RNA–Protein interactions for RNA: ENST00000552004.2

RACGAP1-225, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 4

Gene RACGAP1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-225ENST00000552004 NISCHQ9Y2I1 1504 aa52.59■■■■■ 6.01
RACGAP1-225ENST00000552004 CCDC180Q9P1Z9 1646 aa47.01■■■■■ 5.12
RACGAP1-225ENST00000552004 ABCC9O60706 1549 aa46.92■■■■■ 5.1
RACGAP1-225ENST00000552004 RB1CC1Q8TDY2 1594 aa44.69■■■■■ 4.75
RACGAP1-225ENST00000552004 NACADO15069 1562 aa44.44■■■■■ 4.71
RACGAP1-225ENST00000552004 DCAF8L2P0C7V8 631 aa44.42■■■■■ 4.7
RACGAP1-225ENST00000552004 MYO15BQ96JP2 1530 aa43.89■■■■■ 4.62
RACGAP1-225ENST00000552004 DNAJC5BQ9UF47 199 aa43.87■■■■■ 4.61
RACGAP1-225ENST00000552004 PABPN1Q86U42 306 aaKnown RBP eCLIP43.78■■■■■ 4.6
RACGAP1-225ENST00000552004 UNC13AQ9UPW8 1703 aa43.63■■■■■ 4.58
RACGAP1-225ENST00000552004 ZCCHC6Q5VYS8 1495 aaKnown RBP43.61■■■■■ 4.57
RACGAP1-225ENST00000552004 DCAF1Q9Y4B6 1507 aa43.42■■■■■ 4.54
RACGAP1-225ENST00000552004 BICRAQ9NZM4 1560 aa43.4■■■■■ 4.54
RACGAP1-225ENST00000552004 SCRIBQ14160 1630 aa42.93■■■■■ 4.46
RACGAP1-225ENST00000552004 SHROOM4Q9ULL8 1493 aa42.79■■■■■ 4.44
RACGAP1-225ENST00000552004 CC2D2AQ9P2K1 1620 aa42.35■■■■■ 4.37
RACGAP1-225ENST00000552004 EIF4G1Q04637 1599 aaKnown RBP42.31■■■■■ 4.36
RACGAP1-225ENST00000552004 CECR2Q9BXF3 1484 aa42.23■■■■■ 4.35
RACGAP1-225ENST00000552004 NCAPD3P42695 1498 aa41.07■■■■■ 4.16
RACGAP1-225ENST00000552004 ATAD2BQ9ULI0 1458 aa40.97■■■■■ 4.15
RACGAP1-225ENST00000552004 SMARCA4P51532 1647 aa40.95■■■■■ 4.15
RACGAP1-225ENST00000552004 SMARCA2P51531 1590 aa40.84■■■■■ 4.13
RACGAP1-225ENST00000552004 BAZ1AQ9NRL2 1556 aaPredicted RBP40.78■■■■■ 4.12
RACGAP1-225ENST00000552004 HMGXB3Q12766 1538 aa40.73■■■■■ 4.11
RACGAP1-225ENST00000552004 BAZ1BQ9UIG0 1483 aaKnown RBP40.58■■■■■ 4.09
RACGAP1-225ENST00000552004 MROH2BQ7Z745 1585 aa40.55■■■■■ 4.08
RACGAP1-225ENST00000552004 PEG3Q9GZU2 1588 aa40.53■■■■■ 4.08
RACGAP1-225ENST00000552004 ERCC6Q03468 1493 aa40.48■■■■■ 4.07
RACGAP1-225ENST00000552004 NESP48681 1621 aa40.37■■■■■ 4.05
RACGAP1-225ENST00000552004 CUX2O14529 1486 aa40.29■■■■■ 4.04
RACGAP1-225ENST00000552004 DNAJC5Q9H3Z4 198 aa40.09■■■■■ 4.01
RACGAP1-225ENST00000552004 LAMC3Q9Y6N6 1575 aa40.06■■■■■ 4
RACGAP1-225ENST00000552004 WIZO95785 1651 aa40.05■■■■■ 4
RACGAP1-225ENST00000552004 PDS5BQ9NTI5 1447 aa39.87■■■■□ 3.97
RACGAP1-225ENST00000552004 CADPSQ9ULU8 1353 aa39.84■■■■□ 3.97
RACGAP1-225ENST00000552004 THOC2Q8NI27 1593 aaKnown RBP39.84■■■■□ 3.97
RACGAP1-225ENST00000552004 RSF1Q96T23 1441 aaPredicted RBP39.81■■■■□ 3.96
RACGAP1-225ENST00000552004 KIF21AQ7Z4S6 1674 aa39.78■■■■□ 3.96
RACGAP1-225ENST00000552004 TOP2AP11388 1531 aaKnown RBP39.55■■■■□ 3.92
RACGAP1-225ENST00000552004 MRC2Q9UBG0 1479 aa39.49■■■■□ 3.91
RACGAP1-225ENST00000552004 CFTRP13569 1480 aa39.42■■■■□ 3.9
RACGAP1-225ENST00000552004 CEP164Q9UPV0 1460 aa39.39■■■■□ 3.9
RACGAP1-225ENST00000552004 FANCD2Q9BXW9 1451 aa39.38■■■■□ 3.9
RACGAP1-225ENST00000552004 WDR62O43379 1518 aa39.37■■■■□ 3.89
RACGAP1-225ENST00000552004 CCDC88BA6NC98 1476 aa39.15■■■■□ 3.86
RACGAP1-225ENST00000552004 URB2Q14146 1524 aaKnown RBP39.04■■■■□ 3.84
RACGAP1-225ENST00000552004 PRDM2Q13029 1718 aa38.92■■■■□ 3.82
RACGAP1-225ENST00000552004 TOPBP1Q92547 1522 aa38.65■■■■□ 3.78
RACGAP1-225ENST00000552004 IFT140Q96RY7 1462 aa38.6■■■■□ 3.77
RACGAP1-225ENST00000552004 OSCARQ8IYS5 282 aa38.57■■■■□ 3.76
RACGAP1-225ENST00000552004 ABCC8Q09428 1581 aa38.57■■■■□ 3.76
RACGAP1-225ENST00000552004 ZNF608Q9ULD9 1512 aaPredicted RBP38.54■■■■□ 3.76
RACGAP1-225ENST00000552004 DNMBPQ6XZF7 1577 aa38.5■■■■□ 3.75
RACGAP1-225ENST00000552004 TRIM41Q8WV44 630 aa38.46■■■■□ 3.75
RACGAP1-225ENST00000552004 SUPT5HO00267 1087 aaKnown RBP38.29■■■■□ 3.72
RACGAP1-225ENST00000552004 POLA1P09884 1462 aaPredicted RBP38.28■■■■□ 3.72
RACGAP1-225ENST00000552004 EIF4G3O43432 1585 aaKnown RBP38.27■■■■□ 3.72
RACGAP1-225ENST00000552004 TARBP1Q13395 1621 aaKnown RBP38.27■■■■□ 3.72
RACGAP1-225ENST00000552004 AQRO60306 1485 aaKnown RBP eCLIP38.24■■■■□ 3.71
RACGAP1-225ENST00000552004 RAD54L2Q9Y4B4 1467 aa38.16■■■■□ 3.7
RACGAP1-225ENST00000552004 SOGA1O94964 1423 aa38.14■■■■□ 3.7
RACGAP1-225ENST00000552004 CUX1P39880 1505 aa38.07■■■■□ 3.69
RACGAP1-225ENST00000552004 FGD5Q6ZNL6 1462 aa38.07■■■■□ 3.68
RACGAP1-225ENST00000552004 TDRD9Q8NDG6 1382 aaKnown RBP38.06■■■■□ 3.68
RACGAP1-225ENST00000552004 FBLN2P98095 1184 aa37.99■■■■□ 3.67
RACGAP1-225ENST00000552004 RIMBP3CA6NJZ7 1639 aa37.97■■■■□ 3.67
RACGAP1-225ENST00000552004 RIMBP3BA6NNM3 1639 aa37.97■■■■□ 3.67
RACGAP1-225ENST00000552004 RIMBP3Q9UFD9 1639 aa37.97■■■■□ 3.67
RACGAP1-225ENST00000552004 CHD1O14646 1710 aa37.93■■■■□ 3.66
RACGAP1-225ENST00000552004 ARHGEF11O15085 1522 aa37.89■■■■□ 3.66
RACGAP1-225ENST00000552004 WDR97A6NE52 1622 aa37.84■■■■□ 3.65
RACGAP1-225ENST00000552004 SNAPC4Q5SXM2 1469 aa37.82■■■■□ 3.64
RACGAP1-225ENST00000552004 GRIN2BQ13224 1484 aa37.75■■■■□ 3.63
RACGAP1-225ENST00000552004 CHMP7Q8WUX9 453 aaPredicted RBP37.72■■■■□ 3.63
RACGAP1-225ENST00000552004 MAGI1Q96QZ7 1491 aaPredicted RBP37.71■■■■□ 3.63
RACGAP1-225ENST00000552004 CYB5RLQ6IPT4 315 aa37.68■■■■□ 3.62
RACGAP1-225ENST00000552004 GAPVD1Q14C86 1478 aa37.65■■■■□ 3.62
RACGAP1-225ENST00000552004 ABCA10Q8WWZ4 1543 aa37.64■■■■□ 3.62
RACGAP1-225ENST00000552004 SYNJ2O15056 1496 aa37.59■■■■□ 3.61
RACGAP1-225ENST00000552004 WRNQ14191 1432 aaPredicted RBP eCLIP37.56■■■■□ 3.6
RACGAP1-225ENST00000552004 PBRM1Q86U86 1689 aa37.55■■■■□ 3.6
RACGAP1-225ENST00000552004 ARAP1Q96P48 1450 aa37.54■■■■□ 3.6
RACGAP1-225ENST00000552004 CLASP1Q7Z460 1538 aa37.53■■■■□ 3.6
RACGAP1-225ENST00000552004 SYNJ1O43426 1573 aa37.53■■■■□ 3.6
RACGAP1-225ENST00000552004 ABCA5Q8WWZ7 1642 aa37.53■■■■□ 3.6
RACGAP1-225ENST00000552004 TOP2BQ02880 1626 aa37.49■■■■□ 3.59
RACGAP1-225ENST00000552004 BIVM-ERCC5R4GMW8 1640 aa37.47■■■■□ 3.59
RACGAP1-225ENST00000552004 GRIN2AQ12879 1464 aa37.26■■■■□ 3.56
RACGAP1-225ENST00000552004 ADAMTS12P58397 1594 aa37.24■■■■□ 3.55
RACGAP1-225ENST00000552004 TRHP20396 242 aaPredicted RBP37.19■■■■□ 3.54
RACGAP1-225ENST00000552004 FHAD1B1AJZ9 1412 aa37.19■■■■□ 3.54
RACGAP1-225ENST00000552004 ERICH3Q5RHP9 1530 aa37.15■■■■□ 3.54
RACGAP1-225ENST00000552004 NUP160Q12769 1436 aa37.12■■■■□ 3.53
RACGAP1-225ENST00000552004 CEP170Q5SW79 1584 aa37.11■■■■□ 3.53
RACGAP1-225ENST00000552004 ERCC6L2Q5T890 1561 aa37■■■■□ 3.51
RACGAP1-225ENST00000552004 SHROOM2Q13796 1616 aa36.89■■■■□ 3.5
RACGAP1-225ENST00000552004 JPH4Q96JJ6 628 aa36.81■■■■□ 3.48
RACGAP1-225ENST00000552004 KIF27Q86VH2 1401 aa36.81■■■■□ 3.48
RACGAP1-225ENST00000552004 IGF1RP08069 1367 aa36.8■■■■□ 3.48
RACGAP1-225ENST00000552004 PRG4Q92954 1404 aaPredicted RBP36.79■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 276.2 ms