RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 NISCHQ9Y2I1 1504 aa28.98■■■□□ 2.23
CACNB3-223ENST00000552480 CCDC180Q9P1Z9 1646 aa25.36■■□□□ 1.65
CACNB3-223ENST00000552480 ZCCHC6Q5VYS8 1495 aaKnown RBP24.35■■□□□ 1.49
CACNB3-223ENST00000552480 DCAF1Q9Y4B6 1507 aa24.01■■□□□ 1.43
CACNB3-223ENST00000552480 ABCC9O60706 1549 aa23.9■■□□□ 1.42
CACNB3-223ENST00000552480 DCAF8L2P0C7V8 631 aa23.79■■□□□ 1.4
CACNB3-223ENST00000552480 MYO15BQ96JP2 1530 aa23.75■■□□□ 1.39
CACNB3-223ENST00000552480 NACADO15069 1562 aa23.6■■□□□ 1.37
CACNB3-223ENST00000552480 SHROOM4Q9ULL8 1493 aa23.49■■□□□ 1.35
CACNB3-223ENST00000552480 RB1CC1Q8TDY2 1594 aa23.4■■□□□ 1.34
CACNB3-223ENST00000552480 SCRIBQ14160 1630 aa23.24■■□□□ 1.31
CACNB3-223ENST00000552480 UNC13AQ9UPW8 1703 aa22.91■■□□□ 1.26
CACNB3-223ENST00000552480 BICRAQ9NZM4 1560 aa22.67■■□□□ 1.22
CACNB3-223ENST00000552480 SUPT5HO00267 1087 aaKnown RBP22.56■■□□□ 1.2
CACNB3-223ENST00000552480 PABPN1Q86U42 306 aaKnown RBP eCLIP22.48■■□□□ 1.19
CACNB3-223ENST00000552480 CECR2Q9BXF3 1484 aa22.47■■□□□ 1.19
CACNB3-223ENST00000552480 RSF1Q96T23 1441 aaPredicted RBP22.43■■□□□ 1.18
CACNB3-223ENST00000552480 BAZ1AQ9NRL2 1556 aaPredicted RBP22.39■■□□□ 1.18
CACNB3-223ENST00000552480 MROH2BQ7Z745 1585 aa22.36■■□□□ 1.17
CACNB3-223ENST00000552480 SMARCA4P51532 1647 aa22.3■■□□□ 1.16
CACNB3-223ENST00000552480 WIZO95785 1651 aa22.18■■□□□ 1.14
CACNB3-223ENST00000552480 PEG3Q9GZU2 1588 aa22.05■■□□□ 1.12
CACNB3-223ENST00000552480 TOP2AP11388 1531 aaKnown RBP22■■□□□ 1.11
CACNB3-223ENST00000552480 EIF4G1Q04637 1599 aaKnown RBP21.99■■□□□ 1.11
CACNB3-223ENST00000552480 SMARCA2P51531 1590 aa21.95■■□□□ 1.1
CACNB3-223ENST00000552480 ATAD2BQ9ULI0 1458 aa21.91■■□□□ 1.1
CACNB3-223ENST00000552480 BAZ1BQ9UIG0 1483 aaKnown RBP21.8■■□□□ 1.08
CACNB3-223ENST00000552480 HMGXB3Q12766 1538 aa21.76■■□□□ 1.07
CACNB3-223ENST00000552480 NCAPD3P42695 1498 aa21.75■■□□□ 1.07
CACNB3-223ENST00000552480 CCDC88BA6NC98 1476 aa21.71■■□□□ 1.07
CACNB3-223ENST00000552480 CC2D2AQ9P2K1 1620 aa21.67■■□□□ 1.06
CACNB3-223ENST00000552480 CHIC1Q5VXU3 224 aa21.62■■□□□ 1.05
CACNB3-223ENST00000552480 DNAJC5BQ9UF47 199 aa21.27■■□□□ 1
CACNB3-223ENST00000552480 CFTRP13569 1480 aa21.26■□□□□ 0.99
CACNB3-223ENST00000552480 TRIM41Q8WV44 630 aa21.25■□□□□ 0.99
CACNB3-223ENST00000552480 ABCC8Q09428 1581 aa21.23■□□□□ 0.99
CACNB3-223ENST00000552480 PRDM2Q13029 1718 aa21.21■□□□□ 0.99
CACNB3-223ENST00000552480 CADPSQ9ULU8 1353 aa21.16■□□□□ 0.98
CACNB3-223ENST00000552480 WRNQ14191 1432 aaPredicted RBP eCLIP21.12■□□□□ 0.97
CACNB3-223ENST00000552480 SYNJ1O43426 1573 aa21.06■□□□□ 0.96
CACNB3-223ENST00000552480 LAMC3Q9Y6N6 1575 aa21.04■□□□□ 0.96
CACNB3-223ENST00000552480 TOP2BQ02880 1626 aa21■□□□□ 0.95
CACNB3-223ENST00000552480 BIVM-ERCC5R4GMW8 1640 aa21■□□□□ 0.95
CACNB3-223ENST00000552480 NESP48681 1621 aa20.97■□□□□ 0.95
CACNB3-223ENST00000552480 FANCD2Q9BXW9 1451 aa20.94■□□□□ 0.94
CACNB3-223ENST00000552480 CUX1P39880 1505 aa20.93■□□□□ 0.94
CACNB3-223ENST00000552480 PDS5BQ9NTI5 1447 aa20.85■□□□□ 0.93
CACNB3-223ENST00000552480 EEA1Q15075 1411 aa20.84■□□□□ 0.93
CACNB3-223ENST00000552480 CEP164Q9UPV0 1460 aa20.83■□□□□ 0.93
CACNB3-223ENST00000552480 FAM9AQ8IZU1 332 aaPredicted RBP20.82■□□□□ 0.92
CACNB3-223ENST00000552480 SOGA1O94964 1423 aa20.81■□□□□ 0.92
CACNB3-223ENST00000552480 DNMBPQ6XZF7 1577 aa20.79■□□□□ 0.92
CACNB3-223ENST00000552480 KIF21AQ7Z4S6 1674 aa20.77■□□□□ 0.92
CACNB3-223ENST00000552480 LOC105371045A0A1W2PR82 267 aa20.73■□□□□ 0.91
CACNB3-223ENST00000552480 RUSC2Q8N2Y8 1516 aa20.73■□□□□ 0.91
CACNB3-223ENST00000552480 TOPBP1Q92547 1522 aa20.72■□□□□ 0.91
CACNB3-223ENST00000552480 FGD5Q6ZNL6 1462 aa20.7■□□□□ 0.9
CACNB3-223ENST00000552480 URB2Q14146 1524 aaKnown RBP20.68■□□□□ 0.9
CACNB3-223ENST00000552480 CSRNP3Q8WYN3 585 aa20.65■□□□□ 0.9
CACNB3-223ENST00000552480 POLA1P09884 1462 aaPredicted RBP20.61■□□□□ 0.89
CACNB3-223ENST00000552480 MRC2Q9UBG0 1479 aa20.61■□□□□ 0.89
CACNB3-223ENST00000552480 KIF27Q86VH2 1401 aa20.6■□□□□ 0.89
CACNB3-223ENST00000552480 KIF21BO75037 1637 aa20.58■□□□□ 0.89
CACNB3-223ENST00000552480 CUX2O14529 1486 aa20.55■□□□□ 0.88
CACNB3-223ENST00000552480 ABCA10Q8WWZ4 1543 aa20.54■□□□□ 0.88
CACNB3-223ENST00000552480 GOLGA3Q08378 1498 aa20.53■□□□□ 0.88
CACNB3-223ENST00000552480 ERCC6Q03468 1493 aa20.52■□□□□ 0.88
CACNB3-223ENST00000552480 WDR97A6NE52 1622 aa20.52■□□□□ 0.88
CACNB3-223ENST00000552480 RAD54L2Q9Y4B4 1467 aa20.51■□□□□ 0.87
CACNB3-223ENST00000552480 WDR62O43379 1518 aa20.51■□□□□ 0.87
CACNB3-223ENST00000552480 EHMT2Q96KQ7 1210 aa20.49■□□□□ 0.87
CACNB3-223ENST00000552480 THOC2Q8NI27 1593 aaKnown RBP20.46■□□□□ 0.87
CACNB3-223ENST00000552480 PRXQ9BXM0 1461 aa20.45■□□□□ 0.86
CACNB3-223ENST00000552480 ERICH3Q5RHP9 1530 aa20.45■□□□□ 0.86
CACNB3-223ENST00000552480 TNIKQ9UKE5 1360 aa20.44■□□□□ 0.86
CACNB3-223ENST00000552480 TARBP1Q13395 1621 aaKnown RBP20.43■□□□□ 0.86
CACNB3-223ENST00000552480 RAPGEF2Q9Y4G8 1499 aa20.41■□□□□ 0.86
CACNB3-223ENST00000552480 ABCA5Q8WWZ7 1642 aa20.39■□□□□ 0.86
CACNB3-223ENST00000552480 IGF1RP08069 1367 aa20.39■□□□□ 0.85
CACNB3-223ENST00000552480 UBTFP17480 764 aaKnown RBP20.35■□□□□ 0.85
CACNB3-223ENST00000552480 IFT140Q96RY7 1462 aa20.35■□□□□ 0.85
CACNB3-223ENST00000552480 CUL7Q14999 1698 aa20.32■□□□□ 0.84
CACNB3-223ENST00000552480 GAPVD1Q14C86 1478 aa20.31■□□□□ 0.84
CACNB3-223ENST00000552480 CEP162Q5TB80 1403 aa20.31■□□□□ 0.84
CACNB3-223ENST00000552480 CARMIL1Q5VZK9 1371 aa20.3■□□□□ 0.84
CACNB3-223ENST00000552480 TDRD9Q8NDG6 1382 aaKnown RBP20.29■□□□□ 0.84
CACNB3-223ENST00000552480 PBRM1Q86U86 1689 aa20.25■□□□□ 0.83
CACNB3-223ENST00000552480 AQRO60306 1485 aaKnown RBP eCLIP20.18■□□□□ 0.82
CACNB3-223ENST00000552480 ZNF608Q9ULD9 1512 aaPredicted RBP20.18■□□□□ 0.82
CACNB3-223ENST00000552480 GRIN2BQ13224 1484 aa20.18■□□□□ 0.82
CACNB3-223ENST00000552480 CLIP1P30622 1438 aa20.17■□□□□ 0.82
CACNB3-223ENST00000552480 EIF4G3O43432 1585 aaKnown RBP20.17■□□□□ 0.82
CACNB3-223ENST00000552480 ADAMTS12P58397 1594 aa20.13■□□□□ 0.81
CACNB3-223ENST00000552480 FHAD1B1AJZ9 1412 aa20.1■□□□□ 0.81
CACNB3-223ENST00000552480 CTTNBP2Q8WZ74 1663 aa20.09■□□□□ 0.81
CACNB3-223ENST00000552480 SNAPC4Q5SXM2 1469 aa20.04■□□□□ 0.8
CACNB3-223ENST00000552480 MAGI1Q96QZ7 1491 aaPredicted RBP20.02■□□□□ 0.8
CACNB3-223ENST00000552480 VPS8Q8N3P4 1428 aa20.01■□□□□ 0.79
CACNB3-223ENST00000552480 ARAP1Q96P48 1450 aa20■□□□□ 0.79
CACNB3-223ENST00000552480 ARHGAP35Q9NRY4 1499 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms