RNA–Protein interactions for RNA: ENST00000552069.1

DDX23-212, Transcript of DEAD-box helicase 23, humanhuman

TSL 3

Gene DDX23, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-212ENST00000552069 NISCHQ9Y2I1 1504 aa15.96■□□□□ 0.15
DDX23-212ENST00000552069 CCDC180Q9P1Z9 1646 aa14.44□□□□□ -0.1
DDX23-212ENST00000552069 ABCC9O60706 1549 aa14.33□□□□□ -0.12
DDX23-212ENST00000552069 RB1CC1Q8TDY2 1594 aa13.75□□□□□ -0.21
DDX23-212ENST00000552069 NACADO15069 1562 aa13.69□□□□□ -0.22
DDX23-212ENST00000552069 DNAJC5BQ9UF47 199 aa13.64□□□□□ -0.23
DDX23-212ENST00000552069 MYO15BQ96JP2 1530 aa13.6□□□□□ -0.23
DDX23-212ENST00000552069 UNC13AQ9UPW8 1703 aa13.39□□□□□ -0.27
DDX23-212ENST00000552069 BICRAQ9NZM4 1560 aa13.35□□□□□ -0.27
DDX23-212ENST00000552069 SHROOM4Q9ULL8 1493 aa13.34□□□□□ -0.27
DDX23-212ENST00000552069 DCAF1Q9Y4B6 1507 aa13.33□□□□□ -0.28
DDX23-212ENST00000552069 PABPN1Q86U42 306 aaKnown RBP eCLIP13.28□□□□□ -0.28
DDX23-212ENST00000552069 DCAF8L2P0C7V8 631 aa13.24□□□□□ -0.29
DDX23-212ENST00000552069 ZCCHC6Q5VYS8 1495 aaKnown RBP13.19□□□□□ -0.3
DDX23-212ENST00000552069 CC2D2AQ9P2K1 1620 aa13.03□□□□□ -0.32
DDX23-212ENST00000552069 CECR2Q9BXF3 1484 aa13.01□□□□□ -0.33
DDX23-212ENST00000552069 EIF4G1Q04637 1599 aaKnown RBP13□□□□□ -0.33
DDX23-212ENST00000552069 SCRIBQ14160 1630 aa12.89□□□□□ -0.35
DDX23-212ENST00000552069 DNAJC5Q9H3Z4 198 aa12.74□□□□□ -0.37
DDX23-212ENST00000552069 NCAPD3P42695 1498 aa12.66□□□□□ -0.38
DDX23-212ENST00000552069 CUX2O14529 1486 aa12.6□□□□□ -0.39
DDX23-212ENST00000552069 ATAD2BQ9ULI0 1458 aa12.52□□□□□ -0.41
DDX23-212ENST00000552069 HMGXB3Q12766 1538 aa12.52□□□□□ -0.41
DDX23-212ENST00000552069 SMARCA2P51531 1590 aa12.5□□□□□ -0.41
DDX23-212ENST00000552069 PEG3Q9GZU2 1588 aa12.47□□□□□ -0.41
DDX23-212ENST00000552069 SMARCA4P51532 1647 aa12.44□□□□□ -0.42
DDX23-212ENST00000552069 BAZ1AQ9NRL2 1556 aaPredicted RBP12.4□□□□□ -0.42
DDX23-212ENST00000552069 ERCC6Q03468 1493 aa12.39□□□□□ -0.43
DDX23-212ENST00000552069 LAMC3Q9Y6N6 1575 aa12.35□□□□□ -0.43
DDX23-212ENST00000552069 BAZ1BQ9UIG0 1483 aaKnown RBP12.32□□□□□ -0.44
DDX23-212ENST00000552069 THOC2Q8NI27 1593 aaKnown RBP12.29□□□□□ -0.44
DDX23-212ENST00000552069 NESP48681 1621 aa12.28□□□□□ -0.44
DDX23-212ENST00000552069 PDS5BQ9NTI5 1447 aa12.27□□□□□ -0.45
DDX23-212ENST00000552069 MROH2BQ7Z745 1585 aa12.22□□□□□ -0.45
DDX23-212ENST00000552069 CADPSQ9ULU8 1353 aa12.2□□□□□ -0.46
DDX23-212ENST00000552069 KIF21AQ7Z4S6 1674 aa12.15□□□□□ -0.46
DDX23-212ENST00000552069 WDR62O43379 1518 aa12.12□□□□□ -0.47
DDX23-212ENST00000552069 MRC2Q9UBG0 1479 aa12.1□□□□□ -0.47
DDX23-212ENST00000552069 CFTRP13569 1480 aa12.06□□□□□ -0.48
DDX23-212ENST00000552069 WIZO95785 1651 aa12.02□□□□□ -0.49
DDX23-212ENST00000552069 CEP164Q9UPV0 1460 aa12.02□□□□□ -0.49
DDX23-212ENST00000552069 FANCD2Q9BXW9 1451 aa11.99□□□□□ -0.49
DDX23-212ENST00000552069 OSCARQ8IYS5 282 aa11.96□□□□□ -0.49
DDX23-212ENST00000552069 RSF1Q96T23 1441 aaPredicted RBP11.95□□□□□ -0.5
DDX23-212ENST00000552069 TOP2AP11388 1531 aaKnown RBP11.94□□□□□ -0.5
DDX23-212ENST00000552069 URB2Q14146 1524 aaKnown RBP11.9□□□□□ -0.5
DDX23-212ENST00000552069 PRDM2Q13029 1718 aa11.89□□□□□ -0.51
DDX23-212ENST00000552069 ABCC8Q09428 1581 aa11.86□□□□□ -0.51
DDX23-212ENST00000552069 IFT140Q96RY7 1462 aa11.84□□□□□ -0.51
DDX23-212ENST00000552069 TRIM41Q8WV44 630 aa11.84□□□□□ -0.51
DDX23-212ENST00000552069 CCDC88BA6NC98 1476 aa11.79□□□□□ -0.52
DDX23-212ENST00000552069 TOPBP1Q92547 1522 aa11.76□□□□□ -0.53
DDX23-212ENST00000552069 RIMBP3CA6NJZ7 1639 aa11.75□□□□□ -0.53
DDX23-212ENST00000552069 RIMBP3BA6NNM3 1639 aa11.75□□□□□ -0.53
DDX23-212ENST00000552069 RIMBP3Q9UFD9 1639 aa11.75□□□□□ -0.53
DDX23-212ENST00000552069 DNMBPQ6XZF7 1577 aa11.72□□□□□ -0.53
DDX23-212ENST00000552069 ZNF608Q9ULD9 1512 aaPredicted RBP11.72□□□□□ -0.53
DDX23-212ENST00000552069 ARHGEF11O15085 1522 aa11.71□□□□□ -0.53
DDX23-212ENST00000552069 WDR97A6NE52 1622 aa11.71□□□□□ -0.54
DDX23-212ENST00000552069 TARBP1Q13395 1621 aaKnown RBP11.71□□□□□ -0.54
DDX23-212ENST00000552069 EIF4G3O43432 1585 aaKnown RBP11.67□□□□□ -0.54
DDX23-212ENST00000552069 POLA1P09884 1462 aaPredicted RBP11.63□□□□□ -0.55
DDX23-212ENST00000552069 AQRO60306 1485 aaKnown RBP eCLIP11.61□□□□□ -0.552e-6■□□□□ 8.5
DDX23-212ENST00000552069 CHD1O14646 1710 aa11.59□□□□□ -0.55
DDX23-212ENST00000552069 SOGA1O94964 1423 aa11.58□□□□□ -0.56
DDX23-212ENST00000552069 ARAP1Q96P48 1450 aa11.57□□□□□ -0.56
DDX23-212ENST00000552069 CYB5RLQ6IPT4 315 aa11.57□□□□□ -0.56
DDX23-212ENST00000552069 MAGI1Q96QZ7 1491 aaPredicted RBP11.57□□□□□ -0.56
DDX23-212ENST00000552069 CLASP1Q7Z460 1538 aa11.55□□□□□ -0.56
DDX23-212ENST00000552069 GRIN2BQ13224 1484 aa11.51□□□□□ -0.57
DDX23-212ENST00000552069 RAD54L2Q9Y4B4 1467 aa11.51□□□□□ -0.57
DDX23-212ENST00000552069 SYNJ1O43426 1573 aa11.51□□□□□ -0.57
DDX23-212ENST00000552069 TDRD9Q8NDG6 1382 aaKnown RBP11.5□□□□□ -0.57
DDX23-212ENST00000552069 SYNJ2O15056 1496 aa11.5□□□□□ -0.57
DDX23-212ENST00000552069 FGD5Q6ZNL6 1462 aa11.5□□□□□ -0.57
DDX23-212ENST00000552069 CUX1P39880 1505 aa11.48□□□□□ -0.57
DDX23-212ENST00000552069 SNAPC4Q5SXM2 1469 aa11.47□□□□□ -0.57
DDX23-212ENST00000552069 CHMP7Q8WUX9 453 aaPredicted RBP11.47□□□□□ -0.57
DDX23-212ENST00000552069 ABCA10Q8WWZ4 1543 aa11.46□□□□□ -0.57
DDX23-212ENST00000552069 FBLN2P98095 1184 aa11.45□□□□□ -0.58
DDX23-212ENST00000552069 GAPVD1Q14C86 1478 aa11.44□□□□□ -0.58
DDX23-212ENST00000552069 ABCA5Q8WWZ7 1642 aa11.42□□□□□ -0.58
DDX23-212ENST00000552069 TRHP20396 242 aaPredicted RBP11.41□□□□□ -0.58
DDX23-212ENST00000552069 PBRM1Q86U86 1689 aa11.4□□□□□ -0.59
DDX23-212ENST00000552069 NUP160Q12769 1436 aa11.37□□□□□ -0.59
DDX23-212ENST00000552069 GRIN2AQ12879 1464 aa11.35□□□□□ -0.59
DDX23-212ENST00000552069 SHROOM2Q13796 1616 aa11.35□□□□□ -0.59
DDX23-212ENST00000552069 WRNQ14191 1432 aaPredicted RBP eCLIP11.35□□□□□ -0.59
DDX23-212ENST00000552069 BIVM-ERCC5R4GMW8 1640 aa11.33□□□□□ -0.6
DDX23-212ENST00000552069 ERICH3Q5RHP9 1530 aa11.33□□□□□ -0.6
DDX23-212ENST00000552069 TOP2BQ02880 1626 aa11.32□□□□□ -0.6
DDX23-212ENST00000552069 FHAD1B1AJZ9 1412 aa11.32□□□□□ -0.6
DDX23-212ENST00000552069 ADAMTS12P58397 1594 aa11.29□□□□□ -0.6
DDX23-212ENST00000552069 CEP170Q5SW79 1584 aa11.28□□□□□ -0.6
DDX23-212ENST00000552069 ERCC6L2Q5T890 1561 aa11.24□□□□□ -0.61
DDX23-212ENST00000552069 JPH4Q96JJ6 628 aa11.23□□□□□ -0.61
DDX23-212ENST00000552069 KIF13AQ9H1H9 1805 aa11.21□□□□□ -0.62
DDX23-212ENST00000552069 AEBP2Q6ZN18 517 aaPredicted RBP11.2□□□□□ -0.62
DDX23-212ENST00000552069 MAPKBP1O60336 1514 aa11.19□□□□□ -0.62
DDX23-212ENST00000552069 ABCC10Q5T3U5 1492 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms