RNA–Protein interactions for RNA: ENST00000552018.1

LINC00094-203, humanhuman

TSL 3

Gene LINC00094, Length 802 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00094-203ENST00000552018 NISCHQ9Y2I1 1504 aa32.46■■■□□ 2.79
LINC00094-203ENST00000552018 CCDC180Q9P1Z9 1646 aa28.68■■■□□ 2.18
LINC00094-203ENST00000552018 ABCC9O60706 1549 aa27.46■■□□□ 1.99
LINC00094-203ENST00000552018 ZCCHC6Q5VYS8 1495 aaKnown RBP27.16■■□□□ 1.94
LINC00094-203ENST00000552018 DCAF1Q9Y4B6 1507 aa26.95■■□□□ 1.9
LINC00094-203ENST00000552018 MYO15BQ96JP2 1530 aa26.88■■□□□ 1.89
LINC00094-203ENST00000552018 NACADO15069 1562 aa26.83■■□□□ 1.89
LINC00094-203ENST00000552018 DCAF8L2P0C7V8 631 aa26.78■■□□□ 1.88
LINC00094-203ENST00000552018 RB1CC1Q8TDY2 1594 aa26.71■■□□□ 1.87
LINC00094-203ENST00000552018 UNC13AQ9UPW8 1703 aa26.14■■□□□ 1.77
LINC00094-203ENST00000552018 SCRIBQ14160 1630 aa26.11■■□□□ 1.77
LINC00094-203ENST00000552018 BICRAQ9NZM4 1560 aa25.9■■□□□ 1.74
LINC00094-203ENST00000552018 SHROOM4Q9ULL8 1493 aa25.83■■□□□ 1.73
LINC00094-203ENST00000552018 PABPN1Q86U42 306 aaKnown RBP eCLIP25.71■■□□□ 1.71
LINC00094-203ENST00000552018 CECR2Q9BXF3 1484 aa25.21■■□□□ 1.63
LINC00094-203ENST00000552018 EIF4G1Q04637 1599 aaKnown RBP25.14■■□□□ 1.62
LINC00094-203ENST00000552018 BAZ1AQ9NRL2 1556 aaPredicted RBP25.13■■□□□ 1.61
LINC00094-203ENST00000552018 SMARCA4P51532 1647 aa25.08■■□□□ 1.61
LINC00094-203ENST00000552018 MROH2BQ7Z745 1585 aa25.01■■□□□ 1.59
LINC00094-203ENST00000552018 CC2D2AQ9P2K1 1620 aa24.91■■□□□ 1.58
LINC00094-203ENST00000552018 RSF1Q96T23 1441 aaPredicted RBP24.91■■□□□ 1.58
LINC00094-203ENST00000552018 PEG3Q9GZU2 1588 aa24.88■■□□□ 1.57
LINC00094-203ENST00000552018 ATAD2BQ9ULI0 1458 aa24.82■■□□□ 1.56
LINC00094-203ENST00000552018 SMARCA2P51531 1590 aa24.81■■□□□ 1.56
LINC00094-203ENST00000552018 WIZO95785 1651 aa24.77■■□□□ 1.56
LINC00094-203ENST00000552018 DNAJC5BQ9UF47 199 aa24.75■■□□□ 1.55
LINC00094-203ENST00000552018 NCAPD3P42695 1498 aa24.75■■□□□ 1.55
LINC00094-203ENST00000552018 HMGXB3Q12766 1538 aa24.67■■□□□ 1.54
LINC00094-203ENST00000552018 BAZ1BQ9UIG0 1483 aaKnown RBP24.61■■□□□ 1.53
LINC00094-203ENST00000552018 SUPT5HO00267 1087 aaKnown RBP24.57■■□□□ 1.52
LINC00094-203ENST00000552018 TOP2AP11388 1531 aaKnown RBP24.55■■□□□ 1.52
LINC00094-203ENST00000552018 CCDC88BA6NC98 1476 aa24.25■■□□□ 1.47
LINC00094-203ENST00000552018 CADPSQ9ULU8 1353 aa24.03■■□□□ 1.44
LINC00094-203ENST00000552018 CFTRP13569 1480 aa24■■□□□ 1.43
LINC00094-203ENST00000552018 LAMC3Q9Y6N6 1575 aa24■■□□□ 1.43
LINC00094-203ENST00000552018 NESP48681 1621 aa23.92■■□□□ 1.42
LINC00094-203ENST00000552018 PRDM2Q13029 1718 aa23.9■■□□□ 1.42
LINC00094-203ENST00000552018 PDS5BQ9NTI5 1447 aa23.79■■□□□ 1.4
LINC00094-203ENST00000552018 FANCD2Q9BXW9 1451 aa23.73■■□□□ 1.39
LINC00094-203ENST00000552018 KIF21AQ7Z4S6 1674 aa23.7■■□□□ 1.38
LINC00094-203ENST00000552018 CEP164Q9UPV0 1460 aa23.65■■□□□ 1.38
LINC00094-203ENST00000552018 ERCC6Q03468 1493 aa23.61■■□□□ 1.37
LINC00094-203ENST00000552018 MRC2Q9UBG0 1479 aa23.51■■□□□ 1.35
LINC00094-203ENST00000552018 THOC2Q8NI27 1593 aaKnown RBP23.51■■□□□ 1.35
LINC00094-203ENST00000552018 ABCC8Q09428 1581 aa23.48■■□□□ 1.35
LINC00094-203ENST00000552018 WRNQ14191 1432 aaPredicted RBP eCLIP23.47■■□□□ 1.35
LINC00094-203ENST00000552018 URB2Q14146 1524 aaKnown RBP23.47■■□□□ 1.35
LINC00094-203ENST00000552018 DNMBPQ6XZF7 1577 aa23.45■■□□□ 1.34
LINC00094-203ENST00000552018 WDR62O43379 1518 aa23.45■■□□□ 1.34
LINC00094-203ENST00000552018 CUX1P39880 1505 aa23.43■■□□□ 1.34
LINC00094-203ENST00000552018 TOPBP1Q92547 1522 aa23.42■■□□□ 1.34
LINC00094-203ENST00000552018 BIVM-ERCC5R4GMW8 1640 aa23.4■■□□□ 1.34
LINC00094-203ENST00000552018 TOP2BQ02880 1626 aa23.39■■□□□ 1.33
LINC00094-203ENST00000552018 SYNJ1O43426 1573 aa23.39■■□□□ 1.33
LINC00094-203ENST00000552018 CHIC1Q5VXU3 224 aa23.31■■□□□ 1.32
LINC00094-203ENST00000552018 FGD5Q6ZNL6 1462 aa23.26■■□□□ 1.31
LINC00094-203ENST00000552018 CUX2O14529 1486 aa23.25■■□□□ 1.31
LINC00094-203ENST00000552018 POLA1P09884 1462 aaPredicted RBP23.25■■□□□ 1.31
LINC00094-203ENST00000552018 TRIM41Q8WV44 630 aa23.23■■□□□ 1.31
LINC00094-203ENST00000552018 SOGA1O94964 1423 aa23.16■■□□□ 1.3
LINC00094-203ENST00000552018 IFT140Q96RY7 1462 aa23.15■■□□□ 1.3
LINC00094-203ENST00000552018 TARBP1Q13395 1621 aaKnown RBP23.15■■□□□ 1.3
LINC00094-203ENST00000552018 RAD54L2Q9Y4B4 1467 aa23.12■■□□□ 1.29
LINC00094-203ENST00000552018 WDR97A6NE52 1622 aa23.1■■□□□ 1.29
LINC00094-203ENST00000552018 ABCA10Q8WWZ4 1543 aa23.09■■□□□ 1.29
LINC00094-203ENST00000552018 ZNF608Q9ULD9 1512 aaPredicted RBP22.97■■□□□ 1.27
LINC00094-203ENST00000552018 ABCA5Q8WWZ7 1642 aa22.96■■□□□ 1.27
LINC00094-203ENST00000552018 KIF27Q86VH2 1401 aa22.93■■□□□ 1.26
LINC00094-203ENST00000552018 TDRD9Q8NDG6 1382 aaKnown RBP22.93■■□□□ 1.26
LINC00094-203ENST00000552018 EIF4G3O43432 1585 aaKnown RBP22.93■■□□□ 1.26
LINC00094-203ENST00000552018 AQRO60306 1485 aaKnown RBP eCLIP22.91■■□□□ 1.26
LINC00094-203ENST00000552018 GAPVD1Q14C86 1478 aa22.91■■□□□ 1.26
LINC00094-203ENST00000552018 RUSC2Q8N2Y8 1516 aa22.87■■□□□ 1.25
LINC00094-203ENST00000552018 EEA1Q15075 1411 aa22.87■■□□□ 1.25
LINC00094-203ENST00000552018 PBRM1Q86U86 1689 aa22.84■■□□□ 1.25
LINC00094-203ENST00000552018 ERICH3Q5RHP9 1530 aa22.83■■□□□ 1.25
LINC00094-203ENST00000552018 GRIN2BQ13224 1484 aa22.83■■□□□ 1.25
LINC00094-203ENST00000552018 IGF1RP08069 1367 aa22.79■■□□□ 1.24
LINC00094-203ENST00000552018 MAGI1Q96QZ7 1491 aaPredicted RBP22.73■■□□□ 1.23
LINC00094-203ENST00000552018 CUL7Q14999 1698 aa22.72■■□□□ 1.23
LINC00094-203ENST00000552018 CSRNP3Q8WYN3 585 aa22.72■■□□□ 1.23
LINC00094-203ENST00000552018 SNAPC4Q5SXM2 1469 aa22.71■■□□□ 1.23
LINC00094-203ENST00000552018 ADAMTS12P58397 1594 aa22.68■■□□□ 1.22
LINC00094-203ENST00000552018 FHAD1B1AJZ9 1412 aa22.66■■□□□ 1.22
LINC00094-203ENST00000552018 FAM9AQ8IZU1 332 aaPredicted RBP22.66■■□□□ 1.22
LINC00094-203ENST00000552018 PRXQ9BXM0 1461 aa22.66■■□□□ 1.22
LINC00094-203ENST00000552018 CARMIL1Q5VZK9 1371 aa22.65■■□□□ 1.22
LINC00094-203ENST00000552018 SYNJ2O15056 1496 aa22.63■■□□□ 1.21
LINC00094-203ENST00000552018 KIF21BO75037 1637 aa22.6■■□□□ 1.21
LINC00094-203ENST00000552018 RAPGEF2Q9Y4G8 1499 aa22.59■■□□□ 1.21
LINC00094-203ENST00000552018 GRIN2AQ12879 1464 aa22.54■■□□□ 1.2
LINC00094-203ENST00000552018 CHD1O14646 1710 aa22.54■■□□□ 1.2
LINC00094-203ENST00000552018 CHMP7Q8WUX9 453 aaPredicted RBP22.52■■□□□ 1.2
LINC00094-203ENST00000552018 GOLGA3Q08378 1498 aa22.47■■□□□ 1.19
LINC00094-203ENST00000552018 FBLN2P98095 1184 aa22.46■■□□□ 1.19
LINC00094-203ENST00000552018 NUP160Q12769 1436 aa22.45■■□□□ 1.18
LINC00094-203ENST00000552018 CEP170Q5SW79 1584 aa22.41■■□□□ 1.18
LINC00094-203ENST00000552018 CTTNBP2Q8WZ74 1663 aa22.37■■□□□ 1.17
LINC00094-203ENST00000552018 KIAA0586Q9BVV6 1533 aa22.35■■□□□ 1.17
LINC00094-203ENST00000552018 OSCARQ8IYS5 282 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms