFD9 1639 aa17.21■□□□□ 0.35
DDX23-214ENST00000552512 WRNQ14191 1432 aaPredicted RBP eCLIP17.21■□□□□ 0.34
DDX23-214ENST00000552512 BIVM-ERCC5R4GMW8 1640 aa17.2■□□□□ 0.34
DDX23-214ENST00000552512 GRIN2BQ13224 1484 aa17.19■□□□□ 0.34
DDX23-214ENST00000552512 TOP2BQ02880 1626 aa17.19■□□□□ 0.34
DDX23-214ENST00000552512 ABCA10Q8WWZ4 1543 aa17.19■□□□□ 0.34
DDX23-214ENST00000552512 SYNJ1O43426 1573 aa17.19■□□□□ 0.34
DDX23-214ENST00000552512 GAPVD1Q14C86 1478 aa17.18■□□□□ 0.34
DDX23-214ENST00000552512 PBRM1Q86U86 1689 aa17.17■□□□□ 0.34
DDX23-214ENST00000552512 CHMP7Q8WUX9 453 aaPredicted RBP17.17■□□□□ 0.34
DDX23-214ENST00000552512 MAGI1Q96QZ7 1491 aaPredicted RBP17.16■□□□□ 0.34
DDX23-214ENST00000552512 ARHGEF11O15085 1522 aa17.16■□□□□ 0.34
DDX23-214ENST00000552512 ABCA5Q8WWZ7 1642 aa17.14■□□□□ 0.33
DDX23-214ENST00000552512 SYNJ2O15056 1496 aa17.11■□□□□ 0.33
DDX23-214ENST00000552512 CYB5RLQ6IPT4 315 aa17.08■□□□□ 0.32
DDX23-214ENST00000552512 CLASP1Q7Z460 1538 aa17.06■□□□□ 0.32
DDX23-214ENST00000552512 ARAP1Q96P48 1450 aa17■□□□□ 0.31
DDX23-214ENST00000552512 ADAMTS12P58397 1594 aa16.98■□□□□ 0.31
DDX23-214ENST00000552512 GRIN2AQ12879 1464 aa16.98■□□□□ 0.31
DDX23-214ENST00000552512 FHAD1B1AJZ9 1412 aa16.96■□□□□ 0.31
DDX23-214ENST00000552512 ERICH3Q5RHP9 1530 aa16.96■□□□□ 0.31
DDX23-214ENST00000552512 CEP170Q5SW79 1584 aa16.92■□□□□ 0.3
DDX23-214ENST00000552512 NUP160Q12769 1436 aa16.91■□□□□ 0.3
DDX23-214ENST00000552512 IGF1RP08069 1367 aa16.86■□□□□ 0.29
DDX23-214ENST00000552512 KIF27Q86VH2 1401 aa16.86■□□□□ 0.29
DDX23-214ENST00000552512 ERCC6L2Q5T890 1561 aa16.85■□□□□ 0.29
DDX23-214ENST00000552512 SHROOM2Q13796 1616 aa16.82■□□□□ 0.28
DDX23-214ENST00000552512 TRHP20396 242 aaPredicted RBP16.8■□□□□ 0.28
DDX23-214ENST00000552512 JPH4Q96JJ6 628 aa16.8■□□□□ 0.28
DDX23-214ENST00000552512 CUL7Q14999 1698 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms