RNA–Protein interactions for RNA: ENST00000552121.5

C12orf29-208, Transcript of chromosome 12 open reading frame 29, humanhuman

TSL 1 (best)

Gene C12orf29, Length 1,578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf29-208ENST00000552121 NISCHQ9Y2I1 1504 aa36.94■■■■□ 3.5
C12orf29-208ENST00000552121 CCDC180Q9P1Z9 1646 aa32.91■■■□□ 2.86
C12orf29-208ENST00000552121 ABCC9O60706 1549 aa32.57■■■□□ 2.8
C12orf29-208ENST00000552121 RB1CC1Q8TDY2 1594 aa31.13■■■□□ 2.57
C12orf29-208ENST00000552121 DCAF8L2P0C7V8 631 aa31.06■■■□□ 2.56
C12orf29-208ENST00000552121 NACADO15069 1562 aa31.01■■■□□ 2.55
C12orf29-208ENST00000552121 ZCCHC6Q5VYS8 1495 aaKnown RBP30.71■■■□□ 2.51
C12orf29-208ENST00000552121 MYO15BQ96JP2 1530 aa30.69■■■□□ 2.5
C12orf29-208ENST00000552121 DCAF1Q9Y4B6 1507 aa30.48■■■□□ 2.47
C12orf29-208ENST00000552121 UNC13AQ9UPW8 1703 aa30.46■■■□□ 2.47
C12orf29-208ENST00000552121 PABPN1Q86U42 306 aaKnown RBP eCLIP30.42■■■□□ 2.46
C12orf29-208ENST00000552121 BICRAQ9NZM4 1560 aa30.24■■■□□ 2.43
C12orf29-208ENST00000552121 DNAJC5BQ9UF47 199 aa30.17■■■□□ 2.42
C12orf29-208ENST00000552121 SCRIBQ14160 1630 aa30.11■■■□□ 2.41
C12orf29-208ENST00000552121 SHROOM4Q9ULL8 1493 aa29.79■■■□□ 2.36
C12orf29-208ENST00000552121 EIF4G1Q04637 1599 aaKnown RBP29.45■■■□□ 2.31
C12orf29-208ENST00000552121 CC2D2AQ9P2K1 1620 aa29.41■■■□□ 2.3
C12orf29-208ENST00000552121 CECR2Q9BXF3 1484 aa29.26■■■□□ 2.27
C12orf29-208ENST00000552121 SMARCA4P51532 1647 aa28.72■■■□□ 2.19
C12orf29-208ENST00000552121 NCAPD3P42695 1498 aa28.63■■■□□ 2.17
C12orf29-208ENST00000552121 ATAD2BQ9ULI0 1458 aa28.63■■■□□ 2.17
C12orf29-208ENST00000552121 BAZ1AQ9NRL2 1556 aaPredicted RBP28.62■■■□□ 2.17
C12orf29-208ENST00000552121 SMARCA2P51531 1590 aa28.55■■■□□ 2.16
C12orf29-208ENST00000552121 MROH2BQ7Z745 1585 aa28.51■■■□□ 2.15
C12orf29-208ENST00000552121 HMGXB3Q12766 1538 aa28.46■■■□□ 2.15
C12orf29-208ENST00000552121 PEG3Q9GZU2 1588 aa28.4■■■□□ 2.14
C12orf29-208ENST00000552121 BAZ1BQ9UIG0 1483 aaKnown RBP28.39■■■□□ 2.14
C12orf29-208ENST00000552121 WIZO95785 1651 aa28.19■■■□□ 2.1
C12orf29-208ENST00000552121 NESP48681 1621 aa28.12■■■□□ 2.09
C12orf29-208ENST00000552121 RSF1Q96T23 1441 aaPredicted RBP28.07■■■□□ 2.08
C12orf29-208ENST00000552121 ERCC6Q03468 1493 aa28.06■■■□□ 2.08
C12orf29-208ENST00000552121 LAMC3Q9Y6N6 1575 aa27.91■■■□□ 2.06
C12orf29-208ENST00000552121 TOP2AP11388 1531 aaKnown RBP27.83■■■□□ 2.05
C12orf29-208ENST00000552121 CUX2O14529 1486 aa27.81■■■□□ 2.04
C12orf29-208ENST00000552121 CADPSQ9ULU8 1353 aa27.8■■■□□ 2.04
C12orf29-208ENST00000552121 KIF21AQ7Z4S6 1674 aa27.74■■■□□ 2.03
C12orf29-208ENST00000552121 PDS5BQ9NTI5 1447 aa27.74■■■□□ 2.03
C12orf29-208ENST00000552121 THOC2Q8NI27 1593 aaKnown RBP27.69■■■□□ 2.02
C12orf29-208ENST00000552121 CFTRP13569 1480 aa27.58■■■□□ 2.01
C12orf29-208ENST00000552121 CCDC88BA6NC98 1476 aa27.53■■■□□ 2
C12orf29-208ENST00000552121 FANCD2Q9BXW9 1451 aa27.5■■□□□ 1.99
C12orf29-208ENST00000552121 MRC2Q9UBG0 1479 aa27.5■■□□□ 1.99
C12orf29-208ENST00000552121 CEP164Q9UPV0 1460 aa27.49■■□□□ 1.99
C12orf29-208ENST00000552121 WDR62O43379 1518 aa27.4■■□□□ 1.98
C12orf29-208ENST00000552121 PRDM2Q13029 1718 aa27.31■■□□□ 1.96
C12orf29-208ENST00000552121 DNAJC5Q9H3Z4 198 aa27.31■■□□□ 1.96
C12orf29-208ENST00000552121 URB2Q14146 1524 aaKnown RBP27.27■■□□□ 1.96
C12orf29-208ENST00000552121 SUPT5HO00267 1087 aaKnown RBP27.22■■□□□ 1.95
C12orf29-208ENST00000552121 TOPBP1Q92547 1522 aa27.03■■□□□ 1.92
C12orf29-208ENST00000552121 DNMBPQ6XZF7 1577 aa26.96■■□□□ 1.91
C12orf29-208ENST00000552121 ABCC8Q09428 1581 aa26.94■■□□□ 1.9
C12orf29-208ENST00000552121 IFT140Q96RY7 1462 aa26.91■■□□□ 1.9
C12orf29-208ENST00000552121 ZNF608Q9ULD9 1512 aaPredicted RBP26.88■■□□□ 1.89
C12orf29-208ENST00000552121 POLA1P09884 1462 aaPredicted RBP26.79■■□□□ 1.88
C12orf29-208ENST00000552121 CUX1P39880 1505 aa26.75■■□□□ 1.87
C12orf29-208ENST00000552121 TARBP1Q13395 1621 aaKnown RBP26.75■■□□□ 1.87
C12orf29-208ENST00000552121 EIF4G3O43432 1585 aaKnown RBP26.72■■□□□ 1.87
C12orf29-208ENST00000552121 RAD54L2Q9Y4B4 1467 aa26.72■■□□□ 1.87
C12orf29-208ENST00000552121 FGD5Q6ZNL6 1462 aa26.7■■□□□ 1.86
C12orf29-208ENST00000552121 AQRO60306 1485 aaKnown RBP eCLIP26.68■■□□□ 1.86
C12orf29-208ENST00000552121 SOGA1O94964 1423 aa26.67■■□□□ 1.86
C12orf29-208ENST00000552121 OSCARQ8IYS5 282 aa26.64■■□□□ 1.86
C12orf29-208ENST00000552121 TDRD9Q8NDG6 1382 aaKnown RBP26.6■■□□□ 1.85
C12orf29-208ENST00000552121 WDR97A6NE52 1622 aa26.46■■□□□ 1.83
C12orf29-208ENST00000552121 WRNQ14191 1432 aaPredicted RBP eCLIP26.46■■□□□ 1.83
C12orf29-208ENST00000552121 CHD1O14646 1710 aa26.44■■□□□ 1.82
C12orf29-208ENST00000552121 SYNJ1O43426 1573 aa26.44■■□□□ 1.82
C12orf29-208ENST00000552121 FBLN2P98095 1184 aa26.42■■□□□ 1.82
C12orf29-208ENST00000552121 SNAPC4Q5SXM2 1469 aa26.42■■□□□ 1.82
C12orf29-208ENST00000552121 TOP2BQ02880 1626 aa26.41■■□□□ 1.82
C12orf29-208ENST00000552121 BIVM-ERCC5R4GMW8 1640 aa26.41■■□□□ 1.82
C12orf29-208ENST00000552121 ABCA10Q8WWZ4 1543 aa26.39■■□□□ 1.81
C12orf29-208ENST00000552121 GRIN2BQ13224 1484 aa26.37■■□□□ 1.81
C12orf29-208ENST00000552121 TRIM41Q8WV44 630 aa26.37■■□□□ 1.81
C12orf29-208ENST00000552121 GAPVD1Q14C86 1478 aa26.35■■□□□ 1.81
C12orf29-208ENST00000552121 ABCA5Q8WWZ7 1642 aa26.32■■□□□ 1.8
C12orf29-208ENST00000552121 MAGI1Q96QZ7 1491 aaPredicted RBP26.32■■□□□ 1.8
C12orf29-208ENST00000552121 PBRM1Q86U86 1689 aa26.31■■□□□ 1.8
C12orf29-208ENST00000552121 RIMBP3CA6NJZ7 1639 aa26.27■■□□□ 1.8
C12orf29-208ENST00000552121 RIMBP3BA6NNM3 1639 aa26.27■■□□□ 1.8
C12orf29-208ENST00000552121 RIMBP3Q9UFD9 1639 aa26.27■■□□□ 1.8
C12orf29-208ENST00000552121 CHMP7Q8WUX9 453 aaPredicted RBP26.27■■□□□ 1.8
C12orf29-208ENST00000552121 SYNJ2O15056 1496 aa26.23■■□□□ 1.79
C12orf29-208ENST00000552121 ARHGEF11O15085 1522 aa26.23■■□□□ 1.79
C12orf29-208ENST00000552121 CLASP1Q7Z460 1538 aa26.13■■□□□ 1.77
C12orf29-208ENST00000552121 ADAMTS12P58397 1594 aa26.1■■□□□ 1.77
C12orf29-208ENST00000552121 ERICH3Q5RHP9 1530 aa26.05■■□□□ 1.76
C12orf29-208ENST00000552121 GRIN2AQ12879 1464 aa26.05■■□□□ 1.76
C12orf29-208ENST00000552121 CYB5RLQ6IPT4 315 aa26.03■■□□□ 1.76
C12orf29-208ENST00000552121 FHAD1B1AJZ9 1412 aa26.02■■□□□ 1.76
C12orf29-208ENST00000552121 ARAP1Q96P48 1450 aa26.02■■□□□ 1.76
C12orf29-208ENST00000552121 CEP170Q5SW79 1584 aa25.95■■□□□ 1.74
C12orf29-208ENST00000552121 NUP160Q12769 1436 aa25.93■■□□□ 1.74
C12orf29-208ENST00000552121 KIF27Q86VH2 1401 aa25.91■■□□□ 1.74
C12orf29-208ENST00000552121 IGF1RP08069 1367 aa25.86■■□□□ 1.73
C12orf29-208ENST00000552121 ERCC6L2Q5T890 1561 aa25.81■■□□□ 1.72
C12orf29-208ENST00000552121 CUL7Q14999 1698 aa25.76■■□□□ 1.71
C12orf29-208ENST00000552121 SHROOM2Q13796 1616 aa25.76■■□□□ 1.71
C12orf29-208ENST00000552121 RUSC2Q8N2Y8 1516 aa25.72■■□□□ 1.71
C12orf29-208ENST00000552121 CARMIL1Q5VZK9 1371 aa25.7■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 135.3 ms