RNA–Protein interactions for RNA: ENST00000552089.5

RBFOX1-214, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 1,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-214ENST00000552089 NISCHQ9Y2I1 1504 aa29.74■■■□□ 2.35
RBFOX1-214ENST00000552089 ABCC9O60706 1549 aa28.4■■■□□ 2.14
RBFOX1-214ENST00000552089 DNAJC5BQ9UF47 199 aa27.67■■■□□ 2.02
RBFOX1-214ENST00000552089 CCDC180Q9P1Z9 1646 aa27.18■■□□□ 1.94
RBFOX1-214ENST00000552089 RB1CC1Q8TDY2 1594 aa26.47■■□□□ 1.83
RBFOX1-214ENST00000552089 PABPN1Q86U42 306 aaKnown RBP eCLIP26.25■■□□□ 1.79
RBFOX1-214ENST00000552089 DNAJC5Q9H3Z4 198 aa26.25■■□□□ 1.79
RBFOX1-214ENST00000552089 NACADO15069 1562 aa25.99■■□□□ 1.75
RBFOX1-214ENST00000552089 UNC13AQ9UPW8 1703 aa25.8■■□□□ 1.72
RBFOX1-214ENST00000552089 BICRAQ9NZM4 1560 aa25.75■■□□□ 1.71
RBFOX1-214ENST00000552089 CECR2Q9BXF3 1484 aa25.71■■□□□ 1.71
RBFOX1-214ENST00000552089 DCAF8L2P0C7V8 631 aa25.63■■□□□ 1.69
RBFOX1-214ENST00000552089 CC2D2AQ9P2K1 1620 aa25.56■■□□□ 1.68
RBFOX1-214ENST00000552089 SHROOM4Q9ULL8 1493 aa25.28■■□□□ 1.64
RBFOX1-214ENST00000552089 MYO15BQ96JP2 1530 aa25.22■■□□□ 1.63
RBFOX1-214ENST00000552089 EIF4G1Q04637 1599 aaKnown RBP25.22■■□□□ 1.63
RBFOX1-214ENST00000552089 CUX2O14529 1486 aa24.95■■□□□ 1.58
RBFOX1-214ENST00000552089 SCRIBQ14160 1630 aa24.75■■□□□ 1.55
RBFOX1-214ENST00000552089 TRIM41Q8WV44 630 aa24.68■■□□□ 1.54
RBFOX1-214ENST00000552089 ERCC6Q03468 1493 aa24.62■■□□□ 1.53
RBFOX1-214ENST00000552089 DCAF1Q9Y4B6 1507 aa24.47■■□□□ 1.51
RBFOX1-214ENST00000552089 ZCCHC6Q5VYS8 1495 aaKnown RBP24.42■■□□□ 1.5
RBFOX1-214ENST00000552089 NESP48681 1621 aa24.05■■□□□ 1.44
RBFOX1-214ENST00000552089 THOC2Q8NI27 1593 aaKnown RBP24.04■■□□□ 1.44
RBFOX1-214ENST00000552089 NCAPD3P42695 1498 aa24.01■■□□□ 1.43
RBFOX1-214ENST00000552089 SMARCA2P51531 1590 aa23.84■■□□□ 1.41
RBFOX1-214ENST00000552089 ATAD2BQ9ULI0 1458 aa23.79■■□□□ 1.4
RBFOX1-214ENST00000552089 HMGXB3Q12766 1538 aa23.74■■□□□ 1.39
RBFOX1-214ENST00000552089 KIF21AQ7Z4S6 1674 aa23.66■■□□□ 1.38
RBFOX1-214ENST00000552089 BAZ1AQ9NRL2 1556 aaPredicted RBP23.66■■□□□ 1.38
RBFOX1-214ENST00000552089 LAMC3Q9Y6N6 1575 aa23.66■■□□□ 1.38
RBFOX1-214ENST00000552089 OSCARQ8IYS5 282 aa23.58■■□□□ 1.36
RBFOX1-214ENST00000552089 PDS5BQ9NTI5 1447 aa23.58■■□□□ 1.36
RBFOX1-214ENST00000552089 BAZ1BQ9UIG0 1483 aaKnown RBP23.51■■□□□ 1.35
RBFOX1-214ENST00000552089 AEBP2Q6ZN18 517 aaPredicted RBP23.48■■□□□ 1.35
RBFOX1-214ENST00000552089 MRC2Q9UBG0 1479 aa23.47■■□□□ 1.35
RBFOX1-214ENST00000552089 SMARCA4P51532 1647 aa23.46■■□□□ 1.35
RBFOX1-214ENST00000552089 WDR62O43379 1518 aa23.44■■□□□ 1.34
RBFOX1-214ENST00000552089 RIMBP3CA6NJZ7 1639 aa23.43■■□□□ 1.34
RBFOX1-214ENST00000552089 RIMBP3BA6NNM3 1639 aa23.43■■□□□ 1.34
RBFOX1-214ENST00000552089 RIMBP3Q9UFD9 1639 aa23.43■■□□□ 1.34
RBFOX1-214ENST00000552089 TRHP20396 242 aaPredicted RBP23.28■■□□□ 1.32
RBFOX1-214ENST00000552089 ARHGEF11O15085 1522 aa23.25■■□□□ 1.31
RBFOX1-214ENST00000552089 CADPSQ9ULU8 1353 aa23.23■■□□□ 1.31
RBFOX1-214ENST00000552089 PEG3Q9GZU2 1588 aa23.21■■□□□ 1.31
RBFOX1-214ENST00000552089 CEP164Q9UPV0 1460 aa23.14■■□□□ 1.29
RBFOX1-214ENST00000552089 CYB5RLQ6IPT4 315 aa23.13■■□□□ 1.29
RBFOX1-214ENST00000552089 FANCD2Q9BXW9 1451 aa23■■□□□ 1.27
RBFOX1-214ENST00000552089 ARAP1Q96P48 1450 aa22.96■■□□□ 1.27
RBFOX1-214ENST00000552089 MROH2BQ7Z745 1585 aa22.92■■□□□ 1.26
RBFOX1-214ENST00000552089 URB2Q14146 1524 aaKnown RBP22.89■■□□□ 1.25
RBFOX1-214ENST00000552089 ZNF608Q9ULD9 1512 aaPredicted RBP22.81■■□□□ 1.24
RBFOX1-214ENST00000552089 CFTRP13569 1480 aa22.72■■□□□ 1.23
RBFOX1-214ENST00000552089 IFT140Q96RY7 1462 aa22.72■■□□□ 1.23
RBFOX1-214ENST00000552089 RSF1Q96T23 1441 aaPredicted RBP22.71■■□□□ 1.23
RBFOX1-214ENST00000552089 ILDR1Q86SU0 546 aaPredicted RBP22.67■■□□□ 1.22
RBFOX1-214ENST00000552089 CHD1O14646 1710 aa22.63■■□□□ 1.21
RBFOX1-214ENST00000552089 EIF4G3O43432 1585 aaKnown RBP22.61■■□□□ 1.21
RBFOX1-214ENST00000552089 WIZO95785 1651 aa22.56■■□□□ 1.2
RBFOX1-214ENST00000552089 FBLN2P98095 1184 aa22.54■■□□□ 1.2
RBFOX1-214ENST00000552089 AQRO60306 1485 aaKnown RBP eCLIP22.44■■□□□ 1.18
RBFOX1-214ENST00000552089 TOPBP1Q92547 1522 aa22.42■■□□□ 1.18
RBFOX1-214ENST00000552089 CLASP1Q7Z460 1538 aa22.38■■□□□ 1.17
RBFOX1-214ENST00000552089 PRDM2Q13029 1718 aa22.33■■□□□ 1.16
RBFOX1-214ENST00000552089 TARBP1Q13395 1621 aaKnown RBP22.3■■□□□ 1.16
RBFOX1-214ENST00000552089 SYNJ1O43426 1573 aa22.25■■□□□ 1.15
RBFOX1-214ENST00000552089 ABCC8Q09428 1581 aa22.25■■□□□ 1.15
RBFOX1-214ENST00000552089 GAPVD1Q14C86 1478 aa22.24■■□□□ 1.15
RBFOX1-214ENST00000552089 DNMBPQ6XZF7 1577 aa22.23■■□□□ 1.15
RBFOX1-214ENST00000552089 TOP2AP11388 1531 aaKnown RBP22.22■■□□□ 1.15
RBFOX1-214ENST00000552089 SNAPC4Q5SXM2 1469 aa22.2■■□□□ 1.14
RBFOX1-214ENST00000552089 CHMP7Q8WUX9 453 aaPredicted RBP22.15■■□□□ 1.14
RBFOX1-214ENST00000552089 POLA1P09884 1462 aaPredicted RBP22.12■■□□□ 1.13
RBFOX1-214ENST00000552089 TDRD9Q8NDG6 1382 aaKnown RBP22.11■■□□□ 1.13
RBFOX1-214ENST00000552089 KDM4FA0A1W2PPD8 638 aa22.11■■□□□ 1.13
RBFOX1-214ENST00000552089 RAD54L2Q9Y4B4 1467 aa22.07■■□□□ 1.12
RBFOX1-214ENST00000552089 MAGI1Q96QZ7 1491 aaPredicted RBP22.06■■□□□ 1.12
RBFOX1-214ENST00000552089 SYNJ2O15056 1496 aa22.01■■□□□ 1.11
RBFOX1-214ENST00000552089 KIF13AQ9H1H9 1805 aa21.99■■□□□ 1.11
RBFOX1-214ENST00000552089 SOGA1O94964 1423 aa21.98■■□□□ 1.11
RBFOX1-214ENST00000552089 WDR97A6NE52 1622 aa21.97■■□□□ 1.11
RBFOX1-214ENST00000552089 CCDC88BA6NC98 1476 aa21.97■■□□□ 1.11
RBFOX1-214ENST00000552089 ERCC6L2Q5T890 1561 aa21.95■■□□□ 1.11
RBFOX1-214ENST00000552089 GRIN2BQ13224 1484 aa21.94■■□□□ 1.1
RBFOX1-214ENST00000552089 KDM6BO15054 1643 aa21.82■■□□□ 1.08
RBFOX1-214ENST00000552089 FGD5Q6ZNL6 1462 aa21.82■■□□□ 1.08
RBFOX1-214ENST00000552089 FAM69CQ0P6D2 419 aa21.81■■□□□ 1.08
RBFOX1-214ENST00000552089 CEP170Q5SW79 1584 aa21.79■■□□□ 1.08
RBFOX1-214ENST00000552089 HECW2Q9P2P5 1572 aa21.77■■□□□ 1.08
RBFOX1-214ENST00000552089 ABCC10Q5T3U5 1492 aa21.77■■□□□ 1.08
RBFOX1-214ENST00000552089 PBRM1Q86U86 1689 aa21.74■■□□□ 1.07
RBFOX1-214ENST00000552089 FBXO41Q8TF61 875 aa21.72■■□□□ 1.07
RBFOX1-214ENST00000552089 ADGRL1O94910 1474 aa21.69■■□□□ 1.06
RBFOX1-214ENST00000552089 DIP2BQ9P265 1576 aa21.69■■□□□ 1.06
RBFOX1-214ENST00000552089 GRIN2AQ12879 1464 aa21.66■■□□□ 1.06
RBFOX1-214ENST00000552089 SHROOM2Q13796 1616 aa21.65■■□□□ 1.06
RBFOX1-214ENST00000552089 MAPKBP1O60336 1514 aa21.63■■□□□ 1.05
RBFOX1-214ENST00000552089 NUP160Q12769 1436 aa21.63■■□□□ 1.05
RBFOX1-214ENST00000552089 CUX1P39880 1505 aa21.61■■□□□ 1.05
RBFOX1-214ENST00000552089 NPM1P06748 294 aaKnown RBP eCLIP21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms