RNA–Protein interactions for RNA: ENST00000552280.5

SDS-205, Transcript of serine dehydratase, humanhuman

TSL 3

Gene SDS, Length 412 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDS-205ENST00000552280 NISCHQ9Y2I1 1504 aa48.31■■■■■ 5.32
SDS-205ENST00000552280 ABCC9O60706 1549 aa43.55■■■■■ 4.56
SDS-205ENST00000552280 CCDC180Q9P1Z9 1646 aa43.37■■■■■ 4.53
SDS-205ENST00000552280 RB1CC1Q8TDY2 1594 aa41.32■■■■■ 4.2
SDS-205ENST00000552280 DNAJC5BQ9UF47 199 aa41.09■■■■■ 4.17
SDS-205ENST00000552280 NACADO15069 1562 aa41■■■■■ 4.15
SDS-205ENST00000552280 DCAF8L2P0C7V8 631 aa40.82■■■■■ 4.13
SDS-205ENST00000552280 UNC13AQ9UPW8 1703 aa40.58■■■■■ 4.09
SDS-205ENST00000552280 PABPN1Q86U42 306 aaKnown RBP eCLIP40.55■■■■■ 4.08
SDS-205ENST00000552280 MYO15BQ96JP2 1530 aa40.37■■■■■ 4.05
SDS-205ENST00000552280 BICRAQ9NZM4 1560 aa40.26■■■■■ 4.04
SDS-205ENST00000552280 ZCCHC6Q5VYS8 1495 aaKnown RBP39.99■■■■□ 3.99
SDS-205ENST00000552280 DCAF1Q9Y4B6 1507 aa39.83■■■■□ 3.97
SDS-205ENST00000552280 SCRIBQ14160 1630 aa39.56■■■■□ 3.92
SDS-205ENST00000552280 SHROOM4Q9ULL8 1493 aa39.47■■■■□ 3.91
SDS-205ENST00000552280 CC2D2AQ9P2K1 1620 aa39.35■■■■□ 3.89
SDS-205ENST00000552280 EIF4G1Q04637 1599 aaKnown RBP39.2■■■■□ 3.87
SDS-205ENST00000552280 CECR2Q9BXF3 1484 aa39.19■■■■□ 3.86
SDS-205ENST00000552280 NCAPD3P42695 1498 aa37.88■■■■□ 3.65
SDS-205ENST00000552280 ATAD2BQ9ULI0 1458 aa37.77■■■■□ 3.64
SDS-205ENST00000552280 SMARCA4P51532 1647 aa37.72■■■■□ 3.63
SDS-205ENST00000552280 DNAJC5Q9H3Z4 198 aa37.69■■■■□ 3.62
SDS-205ENST00000552280 SMARCA2P51531 1590 aa37.59■■■■□ 3.61
SDS-205ENST00000552280 HMGXB3Q12766 1538 aa37.56■■■■□ 3.6
SDS-205ENST00000552280 ERCC6Q03468 1493 aa37.5■■■■□ 3.59
SDS-205ENST00000552280 CUX2O14529 1486 aa37.48■■■■□ 3.59
SDS-205ENST00000552280 BAZ1AQ9NRL2 1556 aaPredicted RBP37.45■■■■□ 3.59
SDS-205ENST00000552280 NESP48681 1621 aa37.43■■■■□ 3.58
SDS-205ENST00000552280 BAZ1BQ9UIG0 1483 aaKnown RBP37.35■■■■□ 3.57
SDS-205ENST00000552280 PEG3Q9GZU2 1588 aa37.33■■■■□ 3.57
SDS-205ENST00000552280 MROH2BQ7Z745 1585 aa37.28■■■■□ 3.56
SDS-205ENST00000552280 THOC2Q8NI27 1593 aaKnown RBP37.03■■■■□ 3.52
SDS-205ENST00000552280 LAMC3Q9Y6N6 1575 aa37.03■■■■□ 3.52
SDS-205ENST00000552280 KIF21AQ7Z4S6 1674 aa36.94■■■■□ 3.5
SDS-205ENST00000552280 WIZO95785 1651 aa36.85■■■■□ 3.49
SDS-205ENST00000552280 PDS5BQ9NTI5 1447 aa36.77■■■■□ 3.48
SDS-205ENST00000552280 CADPSQ9ULU8 1353 aa36.71■■■■□ 3.47
SDS-205ENST00000552280 MRC2Q9UBG0 1479 aa36.51■■■■□ 3.44
SDS-205ENST00000552280 WDR62O43379 1518 aa36.44■■■■□ 3.42
SDS-205ENST00000552280 RSF1Q96T23 1441 aaPredicted RBP36.42■■■■□ 3.42
SDS-205ENST00000552280 CEP164Q9UPV0 1460 aa36.32■■■■□ 3.41
SDS-205ENST00000552280 FANCD2Q9BXW9 1451 aa36.31■■■■□ 3.4
SDS-205ENST00000552280 CFTRP13569 1480 aa36.29■■■■□ 3.4
SDS-205ENST00000552280 TOP2AP11388 1531 aaKnown RBP36.27■■■■□ 3.4
SDS-205ENST00000552280 URB2Q14146 1524 aaKnown RBP36.08■■■■□ 3.37
SDS-205ENST00000552280 TRIM41Q8WV44 630 aa35.98■■■■□ 3.35
SDS-205ENST00000552280 PRDM2Q13029 1718 aa35.96■■■■□ 3.35
SDS-205ENST00000552280 CCDC88BA6NC98 1476 aa35.92■■■■□ 3.34
SDS-205ENST00000552280 OSCARQ8IYS5 282 aa35.78■■■■□ 3.32
SDS-205ENST00000552280 ZNF608Q9ULD9 1512 aaPredicted RBP35.67■■■■□ 3.3
SDS-205ENST00000552280 TOPBP1Q92547 1522 aa35.63■■■■□ 3.29
SDS-205ENST00000552280 IFT140Q96RY7 1462 aa35.6■■■■□ 3.29
SDS-205ENST00000552280 DNMBPQ6XZF7 1577 aa35.47■■■■□ 3.27
SDS-205ENST00000552280 ABCC8Q09428 1581 aa35.45■■■■□ 3.27
SDS-205ENST00000552280 EIF4G3O43432 1585 aaKnown RBP35.42■■■■□ 3.26
SDS-205ENST00000552280 RIMBP3CA6NJZ7 1639 aa35.41■■■■□ 3.26
SDS-205ENST00000552280 RIMBP3BA6NNM3 1639 aa35.41■■■■□ 3.26
SDS-205ENST00000552280 RIMBP3Q9UFD9 1639 aa35.41■■■■□ 3.26
SDS-205ENST00000552280 TARBP1Q13395 1621 aaKnown RBP35.37■■■■□ 3.25
SDS-205ENST00000552280 AQRO60306 1485 aaKnown RBP eCLIP35.31■■■■□ 3.24
SDS-205ENST00000552280 POLA1P09884 1462 aaPredicted RBP35.25■■■■□ 3.23
SDS-205ENST00000552280 CHD1O14646 1710 aa35.24■■■■□ 3.23
SDS-205ENST00000552280 ARHGEF11O15085 1522 aa35.24■■■■□ 3.23
SDS-205ENST00000552280 RAD54L2Q9Y4B4 1467 aa35.18■■■■□ 3.22
SDS-205ENST00000552280 SOGA1O94964 1423 aa35.08■■■■□ 3.21
SDS-205ENST00000552280 TDRD9Q8NDG6 1382 aaKnown RBP35.06■■■■□ 3.2
SDS-205ENST00000552280 FBLN2P98095 1184 aa35.04■■■■□ 3.2
SDS-205ENST00000552280 CUX1P39880 1505 aa35.02■■■■□ 3.2
SDS-205ENST00000552280 FGD5Q6ZNL6 1462 aa35.02■■■■□ 3.2
SDS-205ENST00000552280 CYB5RLQ6IPT4 315 aa35■■■■□ 3.19
SDS-205ENST00000552280 ARAP1Q96P48 1450 aa34.91■■■■□ 3.18
SDS-205ENST00000552280 SNAPC4Q5SXM2 1469 aa34.9■■■■□ 3.18
SDS-205ENST00000552280 WDR97A6NE52 1622 aa34.86■■■■□ 3.17
SDS-205ENST00000552280 CLASP1Q7Z460 1538 aa34.78■■■■□ 3.16
SDS-205ENST00000552280 GRIN2BQ13224 1484 aa34.76■■■■□ 3.15
SDS-205ENST00000552280 MAGI1Q96QZ7 1491 aaPredicted RBP34.75■■■■□ 3.15
SDS-205ENST00000552280 CHMP7Q8WUX9 453 aaPredicted RBP34.73■■■■□ 3.15
SDS-205ENST00000552280 SUPT5HO00267 1087 aaKnown RBP34.71■■■■□ 3.15
SDS-205ENST00000552280 PBRM1Q86U86 1689 aa34.7■■■■□ 3.15
SDS-205ENST00000552280 SYNJ1O43426 1573 aa34.67■■■■□ 3.14
SDS-205ENST00000552280 SYNJ2O15056 1496 aa34.65■■■■□ 3.14
SDS-205ENST00000552280 GAPVD1Q14C86 1478 aa34.65■■■■□ 3.14
SDS-205ENST00000552280 TRHP20396 242 aaPredicted RBP34.6■■■■□ 3.13
SDS-205ENST00000552280 ABCA5Q8WWZ7 1642 aa34.59■■■■□ 3.13
SDS-205ENST00000552280 ABCA10Q8WWZ4 1543 aa34.59■■■■□ 3.13
SDS-205ENST00000552280 BIVM-ERCC5R4GMW8 1640 aa34.41■■■■□ 3.1
SDS-205ENST00000552280 WRNQ14191 1432 aaPredicted RBP eCLIP34.38■■■■□ 3.09
SDS-205ENST00000552280 TOP2BQ02880 1626 aa34.37■■■■□ 3.09
SDS-205ENST00000552280 GRIN2AQ12879 1464 aa34.33■■■■□ 3.09
SDS-205ENST00000552280 ERCC6L2Q5T890 1561 aa34.32■■■■□ 3.09
SDS-205ENST00000552280 ADAMTS12P58397 1594 aa34.32■■■■□ 3.08
SDS-205ENST00000552280 CEP170Q5SW79 1584 aa34.28■■■■□ 3.08
SDS-205ENST00000552280 NUP160Q12769 1436 aa34.23■■■■□ 3.07
SDS-205ENST00000552280 FHAD1B1AJZ9 1412 aa34.17■■■■□ 3.06
SDS-205ENST00000552280 SHROOM2Q13796 1616 aa34.14■■■■□ 3.06
SDS-205ENST00000552280 ERICH3Q5RHP9 1530 aa34.14■■■■□ 3.06
SDS-205ENST00000552280 PRG4Q92954 1404 aaPredicted RBP33.91■■■■□ 3.02
SDS-205ENST00000552280 JPH4Q96JJ6 628 aa33.89■■■■□ 3.02
SDS-205ENST00000552280 RUSC2Q8N2Y8 1516 aa33.84■■■■□ 3.01
SDS-205ENST00000552280 KIF13AQ9H1H9 1805 aa33.8■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms