RNA–Protein interactions for RNA: ENST00000552239.1

TMCC3-204, Transcript of transmembrane and coiled-coil domain family 3, humanhuman

TSL 4

Gene TMCC3, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3-204ENST00000552239 NISCHQ9Y2I1 1504 aa27.16■■□□□ 1.94
TMCC3-204ENST00000552239 CCDC180Q9P1Z9 1646 aa24.17■■□□□ 1.46
TMCC3-204ENST00000552239 ABCC9O60706 1549 aa23.99■■□□□ 1.43
TMCC3-204ENST00000552239 DCAF8L2P0C7V8 631 aa22.93■■□□□ 1.26
TMCC3-204ENST00000552239 RB1CC1Q8TDY2 1594 aa22.89■■□□□ 1.25
TMCC3-204ENST00000552239 NACADO15069 1562 aa22.79■■□□□ 1.24
TMCC3-204ENST00000552239 ZCCHC6Q5VYS8 1495 aaKnown RBP22.56■■□□□ 1.2
TMCC3-204ENST00000552239 MYO15BQ96JP2 1530 aa22.53■■□□□ 1.2
TMCC3-204ENST00000552239 UNC13AQ9UPW8 1703 aa22.43■■□□□ 1.18
TMCC3-204ENST00000552239 PABPN1Q86U42 306 aaKnown RBP eCLIP22.43■■□□□ 1.18
TMCC3-204ENST00000552239 DCAF1Q9Y4B6 1507 aa22.38■■□□□ 1.17
TMCC3-204ENST00000552239 DNAJC5BQ9UF47 199 aa22.26■■□□□ 1.15
TMCC3-204ENST00000552239 BICRAQ9NZM4 1560 aa22.25■■□□□ 1.15
TMCC3-204ENST00000552239 SCRIBQ14160 1630 aa22.16■■□□□ 1.14
TMCC3-204ENST00000552239 SHROOM4Q9ULL8 1493 aa21.84■■□□□ 1.09
TMCC3-204ENST00000552239 EIF4G1Q04637 1599 aaKnown RBP21.66■■□□□ 1.06
TMCC3-204ENST00000552239 CC2D2AQ9P2K1 1620 aa21.65■■□□□ 1.06
TMCC3-204ENST00000552239 CECR2Q9BXF3 1484 aa21.53■■□□□ 1.04
TMCC3-204ENST00000552239 SMARCA4P51532 1647 aa21.12■□□□□ 0.97
TMCC3-204ENST00000552239 ATAD2BQ9ULI0 1458 aa21.06■□□□□ 0.96
TMCC3-204ENST00000552239 NCAPD3P42695 1498 aa21.05■□□□□ 0.96
TMCC3-204ENST00000552239 BAZ1AQ9NRL2 1556 aaPredicted RBP21.03■□□□□ 0.96
TMCC3-204ENST00000552239 SMARCA2P51531 1590 aa20.98■□□□□ 0.95
TMCC3-204ENST00000552239 MROH2BQ7Z745 1585 aa20.97■□□□□ 0.95
TMCC3-204ENST00000552239 HMGXB3Q12766 1538 aa20.9■□□□□ 0.94
TMCC3-204ENST00000552239 BAZ1BQ9UIG0 1483 aaKnown RBP20.88■□□□□ 0.93
TMCC3-204ENST00000552239 PEG3Q9GZU2 1588 aa20.86■□□□□ 0.93
TMCC3-204ENST00000552239 WIZO95785 1651 aa20.76■□□□□ 0.91
TMCC3-204ENST00000552239 NESP48681 1621 aa20.71■□□□□ 0.91
TMCC3-204ENST00000552239 ERCC6Q03468 1493 aa20.65■□□□□ 0.9
TMCC3-204ENST00000552239 RSF1Q96T23 1441 aaPredicted RBP20.64■□□□□ 0.89
TMCC3-204ENST00000552239 LAMC3Q9Y6N6 1575 aa20.52■□□□□ 0.88
TMCC3-204ENST00000552239 CADPSQ9ULU8 1353 aa20.46■□□□□ 0.87
TMCC3-204ENST00000552239 CUX2O14529 1486 aa20.44■□□□□ 0.86
TMCC3-204ENST00000552239 TOP2AP11388 1531 aaKnown RBP20.44■□□□□ 0.86
TMCC3-204ENST00000552239 KIF21AQ7Z4S6 1674 aa20.43■□□□□ 0.86
TMCC3-204ENST00000552239 PDS5BQ9NTI5 1447 aa20.4■□□□□ 0.86
TMCC3-204ENST00000552239 THOC2Q8NI27 1593 aaKnown RBP20.37■□□□□ 0.85
TMCC3-204ENST00000552239 CFTRP13569 1480 aa20.27■□□□□ 0.84
TMCC3-204ENST00000552239 CCDC88BA6NC98 1476 aa20.26■□□□□ 0.83
TMCC3-204ENST00000552239 FANCD2Q9BXW9 1451 aa20.23■□□□□ 0.83
TMCC3-204ENST00000552239 MRC2Q9UBG0 1479 aa20.22■□□□□ 0.83
TMCC3-204ENST00000552239 CEP164Q9UPV0 1460 aa20.2■□□□□ 0.82
TMCC3-204ENST00000552239 WDR62O43379 1518 aa20.14■□□□□ 0.81
TMCC3-204ENST00000552239 DNAJC5Q9H3Z4 198 aa20.14■□□□□ 0.81
TMCC3-204ENST00000552239 PRDM2Q13029 1718 aa20.09■□□□□ 0.81
TMCC3-204ENST00000552239 SUPT5HO00267 1087 aaKnown RBP20.07■□□□□ 0.8
TMCC3-204ENST00000552239 URB2Q14146 1524 aaKnown RBP20.06■□□□□ 0.8
TMCC3-204ENST00000552239 TOPBP1Q92547 1522 aa19.88■□□□□ 0.77
TMCC3-204ENST00000552239 DNMBPQ6XZF7 1577 aa19.82■□□□□ 0.76
TMCC3-204ENST00000552239 ABCC8Q09428 1581 aa19.8■□□□□ 0.76
TMCC3-204ENST00000552239 ZNF608Q9ULD9 1512 aaPredicted RBP19.78■□□□□ 0.76
TMCC3-204ENST00000552239 IFT140Q96RY7 1462 aa19.78■□□□□ 0.76
TMCC3-204ENST00000552239 POLA1P09884 1462 aaPredicted RBP19.7■□□□□ 0.74
TMCC3-204ENST00000552239 TARBP1Q13395 1621 aaKnown RBP19.68■□□□□ 0.74
TMCC3-204ENST00000552239 RAD54L2Q9Y4B4 1467 aa19.67■□□□□ 0.74
TMCC3-204ENST00000552239 CUX1P39880 1505 aa19.67■□□□□ 0.74
TMCC3-204ENST00000552239 AQRO60306 1485 aaKnown RBP eCLIP19.65■□□□□ 0.74
TMCC3-204ENST00000552239 EIF4G3O43432 1585 aaKnown RBP19.65■□□□□ 0.74
TMCC3-204ENST00000552239 FGD5Q6ZNL6 1462 aa19.64■□□□□ 0.73
TMCC3-204ENST00000552239 SOGA1O94964 1423 aa19.63■□□□□ 0.73
TMCC3-204ENST00000552239 OSCARQ8IYS5 282 aa19.63■□□□□ 0.73
TMCC3-204ENST00000552239 TDRD9Q8NDG6 1382 aaKnown RBP19.58■□□□□ 0.73
TMCC3-204ENST00000552239 FBLN2P98095 1184 aa19.49■□□□□ 0.71
TMCC3-204ENST00000552239 TRIM41Q8WV44 630 aa19.47■□□□□ 0.71
TMCC3-204ENST00000552239 CHD1O14646 1710 aa19.47■□□□□ 0.71
TMCC3-204ENST00000552239 WDR97A6NE52 1622 aa19.46■□□□□ 0.71
TMCC3-204ENST00000552239 WRNQ14191 1432 aaPredicted RBP eCLIP19.45■□□□□ 0.7
TMCC3-204ENST00000552239 SYNJ1O43426 1573 aa19.44■□□□□ 0.7
TMCC3-204ENST00000552239 SNAPC4Q5SXM2 1469 aa19.42■□□□□ 0.7
TMCC3-204ENST00000552239 TOP2BQ02880 1626 aa19.41■□□□□ 0.7
TMCC3-204ENST00000552239 BIVM-ERCC5R4GMW8 1640 aa19.41■□□□□ 0.7
TMCC3-204ENST00000552239 ABCA10Q8WWZ4 1543 aa19.4■□□□□ 0.7
TMCC3-204ENST00000552239 GRIN2BQ13224 1484 aa19.39■□□□□ 0.69
TMCC3-204ENST00000552239 GAPVD1Q14C86 1478 aa19.39■□□□□ 0.69
TMCC3-204ENST00000552239 PBRM1Q86U86 1689 aa19.36■□□□□ 0.69
TMCC3-204ENST00000552239 CHMP7Q8WUX9 453 aaPredicted RBP19.36■□□□□ 0.69
TMCC3-204ENST00000552239 RIMBP3CA6NJZ7 1639 aa19.34■□□□□ 0.69
TMCC3-204ENST00000552239 RIMBP3BA6NNM3 1639 aa19.34■□□□□ 0.69
TMCC3-204ENST00000552239 ABCA5Q8WWZ7 1642 aa19.34■□□□□ 0.69
TMCC3-204ENST00000552239 RIMBP3Q9UFD9 1639 aa19.34■□□□□ 0.69
TMCC3-204ENST00000552239 MAGI1Q96QZ7 1491 aaPredicted RBP19.34■□□□□ 0.69
TMCC3-204ENST00000552239 ARHGEF11O15085 1522 aa19.3■□□□□ 0.68
TMCC3-204ENST00000552239 SYNJ2O15056 1496 aa19.28■□□□□ 0.68
TMCC3-204ENST00000552239 CLASP1Q7Z460 1538 aa19.21■□□□□ 0.67
TMCC3-204ENST00000552239 CYB5RLQ6IPT4 315 aa19.2■□□□□ 0.66
TMCC3-204ENST00000552239 ADAMTS12P58397 1594 aa19.18■□□□□ 0.66
TMCC3-204ENST00000552239 GRIN2AQ12879 1464 aa19.15■□□□□ 0.66
TMCC3-204ENST00000552239 ERICH3Q5RHP9 1530 aa19.15■□□□□ 0.66
TMCC3-204ENST00000552239 ARAP1Q96P48 1450 aa19.14■□□□□ 0.65
TMCC3-204ENST00000552239 FHAD1B1AJZ9 1412 aa19.13■□□□□ 0.65
TMCC3-204ENST00000552239 CEP170Q5SW79 1584 aa19.09■□□□□ 0.65
TMCC3-204ENST00000552239 NUP160Q12769 1436 aa19.06■□□□□ 0.64
TMCC3-204ENST00000552239 KIF27Q86VH2 1401 aa19.05■□□□□ 0.64
TMCC3-204ENST00000552239 IGF1RP08069 1367 aa19.04■□□□□ 0.64
TMCC3-204ENST00000552239 ERCC6L2Q5T890 1561 aa19.02■□□□□ 0.63
TMCC3-204ENST00000552239 SHROOM2Q13796 1616 aa18.93■□□□□ 0.62
TMCC3-204ENST00000552239 CUL7Q14999 1698 aa18.93■□□□□ 0.62
TMCC3-204ENST00000552239 RUSC2Q8N2Y8 1516 aa18.92■□□□□ 0.62
TMCC3-204ENST00000552239 JPH4Q96JJ6 628 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms