RNA–Protein interactions for RNA: ENST00000552310.5

RACGAP1-227, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 3

Gene RACGAP1, Length 932 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-227ENST00000552310 NISCHQ9Y2I1 1504 aa37.62■■■■□ 3.61
RACGAP1-227ENST00000552310 ABCC9O60706 1549 aa34.14■■■■□ 3.06
RACGAP1-227ENST00000552310 CCDC180Q9P1Z9 1646 aa33.76■■■■□ 3
RACGAP1-227ENST00000552310 RB1CC1Q8TDY2 1594 aa32.3■■■□□ 2.76
RACGAP1-227ENST00000552310 DNAJC5BQ9UF47 199 aa32.3■■■□□ 2.76
RACGAP1-227ENST00000552310 DCAF8L2P0C7V8 631 aa32.05■■■□□ 2.72
RACGAP1-227ENST00000552310 NACADO15069 1562 aa32.02■■■□□ 2.72
RACGAP1-227ENST00000552310 PABPN1Q86U42 306 aaKnown RBP eCLIP31.84■■■□□ 2.69
RACGAP1-227ENST00000552310 UNC13AQ9UPW8 1703 aa31.59■■■□□ 2.65
RACGAP1-227ENST00000552310 MYO15BQ96JP2 1530 aa31.44■■■□□ 2.62
RACGAP1-227ENST00000552310 BICRAQ9NZM4 1560 aa31.4■■■□□ 2.62
RACGAP1-227ENST00000552310 ZCCHC6Q5VYS8 1495 aaKnown RBP31.1■■■□□ 2.57
RACGAP1-227ENST00000552310 DCAF1Q9Y4B6 1507 aa30.98■■■□□ 2.55
RACGAP1-227ENST00000552310 SCRIBQ14160 1630 aa30.87■■■□□ 2.53
RACGAP1-227ENST00000552310 SHROOM4Q9ULL8 1493 aa30.82■■■□□ 2.52
RACGAP1-227ENST00000552310 CC2D2AQ9P2K1 1620 aa30.78■■■□□ 2.52
RACGAP1-227ENST00000552310 CECR2Q9BXF3 1484 aa30.75■■■□□ 2.51
RACGAP1-227ENST00000552310 EIF4G1Q04637 1599 aaKnown RBP30.63■■■□□ 2.49
RACGAP1-227ENST00000552310 DNAJC5Q9H3Z4 198 aa29.76■■■□□ 2.35
RACGAP1-227ENST00000552310 NCAPD3P42695 1498 aa29.59■■■□□ 2.33
RACGAP1-227ENST00000552310 ATAD2BQ9ULI0 1458 aa29.49■■■□□ 2.31
RACGAP1-227ENST00000552310 ERCC6Q03468 1493 aa29.46■■■□□ 2.31
RACGAP1-227ENST00000552310 CUX2O14529 1486 aa29.42■■■□□ 2.3
RACGAP1-227ENST00000552310 SMARCA4P51532 1647 aa29.38■■■□□ 2.29
RACGAP1-227ENST00000552310 SMARCA2P51531 1590 aa29.35■■■□□ 2.29
RACGAP1-227ENST00000552310 HMGXB3Q12766 1538 aa29.3■■■□□ 2.28
RACGAP1-227ENST00000552310 NESP48681 1621 aa29.27■■■□□ 2.28
RACGAP1-227ENST00000552310 BAZ1AQ9NRL2 1556 aaPredicted RBP29.18■■■□□ 2.26
RACGAP1-227ENST00000552310 BAZ1BQ9UIG0 1483 aaKnown RBP29.18■■■□□ 2.26
RACGAP1-227ENST00000552310 PEG3Q9GZU2 1588 aa29.04■■■□□ 2.24
RACGAP1-227ENST00000552310 MROH2BQ7Z745 1585 aa29.03■■■□□ 2.24
RACGAP1-227ENST00000552310 THOC2Q8NI27 1593 aaKnown RBP28.92■■■□□ 2.22
RACGAP1-227ENST00000552310 LAMC3Q9Y6N6 1575 aa28.92■■■□□ 2.22
RACGAP1-227ENST00000552310 KIF21AQ7Z4S6 1674 aa28.83■■■□□ 2.21
RACGAP1-227ENST00000552310 PDS5BQ9NTI5 1447 aa28.81■■■□□ 2.2
RACGAP1-227ENST00000552310 CADPSQ9ULU8 1353 aa28.72■■■□□ 2.19
RACGAP1-227ENST00000552310 WIZO95785 1651 aa28.67■■■□□ 2.18
RACGAP1-227ENST00000552310 MRC2Q9UBG0 1479 aa28.57■■■□□ 2.16
RACGAP1-227ENST00000552310 WDR62O43379 1518 aa28.48■■■□□ 2.15
RACGAP1-227ENST00000552310 TRIM41Q8WV44 630 aa28.44■■■□□ 2.14
RACGAP1-227ENST00000552310 CEP164Q9UPV0 1460 aa28.41■■■□□ 2.14
RACGAP1-227ENST00000552310 FANCD2Q9BXW9 1451 aa28.39■■■□□ 2.13
RACGAP1-227ENST00000552310 RSF1Q96T23 1441 aaPredicted RBP28.35■■■□□ 2.13
RACGAP1-227ENST00000552310 CFTRP13569 1480 aa28.31■■■□□ 2.12
RACGAP1-227ENST00000552310 TOP2AP11388 1531 aaKnown RBP28.23■■■□□ 2.11
RACGAP1-227ENST00000552310 URB2Q14146 1524 aaKnown RBP28.18■■■□□ 2.1
RACGAP1-227ENST00000552310 OSCARQ8IYS5 282 aa28.14■■■□□ 2.1
RACGAP1-227ENST00000552310 CCDC88BA6NC98 1476 aa27.98■■■□□ 2.07
RACGAP1-227ENST00000552310 PRDM2Q13029 1718 aa27.94■■■□□ 2.06
RACGAP1-227ENST00000552310 ZNF608Q9ULD9 1512 aaPredicted RBP27.89■■■□□ 2.06
RACGAP1-227ENST00000552310 IFT140Q96RY7 1462 aa27.84■■■□□ 2.05
RACGAP1-227ENST00000552310 TOPBP1Q92547 1522 aa27.82■■■□□ 2.04
RACGAP1-227ENST00000552310 RIMBP3CA6NJZ7 1639 aa27.75■■■□□ 2.03
RACGAP1-227ENST00000552310 RIMBP3BA6NNM3 1639 aa27.75■■■□□ 2.03
RACGAP1-227ENST00000552310 RIMBP3Q9UFD9 1639 aa27.75■■■□□ 2.03
RACGAP1-227ENST00000552310 ABCC8Q09428 1581 aa27.69■■■□□ 2.02
RACGAP1-227ENST00000552310 DNMBPQ6XZF7 1577 aa27.66■■■□□ 2.02
RACGAP1-227ENST00000552310 EIF4G3O43432 1585 aaKnown RBP27.65■■■□□ 2.02
RACGAP1-227ENST00000552310 ARHGEF11O15085 1522 aa27.63■■■□□ 2.01
RACGAP1-227ENST00000552310 AQRO60306 1485 aaKnown RBP eCLIP27.63■■■□□ 2.019e-7■■□□□ 12.9
RACGAP1-227ENST00000552310 TARBP1Q13395 1621 aaKnown RBP27.56■■■□□ 2
RACGAP1-227ENST00000552310 CYB5RLQ6IPT4 315 aa27.56■■■□□ 2
RACGAP1-227ENST00000552310 FBLN2P98095 1184 aa27.55■■■□□ 2
RACGAP1-227ENST00000552310 POLA1P09884 1462 aaPredicted RBP27.51■■■□□ 2
RACGAP1-227ENST00000552310 CHD1O14646 1710 aa27.51■■□□□ 1.99
RACGAP1-227ENST00000552310 RAD54L2Q9Y4B4 1467 aa27.49■■□□□ 1.99
RACGAP1-227ENST00000552310 TDRD9Q8NDG6 1382 aaKnown RBP27.44■■□□□ 1.98
RACGAP1-227ENST00000552310 SOGA1O94964 1423 aa27.43■■□□□ 1.98
RACGAP1-227ENST00000552310 ARAP1Q96P48 1450 aa27.35■■□□□ 1.97
RACGAP1-227ENST00000552310 TRHP20396 242 aaPredicted RBP27.33■■□□□ 1.97
RACGAP1-227ENST00000552310 FGD5Q6ZNL6 1462 aa27.32■■□□□ 1.96
RACGAP1-227ENST00000552310 SNAPC4Q5SXM2 1469 aa27.3■■□□□ 1.96
RACGAP1-227ENST00000552310 CUX1P39880 1505 aa27.27■■□□□ 1.96
RACGAP1-227ENST00000552310 CHMP7Q8WUX9 453 aaPredicted RBP27.26■■□□□ 1.95
RACGAP1-227ENST00000552310 WDR97A6NE52 1622 aa27.18■■□□□ 1.94
RACGAP1-227ENST00000552310 GRIN2BQ13224 1484 aa27.17■■□□□ 1.94
RACGAP1-227ENST00000552310 CLASP1Q7Z460 1538 aa27.16■■□□□ 1.94
RACGAP1-227ENST00000552310 MAGI1Q96QZ7 1491 aaPredicted RBP27.15■■□□□ 1.94
RACGAP1-227ENST00000552310 SYNJ1O43426 1573 aa27.14■■□□□ 1.93
RACGAP1-227ENST00000552310 SYNJ2O15056 1496 aa27.09■■□□□ 1.93
RACGAP1-227ENST00000552310 GAPVD1Q14C86 1478 aa27.06■■□□□ 1.92
RACGAP1-227ENST00000552310 SUPT5HO00267 1087 aaKnown RBP27.06■■□□□ 1.92
RACGAP1-227ENST00000552310 PBRM1Q86U86 1689 aa27.03■■□□□ 1.92
RACGAP1-227ENST00000552310 ABCA10Q8WWZ4 1543 aa26.96■■□□□ 1.91
RACGAP1-227ENST00000552310 ABCA5Q8WWZ7 1642 aa26.93■■□□□ 1.9
RACGAP1-227ENST00000552310 WRNQ14191 1432 aaPredicted RBP eCLIP26.83■■□□□ 1.89
RACGAP1-227ENST00000552310 GRIN2AQ12879 1464 aa26.81■■□□□ 1.88
RACGAP1-227ENST00000552310 ERCC6L2Q5T890 1561 aa26.81■■□□□ 1.88
RACGAP1-227ENST00000552310 ADAMTS12P58397 1594 aa26.75■■□□□ 1.87
RACGAP1-227ENST00000552310 CEP170Q5SW79 1584 aa26.74■■□□□ 1.87
RACGAP1-227ENST00000552310 TOP2BQ02880 1626 aa26.73■■□□□ 1.87
RACGAP1-227ENST00000552310 NUP160Q12769 1436 aa26.73■■□□□ 1.87
RACGAP1-227ENST00000552310 BIVM-ERCC5R4GMW8 1640 aa26.72■■□□□ 1.87
RACGAP1-227ENST00000552310 FHAD1B1AJZ9 1412 aa26.7■■□□□ 1.86
RACGAP1-227ENST00000552310 AEBP2Q6ZN18 517 aaPredicted RBP26.67■■□□□ 1.86
RACGAP1-227ENST00000552310 SHROOM2Q13796 1616 aa26.61■■□□□ 1.85
RACGAP1-227ENST00000552310 ERICH3Q5RHP9 1530 aa26.6■■□□□ 1.85
RACGAP1-227ENST00000552310 PRG4Q92954 1404 aaPredicted RBP26.55■■□□□ 1.84
RACGAP1-227ENST00000552310 JPH4Q96JJ6 628 aa26.54■■□□□ 1.84
RACGAP1-227ENST00000552310 KIF13AQ9H1H9 1805 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms