RNA–Protein interactions for RNA: ENST00000551969.5

SP1-204, Transcript of Sp1 transcription factor, humanhuman

TSL 3

Gene SP1, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-204ENST00000551969 NISCHQ9Y2I1 1504 aa28.23■■■□□ 2.11
SP1-204ENST00000551969 CHIC1Q5VXU3 224 aa25.48■■□□□ 1.67
SP1-204ENST00000551969 AEBP2Q6ZN18 517 aaPredicted RBP25.4■■□□□ 1.66
SP1-204ENST00000551969 CCDC180Q9P1Z9 1646 aa25.01■■□□□ 1.59
SP1-204ENST00000551969 ABCC9O60706 1549 aa24.81■■□□□ 1.56
SP1-204ENST00000551969 DCAF8L2P0C7V8 631 aa24.06■■□□□ 1.44
SP1-204ENST00000551969 RB1CC1Q8TDY2 1594 aa23.79■■□□□ 1.4
SP1-204ENST00000551969 NACADO15069 1562 aa23.73■■□□□ 1.39
SP1-204ENST00000551969 MYO15BQ96JP2 1530 aa23.53■■□□□ 1.36
SP1-204ENST00000551969 ZCCHC6Q5VYS8 1495 aaKnown RBP23.42■■□□□ 1.34
SP1-204ENST00000551969 DCAF1Q9Y4B6 1507 aa23.34■■□□□ 1.33
SP1-204ENST00000551969 PABPN1Q86U42 306 aaKnown RBP eCLIP23.3■■□□□ 1.32
SP1-204ENST00000551969 DNAJC5BQ9UF47 199 aa22.92■■□□□ 1.26
SP1-204ENST00000551969 SCRIBQ14160 1630 aa22.87■■□□□ 1.25
SP1-204ENST00000551969 BICRAQ9NZM4 1560 aa22.87■■□□□ 1.25
SP1-204ENST00000551969 SHROOM4Q9ULL8 1493 aa22.84■■□□□ 1.25
SP1-204ENST00000551969 UNC13AQ9UPW8 1703 aa22.83■■□□□ 1.25
SP1-204ENST00000551969 PHF23Q9BUL5 403 aaPredicted RBP22.52■■□□□ 1.2
SP1-204ENST00000551969 EIF4G1Q04637 1599 aaKnown RBP22.4■■□□□ 1.18
SP1-204ENST00000551969 CECR2Q9BXF3 1484 aa22.36■■□□□ 1.17
SP1-204ENST00000551969 CC2D2AQ9P2K1 1620 aa22.32■■□□□ 1.16
SP1-204ENST00000551969 NCAPD3P42695 1498 aa21.95■■□□□ 1.1
SP1-204ENST00000551969 BAZ1AQ9NRL2 1556 aaPredicted RBP21.92■■□□□ 1.1
SP1-204ENST00000551969 ATAD2BQ9ULI0 1458 aa21.9■■□□□ 1.1
SP1-204ENST00000551969 SMARCA2P51531 1590 aa21.87■■□□□ 1.09
SP1-204ENST00000551969 SMARCA4P51532 1647 aa21.84■■□□□ 1.09
SP1-204ENST00000551969 BAZ1BQ9UIG0 1483 aaKnown RBP21.76■■□□□ 1.07
SP1-204ENST00000551969 HMGXB3Q12766 1538 aa21.71■■□□□ 1.07
SP1-204ENST00000551969 MROH2BQ7Z745 1585 aa21.7■■□□□ 1.06
SP1-204ENST00000551969 PEG3Q9GZU2 1588 aa21.64■■□□□ 1.05
SP1-204ENST00000551969 ERCC6Q03468 1493 aa21.53■■□□□ 1.04
SP1-204ENST00000551969 RSF1Q96T23 1441 aaPredicted RBP21.5■■□□□ 1.03
SP1-204ENST00000551969 SENP3Q9H4L4 574 aaPredicted RBP21.41■■□□□ 1.02
SP1-204ENST00000551969 PDS5BQ9NTI5 1447 aa21.38■■□□□ 1.01
SP1-204ENST00000551969 WIZO95785 1651 aa21.37■■□□□ 1.01
SP1-204ENST00000551969 CADPSQ9ULU8 1353 aa21.37■■□□□ 1.01
SP1-204ENST00000551969 NESP48681 1621 aa21.34■■□□□ 1.01
SP1-204ENST00000551969 LAMC3Q9Y6N6 1575 aa21.32■■□□□ 1
SP1-204ENST00000551969 CUX2O14529 1486 aa21.26■□□□□ 0.99
SP1-204ENST00000551969 TOP2AP11388 1531 aaKnown RBP21.24■□□□□ 0.99
SP1-204ENST00000551969 CFTRP13569 1480 aa21.12■□□□□ 0.97
SP1-204ENST00000551969 SUPT5HO00267 1087 aaKnown RBP21.08■□□□□ 0.97
SP1-204ENST00000551969 CCDC88BA6NC98 1476 aa21.07■□□□□ 0.96
SP1-204ENST00000551969 FANCD2Q9BXW9 1451 aa21.05■□□□□ 0.96
SP1-204ENST00000551969 CEP164Q9UPV0 1460 aa21.04■□□□□ 0.96
SP1-204ENST00000551969 MRC2Q9UBG0 1479 aa21.02■□□□□ 0.96
SP1-204ENST00000551969 PLPPR3Q6T4P5 718 aa21■□□□□ 0.95
SP1-204ENST00000551969 DNAJC5Q9H3Z4 198 aa20.93■□□□□ 0.94
SP1-204ENST00000551969 THOC2Q8NI27 1593 aaKnown RBP20.92■□□□□ 0.94
SP1-204ENST00000551969 KIF21AQ7Z4S6 1674 aa20.91■□□□□ 0.94
SP1-204ENST00000551969 WDR62O43379 1518 aa20.85■□□□□ 0.93
SP1-204ENST00000551969 ABCC8Q09428 1581 aa20.8■□□□□ 0.92
SP1-204ENST00000551969 URB2Q14146 1524 aaKnown RBP20.73■□□□□ 0.91
SP1-204ENST00000551969 IFT140Q96RY7 1462 aa20.64■□□□□ 0.89
SP1-204ENST00000551969 TOPBP1Q92547 1522 aa20.63■□□□□ 0.89
SP1-204ENST00000551969 OSCARQ8IYS5 282 aa20.6■□□□□ 0.89
SP1-204ENST00000551969 PRDM2Q13029 1718 aa20.59■□□□□ 0.89
SP1-204ENST00000551969 DNMBPQ6XZF7 1577 aa20.57■□□□□ 0.88
SP1-204ENST00000551969 SOGA1O94964 1423 aa20.53■□□□□ 0.88
SP1-204ENST00000551969 POLA1P09884 1462 aaPredicted RBP20.44■□□□□ 0.86
SP1-204ENST00000551969 FBLN2P98095 1184 aa20.44■□□□□ 0.86
SP1-204ENST00000551969 ZNF608Q9ULD9 1512 aaPredicted RBP20.43■□□□□ 0.86
SP1-204ENST00000551969 AQRO60306 1485 aaKnown RBP eCLIP20.41■□□□□ 0.861e-6■■■□□ 16.1
SP1-204ENST00000551969 TDRD9Q8NDG6 1382 aaKnown RBP20.4■□□□□ 0.86
SP1-204ENST00000551969 FGD5Q6ZNL6 1462 aa20.38■□□□□ 0.85
SP1-204ENST00000551969 RAD54L2Q9Y4B4 1467 aa20.38■□□□□ 0.85
SP1-204ENST00000551969 CUX1P39880 1505 aa20.36■□□□□ 0.85
SP1-204ENST00000551969 CHMP7Q8WUX9 453 aaPredicted RBP20.35■□□□□ 0.85
SP1-204ENST00000551969 WRNQ14191 1432 aaPredicted RBP eCLIP20.35■□□□□ 0.85
SP1-204ENST00000551969 TARBP1Q13395 1621 aaKnown RBP20.29■□□□□ 0.84
SP1-204ENST00000551969 EIF4G3O43432 1585 aaKnown RBP20.25■□□□□ 0.83
SP1-204ENST00000551969 GRIN2BQ13224 1484 aa20.24■□□□□ 0.83
SP1-204ENST00000551969 TRIM41Q8WV44 630 aa20.24■□□□□ 0.83
SP1-204ENST00000551969 WDR97A6NE52 1622 aa20.23■□□□□ 0.83
SP1-204ENST00000551969 GAPVD1Q14C86 1478 aa20.22■□□□□ 0.83
SP1-204ENST00000551969 ABCA10Q8WWZ4 1543 aa20.2■□□□□ 0.82
SP1-204ENST00000551969 MAGI1Q96QZ7 1491 aaPredicted RBP20.18■□□□□ 0.82
SP1-204ENST00000551969 SNAPC4Q5SXM2 1469 aa20.16■□□□□ 0.82
SP1-204ENST00000551969 TOP2BQ02880 1626 aa20.15■□□□□ 0.82
SP1-204ENST00000551969 SYNJ2O15056 1496 aa20.11■□□□□ 0.81
SP1-204ENST00000551969 SYNJ1O43426 1573 aa20.07■□□□□ 0.8
SP1-204ENST00000551969 BIVM-ERCC5R4GMW8 1640 aa20.05■□□□□ 0.8
SP1-204ENST00000551969 CYB5RLQ6IPT4 315 aa20.05■□□□□ 0.8
SP1-204ENST00000551969 FHAD1B1AJZ9 1412 aa20.01■□□□□ 0.79
SP1-204ENST00000551969 KIF27Q86VH2 1401 aa20.01■□□□□ 0.79
SP1-204ENST00000551969 ABCA5Q8WWZ7 1642 aa19.96■□□□□ 0.79
SP1-204ENST00000551969 ARHGEF11O15085 1522 aa19.96■□□□□ 0.79
SP1-204ENST00000551969 ERICH3Q5RHP9 1530 aa19.96■□□□□ 0.79
SP1-204ENST00000551969 CHD1O14646 1710 aa19.93■□□□□ 0.78
SP1-204ENST00000551969 GRIN2AQ12879 1464 aa19.92■□□□□ 0.78
SP1-204ENST00000551969 IGF1RP08069 1367 aa19.9■□□□□ 0.78
SP1-204ENST00000551969 PBRM1Q86U86 1689 aa19.89■□□□□ 0.77
SP1-204ENST00000551969 RIMBP3CA6NJZ7 1639 aa19.88■□□□□ 0.77
SP1-204ENST00000551969 RIMBP3BA6NNM3 1639 aa19.88■□□□□ 0.77
SP1-204ENST00000551969 RIMBP3Q9UFD9 1639 aa19.88■□□□□ 0.77
SP1-204ENST00000551969 JPH4Q96JJ6 628 aa19.84■□□□□ 0.77
SP1-204ENST00000551969 CLASP1Q7Z460 1538 aa19.83■□□□□ 0.77
SP1-204ENST00000551969 NUP160Q12769 1436 aa19.82■□□□□ 0.76
SP1-204ENST00000551969 ADAMTS12P58397 1594 aa19.82■□□□□ 0.76
SP1-204ENST00000551969 CARMIL1Q5VZK9 1371 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms