RNA–Protein interactions for RNA: ENST00000552108.6

PRICKLE1-207, Transcript of prickle planar cell polarity protein 1, humanhuman

TSL 5

Gene PRICKLE1, Length 789 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-207ENST00000552108 NISCHQ9Y2I1 1504 aa36.18■■■■□ 3.38
PRICKLE1-207ENST00000552108 CCDC180Q9P1Z9 1646 aa32.53■■■□□ 2.8
PRICKLE1-207ENST00000552108 ABCC9O60706 1549 aa32.36■■■□□ 2.77
PRICKLE1-207ENST00000552108 RB1CC1Q8TDY2 1594 aa30.88■■■□□ 2.53
PRICKLE1-207ENST00000552108 NACADO15069 1562 aa30.69■■■□□ 2.5
PRICKLE1-207ENST00000552108 DCAF8L2P0C7V8 631 aa30.52■■■□□ 2.48
PRICKLE1-207ENST00000552108 MYO15BQ96JP2 1530 aa30.3■■■□□ 2.44
PRICKLE1-207ENST00000552108 DNAJC5BQ9UF47 199 aa30.23■■■□□ 2.43
PRICKLE1-207ENST00000552108 UNC13AQ9UPW8 1703 aa30.22■■■□□ 2.43
PRICKLE1-207ENST00000552108 PABPN1Q86U42 306 aaKnown RBP eCLIP30.07■■■□□ 2.4
PRICKLE1-207ENST00000552108 ZCCHC6Q5VYS8 1495 aaKnown RBP30.03■■■□□ 2.4
PRICKLE1-207ENST00000552108 BICRAQ9NZM4 1560 aa29.98■■■□□ 2.39
PRICKLE1-207ENST00000552108 DCAF1Q9Y4B6 1507 aa29.93■■■□□ 2.38
PRICKLE1-207ENST00000552108 SHROOM4Q9ULL8 1493 aa29.63■■■□□ 2.33
PRICKLE1-207ENST00000552108 SCRIBQ14160 1630 aa29.59■■■□□ 2.33
PRICKLE1-207ENST00000552108 CC2D2AQ9P2K1 1620 aa29.28■■■□□ 2.28
PRICKLE1-207ENST00000552108 EIF4G1Q04637 1599 aaKnown RBP29.24■■■□□ 2.27
PRICKLE1-207ENST00000552108 CECR2Q9BXF3 1484 aa29.16■■■□□ 2.26
PRICKLE1-207ENST00000552108 NCAPD3P42695 1498 aa28.29■■■□□ 2.12
PRICKLE1-207ENST00000552108 SMARCA4P51532 1647 aa28.25■■■□□ 2.11
PRICKLE1-207ENST00000552108 ATAD2BQ9ULI0 1458 aa28.21■■■□□ 2.11
PRICKLE1-207ENST00000552108 SMARCA2P51531 1590 aa28.18■■■□□ 2.1
PRICKLE1-207ENST00000552108 HMGXB3Q12766 1538 aa28.15■■■□□ 2.1
PRICKLE1-207ENST00000552108 BAZ1AQ9NRL2 1556 aaPredicted RBP28.11■■■□□ 2.09
PRICKLE1-207ENST00000552108 PEG3Q9GZU2 1588 aa27.99■■■□□ 2.07
PRICKLE1-207ENST00000552108 BAZ1BQ9UIG0 1483 aaKnown RBP27.96■■■□□ 2.07
PRICKLE1-207ENST00000552108 ERCC6Q03468 1493 aa27.95■■■□□ 2.06
PRICKLE1-207ENST00000552108 CUX2O14529 1486 aa27.91■■■□□ 2.06
PRICKLE1-207ENST00000552108 MROH2BQ7Z745 1585 aa27.88■■■□□ 2.05
PRICKLE1-207ENST00000552108 NESP48681 1621 aa27.82■■■□□ 2.04
PRICKLE1-207ENST00000552108 DNAJC5Q9H3Z4 198 aa27.74■■■□□ 2.03
PRICKLE1-207ENST00000552108 LAMC3Q9Y6N6 1575 aa27.69■■■□□ 2.02
PRICKLE1-207ENST00000552108 THOC2Q8NI27 1593 aaKnown RBP27.6■■■□□ 2.01
PRICKLE1-207ENST00000552108 WIZO95785 1651 aa27.56■■■□□ 2
PRICKLE1-207ENST00000552108 KIF21AQ7Z4S6 1674 aa27.52■■■□□ 2
PRICKLE1-207ENST00000552108 PDS5BQ9NTI5 1447 aa27.48■■□□□ 1.99
PRICKLE1-207ENST00000552108 CADPSQ9ULU8 1353 aa27.42■■□□□ 1.98
PRICKLE1-207ENST00000552108 RSF1Q96T23 1441 aaPredicted RBP27.35■■□□□ 1.97
PRICKLE1-207ENST00000552108 MRC2Q9UBG0 1479 aa27.27■■□□□ 1.96
PRICKLE1-207ENST00000552108 TOP2AP11388 1531 aaKnown RBP27.24■■□□□ 1.95
PRICKLE1-207ENST00000552108 WDR62O43379 1518 aa27.23■■□□□ 1.95
PRICKLE1-207ENST00000552108 CEP164Q9UPV0 1460 aa27.17■■□□□ 1.94
PRICKLE1-207ENST00000552108 CFTRP13569 1480 aa27.15■■□□□ 1.94
PRICKLE1-207ENST00000552108 FANCD2Q9BXW9 1451 aa27.13■■□□□ 1.93
PRICKLE1-207ENST00000552108 PRDM2Q13029 1718 aa26.98■■□□□ 1.91
PRICKLE1-207ENST00000552108 URB2Q14146 1524 aaKnown RBP26.91■■□□□ 1.9
PRICKLE1-207ENST00000552108 CCDC88BA6NC98 1476 aa26.88■■□□□ 1.89
PRICKLE1-207ENST00000552108 TOPBP1Q92547 1522 aa26.64■■□□□ 1.85
PRICKLE1-207ENST00000552108 IFT140Q96RY7 1462 aa26.62■■□□□ 1.85
PRICKLE1-207ENST00000552108 ABCC8Q09428 1581 aa26.58■■□□□ 1.85
PRICKLE1-207ENST00000552108 DNMBPQ6XZF7 1577 aa26.58■■□□□ 1.85
PRICKLE1-207ENST00000552108 OSCARQ8IYS5 282 aa26.56■■□□□ 1.84
PRICKLE1-207ENST00000552108 ZNF608Q9ULD9 1512 aaPredicted RBP26.55■■□□□ 1.84
PRICKLE1-207ENST00000552108 TRIM41Q8WV44 630 aa26.52■■□□□ 1.84
PRICKLE1-207ENST00000552108 EIF4G3O43432 1585 aaKnown RBP26.47■■□□□ 1.83
PRICKLE1-207ENST00000552108 TARBP1Q13395 1621 aaKnown RBP26.42■■□□□ 1.82
PRICKLE1-207ENST00000552108 POLA1P09884 1462 aaPredicted RBP26.36■■□□□ 1.81
PRICKLE1-207ENST00000552108 SUPT5HO00267 1087 aaKnown RBP26.31■■□□□ 1.8
PRICKLE1-207ENST00000552108 RIMBP3CA6NJZ7 1639 aa26.3■■□□□ 1.8
PRICKLE1-207ENST00000552108 RIMBP3BA6NNM3 1639 aa26.3■■□□□ 1.8
PRICKLE1-207ENST00000552108 RIMBP3Q9UFD9 1639 aa26.3■■□□□ 1.8
PRICKLE1-207ENST00000552108 AQRO60306 1485 aaKnown RBP eCLIP26.3■■□□□ 1.8
PRICKLE1-207ENST00000552108 CHD1O14646 1710 aa26.27■■□□□ 1.8
PRICKLE1-207ENST00000552108 RAD54L2Q9Y4B4 1467 aa26.23■■□□□ 1.79
PRICKLE1-207ENST00000552108 SOGA1O94964 1423 aa26.22■■□□□ 1.79
PRICKLE1-207ENST00000552108 ARHGEF11O15085 1522 aa26.21■■□□□ 1.79
PRICKLE1-207ENST00000552108 FGD5Q6ZNL6 1462 aa26.21■■□□□ 1.79
PRICKLE1-207ENST00000552108 CUX1P39880 1505 aa26.2■■□□□ 1.79
PRICKLE1-207ENST00000552108 WDR97A6NE52 1622 aa26.19■■□□□ 1.78
PRICKLE1-207ENST00000552108 TDRD9Q8NDG6 1382 aaKnown RBP26.13■■□□□ 1.77
PRICKLE1-207ENST00000552108 FBLN2P98095 1184 aa26.1■■□□□ 1.77
PRICKLE1-207ENST00000552108 SNAPC4Q5SXM2 1469 aa26.07■■□□□ 1.76
PRICKLE1-207ENST00000552108 MAGI1Q96QZ7 1491 aaPredicted RBP26.03■■□□□ 1.76
PRICKLE1-207ENST00000552108 GRIN2BQ13224 1484 aa26.01■■□□□ 1.75
PRICKLE1-207ENST00000552108 PBRM1Q86U86 1689 aa25.97■■□□□ 1.75
PRICKLE1-207ENST00000552108 CHMP7Q8WUX9 453 aaPredicted RBP25.97■■□□□ 1.75
PRICKLE1-207ENST00000552108 CLASP1Q7Z460 1538 aa25.96■■□□□ 1.75
PRICKLE1-207ENST00000552108 ARAP1Q96P48 1450 aa25.96■■□□□ 1.75
PRICKLE1-207ENST00000552108 SYNJ1O43426 1573 aa25.94■■□□□ 1.74
PRICKLE1-207ENST00000552108 ABCA10Q8WWZ4 1543 aa25.93■■□□□ 1.74
PRICKLE1-207ENST00000552108 ABCA5Q8WWZ7 1642 aa25.92■■□□□ 1.74
PRICKLE1-207ENST00000552108 SYNJ2O15056 1496 aa25.92■■□□□ 1.74
PRICKLE1-207ENST00000552108 GAPVD1Q14C86 1478 aa25.91■■□□□ 1.74
PRICKLE1-207ENST00000552108 CYB5RLQ6IPT4 315 aa25.91■■□□□ 1.74
PRICKLE1-207ENST00000552108 WRNQ14191 1432 aaPredicted RBP eCLIP25.86■■□□□ 1.73
PRICKLE1-207ENST00000552108 BIVM-ERCC5R4GMW8 1640 aa25.84■■□□□ 1.73
PRICKLE1-207ENST00000552108 TOP2BQ02880 1626 aa25.82■■□□□ 1.72
PRICKLE1-207ENST00000552108 ADAMTS12P58397 1594 aa25.73■■□□□ 1.71
PRICKLE1-207ENST00000552108 GRIN2AQ12879 1464 aa25.68■■□□□ 1.7
PRICKLE1-207ENST00000552108 ERICH3Q5RHP9 1530 aa25.61■■□□□ 1.69
PRICKLE1-207ENST00000552108 CEP170Q5SW79 1584 aa25.61■■□□□ 1.69
PRICKLE1-207ENST00000552108 TRHP20396 242 aaPredicted RBP25.6■■□□□ 1.69
PRICKLE1-207ENST00000552108 NUP160Q12769 1436 aa25.6■■□□□ 1.69
PRICKLE1-207ENST00000552108 FHAD1B1AJZ9 1412 aa25.59■■□□□ 1.69
PRICKLE1-207ENST00000552108 ERCC6L2Q5T890 1561 aa25.52■■□□□ 1.68
PRICKLE1-207ENST00000552108 SHROOM2Q13796 1616 aa25.52■■□□□ 1.68
PRICKLE1-207ENST00000552108 RUSC2Q8N2Y8 1516 aa25.36■■□□□ 1.65
PRICKLE1-207ENST00000552108 KIF27Q86VH2 1401 aa25.35■■□□□ 1.65
PRICKLE1-207ENST00000552108 JPH4Q96JJ6 628 aa25.34■■□□□ 1.65
PRICKLE1-207ENST00000552108 IGF1RP08069 1367 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms