RNA–Protein interactions for RNA: ENST00000552282.1

CALCOCO1-220, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 569 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-220ENST00000552282 NISCHQ9Y2I1 1504 aa40.83■■■■■ 4.13
CALCOCO1-220ENST00000552282 CCDC180Q9P1Z9 1646 aa36.77■■■■□ 3.48
CALCOCO1-220ENST00000552282 ABCC9O60706 1549 aa36.44■■■■□ 3.42
CALCOCO1-220ENST00000552282 RB1CC1Q8TDY2 1594 aa34.88■■■■□ 3.17
CALCOCO1-220ENST00000552282 NACADO15069 1562 aa34.69■■■■□ 3.14
CALCOCO1-220ENST00000552282 MYO15BQ96JP2 1530 aa34.37■■■■□ 3.09
CALCOCO1-220ENST00000552282 DNAJC5BQ9UF47 199 aa34.14■■■■□ 3.06
CALCOCO1-220ENST00000552282 UNC13AQ9UPW8 1703 aa34.1■■■■□ 3.05
CALCOCO1-220ENST00000552282 DCAF8L2P0C7V8 631 aa34■■■■□ 3.03
CALCOCO1-220ENST00000552282 DCAF1Q9Y4B6 1507 aa33.89■■■■□ 3.02
CALCOCO1-220ENST00000552282 ZCCHC6Q5VYS8 1495 aaKnown RBP33.89■■■■□ 3.02
CALCOCO1-220ENST00000552282 BICRAQ9NZM4 1560 aa33.89■■■■□ 3.02
CALCOCO1-220ENST00000552282 PABPN1Q86U42 306 aaKnown RBP eCLIP33.81■■■■□ 3
CALCOCO1-220ENST00000552282 SHROOM4Q9ULL8 1493 aa33.62■■■□□ 2.97
CALCOCO1-220ENST00000552282 SCRIBQ14160 1630 aa33.26■■■□□ 2.91
CALCOCO1-220ENST00000552282 CC2D2AQ9P2K1 1620 aa33.04■■■□□ 2.88
CALCOCO1-220ENST00000552282 EIF4G1Q04637 1599 aaKnown RBP33.02■■■□□ 2.88
CALCOCO1-220ENST00000552282 CECR2Q9BXF3 1484 aa32.9■■■□□ 2.86
CALCOCO1-220ENST00000552282 NCAPD3P42695 1498 aa32.01■■■□□ 2.71
CALCOCO1-220ENST00000552282 SMARCA4P51532 1647 aa31.86■■■□□ 2.69
CALCOCO1-220ENST00000552282 ATAD2BQ9ULI0 1458 aa31.85■■■□□ 2.69
CALCOCO1-220ENST00000552282 HMGXB3Q12766 1538 aa31.83■■■□□ 2.69
CALCOCO1-220ENST00000552282 SMARCA2P51531 1590 aa31.81■■■□□ 2.68
CALCOCO1-220ENST00000552282 BAZ1AQ9NRL2 1556 aaPredicted RBP31.72■■■□□ 2.67
CALCOCO1-220ENST00000552282 PEG3Q9GZU2 1588 aa31.68■■■□□ 2.66
CALCOCO1-220ENST00000552282 CUX2O14529 1486 aa31.6■■■□□ 2.65
CALCOCO1-220ENST00000552282 BAZ1BQ9UIG0 1483 aaKnown RBP31.51■■■□□ 2.63
CALCOCO1-220ENST00000552282 ERCC6Q03468 1493 aa31.47■■■□□ 2.63
CALCOCO1-220ENST00000552282 DNAJC5Q9H3Z4 198 aa31.42■■■□□ 2.62
CALCOCO1-220ENST00000552282 MROH2BQ7Z745 1585 aa31.39■■■□□ 2.62
CALCOCO1-220ENST00000552282 NESP48681 1621 aa31.34■■■□□ 2.61
CALCOCO1-220ENST00000552282 LAMC3Q9Y6N6 1575 aa31.3■■■□□ 2.6
CALCOCO1-220ENST00000552282 THOC2Q8NI27 1593 aaKnown RBP31.19■■■□□ 2.58
CALCOCO1-220ENST00000552282 PDS5BQ9NTI5 1447 aa31.03■■■□□ 2.56
CALCOCO1-220ENST00000552282 KIF21AQ7Z4S6 1674 aa31.02■■■□□ 2.56
CALCOCO1-220ENST00000552282 WIZO95785 1651 aa31■■■□□ 2.55
CALCOCO1-220ENST00000552282 CADPSQ9ULU8 1353 aa30.95■■■□□ 2.55
CALCOCO1-220ENST00000552282 MRC2Q9UBG0 1479 aa30.77■■■□□ 2.52
CALCOCO1-220ENST00000552282 WDR62O43379 1518 aa30.77■■■□□ 2.52
CALCOCO1-220ENST00000552282 RSF1Q96T23 1441 aaPredicted RBP30.76■■■□□ 2.51
CALCOCO1-220ENST00000552282 TOP2AP11388 1531 aaKnown RBP30.71■■■□□ 2.51
CALCOCO1-220ENST00000552282 CFTRP13569 1480 aa30.67■■■□□ 2.5
CALCOCO1-220ENST00000552282 CEP164Q9UPV0 1460 aa30.63■■■□□ 2.49
CALCOCO1-220ENST00000552282 FANCD2Q9BXW9 1451 aa30.59■■■□□ 2.49
CALCOCO1-220ENST00000552282 PRDM2Q13029 1718 aa30.44■■■□□ 2.46
CALCOCO1-220ENST00000552282 URB2Q14146 1524 aaKnown RBP30.36■■■□□ 2.45
CALCOCO1-220ENST00000552282 CCDC88BA6NC98 1476 aa30.26■■■□□ 2.44
CALCOCO1-220ENST00000552282 IFT140Q96RY7 1462 aa30.06■■■□□ 2.4
CALCOCO1-220ENST00000552282 ABCC8Q09428 1581 aa30.04■■■□□ 2.4
CALCOCO1-220ENST00000552282 TOPBP1Q92547 1522 aa30.04■■■□□ 2.4
CALCOCO1-220ENST00000552282 DNMBPQ6XZF7 1577 aa29.97■■■□□ 2.39
CALCOCO1-220ENST00000552282 OSCARQ8IYS5 282 aa29.96■■■□□ 2.39
CALCOCO1-220ENST00000552282 ZNF608Q9ULD9 1512 aaPredicted RBP29.92■■■□□ 2.38
CALCOCO1-220ENST00000552282 EIF4G3O43432 1585 aaKnown RBP29.85■■■□□ 2.37
CALCOCO1-220ENST00000552282 TARBP1Q13395 1621 aaKnown RBP29.83■■■□□ 2.37
CALCOCO1-220ENST00000552282 TRIM41Q8WV44 630 aa29.8■■■□□ 2.36
CALCOCO1-220ENST00000552282 POLA1P09884 1462 aaPredicted RBP29.74■■■□□ 2.35
CALCOCO1-220ENST00000552282 RIMBP3CA6NJZ7 1639 aa29.68■■■□□ 2.34
CALCOCO1-220ENST00000552282 RIMBP3BA6NNM3 1639 aa29.68■■■□□ 2.34
CALCOCO1-220ENST00000552282 RIMBP3Q9UFD9 1639 aa29.68■■■□□ 2.34
CALCOCO1-220ENST00000552282 WDR97A6NE52 1622 aa29.66■■■□□ 2.34
CALCOCO1-220ENST00000552282 AQRO60306 1485 aaKnown RBP eCLIP29.61■■■□□ 2.331e-6■■■■■ 33.7
CALCOCO1-220ENST00000552282 ARHGEF11O15085 1522 aa29.61■■■□□ 2.33
CALCOCO1-220ENST00000552282 CHD1O14646 1710 aa29.59■■■□□ 2.33
CALCOCO1-220ENST00000552282 RAD54L2Q9Y4B4 1467 aa29.52■■■□□ 2.32
CALCOCO1-220ENST00000552282 SOGA1O94964 1423 aa29.52■■■□□ 2.32
CALCOCO1-220ENST00000552282 CUX1P39880 1505 aa29.51■■■□□ 2.32
CALCOCO1-220ENST00000552282 FGD5Q6ZNL6 1462 aa29.51■■■□□ 2.31
CALCOCO1-220ENST00000552282 TDRD9Q8NDG6 1382 aaKnown RBP29.39■■■□□ 2.3
CALCOCO1-220ENST00000552282 MAGI1Q96QZ7 1491 aaPredicted RBP29.39■■■□□ 2.3
CALCOCO1-220ENST00000552282 SNAPC4Q5SXM2 1469 aa29.37■■■□□ 2.29
CALCOCO1-220ENST00000552282 GRIN2BQ13224 1484 aa29.34■■■□□ 2.29
CALCOCO1-220ENST00000552282 CLASP1Q7Z460 1538 aa29.34■■■□□ 2.29
CALCOCO1-220ENST00000552282 ARAP1Q96P48 1450 aa29.31■■■□□ 2.28
CALCOCO1-220ENST00000552282 SYNJ1O43426 1573 aa29.26■■■□□ 2.28
CALCOCO1-220ENST00000552282 ABCA10Q8WWZ4 1543 aa29.26■■■□□ 2.27
CALCOCO1-220ENST00000552282 SYNJ2O15056 1496 aa29.26■■■□□ 2.27
CALCOCO1-220ENST00000552282 ABCA5Q8WWZ7 1642 aa29.25■■■□□ 2.27
CALCOCO1-220ENST00000552282 PBRM1Q86U86 1689 aa29.25■■■□□ 2.27
CALCOCO1-220ENST00000552282 FBLN2P98095 1184 aa29.22■■■□□ 2.27
CALCOCO1-220ENST00000552282 GAPVD1Q14C86 1478 aa29.2■■■□□ 2.26
CALCOCO1-220ENST00000552282 CYB5RLQ6IPT4 315 aa29.16■■■□□ 2.26
CALCOCO1-220ENST00000552282 BIVM-ERCC5R4GMW8 1640 aa29.14■■■□□ 2.26
CALCOCO1-220ENST00000552282 CHMP7Q8WUX9 453 aaPredicted RBP29.13■■■□□ 2.25
CALCOCO1-220ENST00000552282 TOP2BQ02880 1626 aa29.11■■■□□ 2.25
CALCOCO1-220ENST00000552282 SUPT5HO00267 1087 aaKnown RBP29.08■■■□□ 2.25
CALCOCO1-220ENST00000552282 WRNQ14191 1432 aaPredicted RBP eCLIP29.07■■■□□ 2.24
CALCOCO1-220ENST00000552282 ADAMTS12P58397 1594 aa29■■■□□ 2.23
CALCOCO1-220ENST00000552282 GRIN2AQ12879 1464 aa28.97■■■□□ 2.23
CALCOCO1-220ENST00000552282 NUP160Q12769 1436 aa28.92■■■□□ 2.22
CALCOCO1-220ENST00000552282 ERICH3Q5RHP9 1530 aa28.91■■■□□ 2.22
CALCOCO1-220ENST00000552282 CEP170Q5SW79 1584 aa28.87■■■□□ 2.21
CALCOCO1-220ENST00000552282 FHAD1B1AJZ9 1412 aa28.86■■■□□ 2.21
CALCOCO1-220ENST00000552282 SHROOM2Q13796 1616 aa28.84■■■□□ 2.21
CALCOCO1-220ENST00000552282 TRHP20396 242 aaPredicted RBP28.77■■■□□ 2.2
CALCOCO1-220ENST00000552282 ERCC6L2Q5T890 1561 aa28.75■■■□□ 2.19
CALCOCO1-220ENST00000552282 RUSC2Q8N2Y8 1516 aa28.6■■■□□ 2.17
CALCOCO1-220ENST00000552282 CUL7Q14999 1698 aa28.5■■■□□ 2.15
CALCOCO1-220ENST00000552282 PRG4Q92954 1404 aaPredicted RBP28.5■■■□□ 2.15
CALCOCO1-220ENST00000552282 KIF27Q86VH2 1401 aa28.45■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms