RNA–Protein interactions for RNA: ENST00000552279.1

MARCH9-203, Transcript of membrane associated ring-CH-type finger 9, humanhuman

TSL 2

Gene MARCH9, Length 830 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARCH9-203ENST00000552279 NISCHQ9Y2I1 1504 aa52.56■■■■■ 6
MARCH9-203ENST00000552279 CCDC180Q9P1Z9 1646 aa46.87■■■■■ 5.09
MARCH9-203ENST00000552279 ABCC9O60706 1549 aa46.44■■■■■ 5.03
MARCH9-203ENST00000552279 RB1CC1Q8TDY2 1594 aa44.45■■■■■ 4.71
MARCH9-203ENST00000552279 DCAF8L2P0C7V8 631 aa44.35■■■■■ 4.69
MARCH9-203ENST00000552279 NACADO15069 1562 aa44.29■■■■■ 4.68
MARCH9-203ENST00000552279 MYO15BQ96JP2 1530 aa43.86■■■■■ 4.61
MARCH9-203ENST00000552279 ZCCHC6Q5VYS8 1495 aaKnown RBP43.6■■■■■ 4.57
MARCH9-203ENST00000552279 DCAF1Q9Y4B6 1507 aa43.46■■■■■ 4.55
MARCH9-203ENST00000552279 PABPN1Q86U42 306 aaKnown RBP eCLIP43.41■■■■■ 4.54
MARCH9-203ENST00000552279 UNC13AQ9UPW8 1703 aa43.27■■■■■ 4.52
MARCH9-203ENST00000552279 DNAJC5BQ9UF47 199 aa43.17■■■■■ 4.5
MARCH9-203ENST00000552279 BICRAQ9NZM4 1560 aa43.03■■■■■ 4.48
MARCH9-203ENST00000552279 SCRIBQ14160 1630 aa42.71■■■■■ 4.43
MARCH9-203ENST00000552279 SHROOM4Q9ULL8 1493 aa42.63■■■■■ 4.42
MARCH9-203ENST00000552279 EIF4G1Q04637 1599 aaKnown RBP41.99■■■■■ 4.31
MARCH9-203ENST00000552279 CC2D2AQ9P2K1 1620 aa41.95■■■■■ 4.31
MARCH9-203ENST00000552279 CECR2Q9BXF3 1484 aa41.82■■■■■ 4.29
MARCH9-203ENST00000552279 NCAPD3P42695 1498 aa40.91■■■■■ 4.14
MARCH9-203ENST00000552279 SMARCA4P51532 1647 aa40.82■■■■■ 4.13
MARCH9-203ENST00000552279 ATAD2BQ9ULI0 1458 aa40.82■■■■■ 4.12
MARCH9-203ENST00000552279 BAZ1AQ9NRL2 1556 aaPredicted RBP40.77■■■■■ 4.12
MARCH9-203ENST00000552279 SMARCA2P51531 1590 aa40.74■■■■■ 4.11
MARCH9-203ENST00000552279 HMGXB3Q12766 1538 aa40.57■■■■■ 4.08
MARCH9-203ENST00000552279 BAZ1BQ9UIG0 1483 aaKnown RBP40.45■■■■■ 4.07
MARCH9-203ENST00000552279 MROH2BQ7Z745 1585 aa40.45■■■■■ 4.07
MARCH9-203ENST00000552279 PEG3Q9GZU2 1588 aa40.45■■■■■ 4.07
MARCH9-203ENST00000552279 ERCC6Q03468 1493 aa40.13■■■■■ 4.02
MARCH9-203ENST00000552279 NESP48681 1621 aa40■■■■□ 3.99
MARCH9-203ENST00000552279 WIZO95785 1651 aa39.96■■■■□ 3.99
MARCH9-203ENST00000552279 RSF1Q96T23 1441 aaPredicted RBP39.87■■■■□ 3.97
MARCH9-203ENST00000552279 CUX2O14529 1486 aa39.87■■■■□ 3.97
MARCH9-203ENST00000552279 LAMC3Q9Y6N6 1575 aa39.86■■■■□ 3.97
MARCH9-203ENST00000552279 CADPSQ9ULU8 1353 aa39.72■■■■□ 3.95
MARCH9-203ENST00000552279 PDS5BQ9NTI5 1447 aa39.72■■■■□ 3.95
MARCH9-203ENST00000552279 TOP2AP11388 1531 aaKnown RBP39.53■■■■□ 3.92
MARCH9-203ENST00000552279 KIF21AQ7Z4S6 1674 aa39.43■■■■□ 3.9
MARCH9-203ENST00000552279 THOC2Q8NI27 1593 aaKnown RBP39.42■■■■□ 3.9
MARCH9-203ENST00000552279 DNAJC5Q9H3Z4 198 aa39.39■■■■□ 3.9
MARCH9-203ENST00000552279 CFTRP13569 1480 aa39.32■■■■□ 3.89
MARCH9-203ENST00000552279 MRC2Q9UBG0 1479 aa39.24■■■■□ 3.87
MARCH9-203ENST00000552279 FANCD2Q9BXW9 1451 aa39.21■■■■□ 3.87
MARCH9-203ENST00000552279 CEP164Q9UPV0 1460 aa39.2■■■■□ 3.87
MARCH9-203ENST00000552279 CCDC88BA6NC98 1476 aa39.13■■■■□ 3.85
MARCH9-203ENST00000552279 WDR62O43379 1518 aa39.08■■■■□ 3.85
MARCH9-203ENST00000552279 PRDM2Q13029 1718 aa38.81■■■■□ 3.8
MARCH9-203ENST00000552279 URB2Q14146 1524 aaKnown RBP38.79■■■■□ 3.8
MARCH9-203ENST00000552279 SUPT5HO00267 1087 aaKnown RBP38.59■■■■□ 3.77
MARCH9-203ENST00000552279 ABCC8Q09428 1581 aa38.58■■■■□ 3.77
MARCH9-203ENST00000552279 TOPBP1Q92547 1522 aa38.49■■■■□ 3.75
MARCH9-203ENST00000552279 IFT140Q96RY7 1462 aa38.43■■■■□ 3.74
MARCH9-203ENST00000552279 DNMBPQ6XZF7 1577 aa38.38■■■■□ 3.73
MARCH9-203ENST00000552279 OSCARQ8IYS5 282 aa38.3■■■■□ 3.72
MARCH9-203ENST00000552279 ZNF608Q9ULD9 1512 aaPredicted RBP38.23■■■■□ 3.71
MARCH9-203ENST00000552279 POLA1P09884 1462 aaPredicted RBP38.13■■■■□ 3.69
MARCH9-203ENST00000552279 SOGA1O94964 1423 aa38.07■■■■□ 3.69
MARCH9-203ENST00000552279 TARBP1Q13395 1621 aaKnown RBP38.05■■■■□ 3.68
MARCH9-203ENST00000552279 AQRO60306 1485 aaKnown RBP eCLIP38.02■■■■□ 3.683e-7■■□□□ 12.9
MARCH9-203ENST00000552279 EIF4G3O43432 1585 aaKnown RBP37.99■■■■□ 3.67
MARCH9-203ENST00000552279 RAD54L2Q9Y4B4 1467 aa37.98■■■■□ 3.67
MARCH9-203ENST00000552279 CUX1P39880 1505 aa37.97■■■■□ 3.67
MARCH9-203ENST00000552279 FGD5Q6ZNL6 1462 aa37.96■■■■□ 3.67
MARCH9-203ENST00000552279 TDRD9Q8NDG6 1382 aaKnown RBP37.9■■■■□ 3.66
MARCH9-203ENST00000552279 TRIM41Q8WV44 630 aa37.84■■■■□ 3.65
MARCH9-203ENST00000552279 FBLN2P98095 1184 aa37.8■■■■□ 3.64
MARCH9-203ENST00000552279 WDR97A6NE52 1622 aa37.78■■■■□ 3.64
MARCH9-203ENST00000552279 GRIN2BQ13224 1484 aa37.64■■■■□ 3.62
MARCH9-203ENST00000552279 CHMP7Q8WUX9 453 aaPredicted RBP37.63■■■■□ 3.61
MARCH9-203ENST00000552279 WRNQ14191 1432 aaPredicted RBP eCLIP37.62■■■■□ 3.61
MARCH9-203ENST00000552279 SNAPC4Q5SXM2 1469 aa37.6■■■■□ 3.61
MARCH9-203ENST00000552279 CHD1O14646 1710 aa37.59■■■■□ 3.61
MARCH9-203ENST00000552279 ABCA10Q8WWZ4 1543 aa37.59■■■■□ 3.61
MARCH9-203ENST00000552279 MAGI1Q96QZ7 1491 aaPredicted RBP37.58■■■■□ 3.61
MARCH9-203ENST00000552279 GAPVD1Q14C86 1478 aa37.57■■■■□ 3.6
MARCH9-203ENST00000552279 TOP2BQ02880 1626 aa37.51■■■■□ 3.6
MARCH9-203ENST00000552279 RIMBP3CA6NJZ7 1639 aa37.49■■■■□ 3.59
MARCH9-203ENST00000552279 RIMBP3BA6NNM3 1639 aa37.49■■■■□ 3.59
MARCH9-203ENST00000552279 RIMBP3Q9UFD9 1639 aa37.49■■■■□ 3.59
MARCH9-203ENST00000552279 BIVM-ERCC5R4GMW8 1640 aa37.47■■■■□ 3.59
MARCH9-203ENST00000552279 ARHGEF11O15085 1522 aa37.46■■■■□ 3.59
MARCH9-203ENST00000552279 SYNJ2O15056 1496 aa37.44■■■■□ 3.58
MARCH9-203ENST00000552279 SYNJ1O43426 1573 aa37.43■■■■□ 3.58
MARCH9-203ENST00000552279 ABCA5Q8WWZ7 1642 aa37.38■■■■□ 3.57
MARCH9-203ENST00000552279 PBRM1Q86U86 1689 aa37.37■■■■□ 3.57
MARCH9-203ENST00000552279 CYB5RLQ6IPT4 315 aa37.33■■■■□ 3.57
MARCH9-203ENST00000552279 CLASP1Q7Z460 1538 aa37.22■■■■□ 3.55
MARCH9-203ENST00000552279 FHAD1B1AJZ9 1412 aa37.14■■■■□ 3.54
MARCH9-203ENST00000552279 ERICH3Q5RHP9 1530 aa37.13■■■■□ 3.53
MARCH9-203ENST00000552279 GRIN2AQ12879 1464 aa37.11■■■■□ 3.53
MARCH9-203ENST00000552279 ARAP1Q96P48 1450 aa37.11■■■■□ 3.53
MARCH9-203ENST00000552279 ADAMTS12P58397 1594 aa37.06■■■■□ 3.52
MARCH9-203ENST00000552279 NUP160Q12769 1436 aa36.97■■■■□ 3.51
MARCH9-203ENST00000552279 KIF27Q86VH2 1401 aa36.93■■■■□ 3.5
MARCH9-203ENST00000552279 CEP170Q5SW79 1584 aa36.87■■■■□ 3.49
MARCH9-203ENST00000552279 IGF1RP08069 1367 aa36.85■■■■□ 3.49
MARCH9-203ENST00000552279 TRHP20396 242 aaPredicted RBP36.78■■■■□ 3.48
MARCH9-203ENST00000552279 JPH4Q96JJ6 628 aa36.76■■■■□ 3.48
MARCH9-203ENST00000552279 SHROOM2Q13796 1616 aa36.67■■■■□ 3.46
MARCH9-203ENST00000552279 CUL7Q14999 1698 aa36.64■■■■□ 3.46
MARCH9-203ENST00000552279 ERCC6L2Q5T890 1561 aa36.64■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms