RNA–Protein interactions for RNA: ENST00000551931.5

LETMD1-231, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-231ENST00000551931 NISCHQ9Y2I1 1504 aa31.92■■■□□ 2.7
LETMD1-231ENST00000551931 ABCC9O60706 1549 aa28.79■■■□□ 2.2
LETMD1-231ENST00000551931 CCDC180Q9P1Z9 1646 aa28.76■■■□□ 2.2
LETMD1-231ENST00000551931 RB1CC1Q8TDY2 1594 aa27.37■■□□□ 1.97
LETMD1-231ENST00000551931 NACADO15069 1562 aa27.14■■□□□ 1.94
LETMD1-231ENST00000551931 DNAJC5BQ9UF47 199 aa27.07■■□□□ 1.92
LETMD1-231ENST00000551931 UNC13AQ9UPW8 1703 aa26.93■■□□□ 1.9
LETMD1-231ENST00000551931 DCAF8L2P0C7V8 631 aa26.88■■□□□ 1.89
LETMD1-231ENST00000551931 PABPN1Q86U42 306 aaKnown RBP eCLIP26.73■■□□□ 1.87
LETMD1-231ENST00000551931 MYO15BQ96JP2 1530 aa26.71■■□□□ 1.87
LETMD1-231ENST00000551931 BICRAQ9NZM4 1560 aa26.63■■□□□ 1.85
LETMD1-231ENST00000551931 ZCCHC6Q5VYS8 1495 aaKnown RBP26.44■■□□□ 1.82
LETMD1-231ENST00000551931 DCAF1Q9Y4B6 1507 aa26.34■■□□□ 1.81
LETMD1-231ENST00000551931 SCRIBQ14160 1630 aa26.19■■□□□ 1.78
LETMD1-231ENST00000551931 SHROOM4Q9ULL8 1493 aa26.17■■□□□ 1.78
LETMD1-231ENST00000551931 CC2D2AQ9P2K1 1620 aa26.05■■□□□ 1.76
LETMD1-231ENST00000551931 EIF4G1Q04637 1599 aaKnown RBP25.95■■□□□ 1.75
LETMD1-231ENST00000551931 CECR2Q9BXF3 1484 aa25.92■■□□□ 1.74
LETMD1-231ENST00000551931 NCAPD3P42695 1498 aa25.02■■□□□ 1.6
LETMD1-231ENST00000551931 SMARCA4P51532 1647 aa24.97■■□□□ 1.59
LETMD1-231ENST00000551931 ATAD2BQ9ULI0 1458 aa24.96■■□□□ 1.59
LETMD1-231ENST00000551931 DNAJC5Q9H3Z4 198 aa24.89■■□□□ 1.58
LETMD1-231ENST00000551931 SMARCA2P51531 1590 aa24.88■■□□□ 1.57
LETMD1-231ENST00000551931 HMGXB3Q12766 1538 aa24.88■■□□□ 1.57
LETMD1-231ENST00000551931 CUX2O14529 1486 aa24.83■■□□□ 1.56
LETMD1-231ENST00000551931 ERCC6Q03468 1493 aa24.83■■□□□ 1.56
LETMD1-231ENST00000551931 BAZ1AQ9NRL2 1556 aaPredicted RBP24.78■■□□□ 1.56
LETMD1-231ENST00000551931 NESP48681 1621 aa24.73■■□□□ 1.55
LETMD1-231ENST00000551931 PEG3Q9GZU2 1588 aa24.71■■□□□ 1.55
LETMD1-231ENST00000551931 BAZ1BQ9UIG0 1483 aaKnown RBP24.7■■□□□ 1.55
LETMD1-231ENST00000551931 MROH2BQ7Z745 1585 aa24.62■■□□□ 1.53
LETMD1-231ENST00000551931 THOC2Q8NI27 1593 aaKnown RBP24.54■■□□□ 1.52
LETMD1-231ENST00000551931 LAMC3Q9Y6N6 1575 aa24.53■■□□□ 1.52
LETMD1-231ENST00000551931 KIF21AQ7Z4S6 1674 aa24.5■■□□□ 1.51
LETMD1-231ENST00000551931 WIZO95785 1651 aa24.37■■□□□ 1.49
LETMD1-231ENST00000551931 PDS5BQ9NTI5 1447 aa24.31■■□□□ 1.48
LETMD1-231ENST00000551931 CADPSQ9ULU8 1353 aa24.24■■□□□ 1.47
LETMD1-231ENST00000551931 MRC2Q9UBG0 1479 aa24.16■■□□□ 1.46
LETMD1-231ENST00000551931 WDR62O43379 1518 aa24.15■■□□□ 1.46
LETMD1-231ENST00000551931 CEP164Q9UPV0 1460 aa24.05■■□□□ 1.44
LETMD1-231ENST00000551931 RSF1Q96T23 1441 aaPredicted RBP24.01■■□□□ 1.43
LETMD1-231ENST00000551931 FANCD2Q9BXW9 1451 aa24■■□□□ 1.43
LETMD1-231ENST00000551931 TOP2AP11388 1531 aaKnown RBP24■■□□□ 1.43
LETMD1-231ENST00000551931 CFTRP13569 1480 aa23.98■■□□□ 1.43
LETMD1-231ENST00000551931 PRDM2Q13029 1718 aa23.9■■□□□ 1.42
LETMD1-231ENST00000551931 URB2Q14146 1524 aaKnown RBP23.84■■□□□ 1.41
LETMD1-231ENST00000551931 TRIM41Q8WV44 630 aa23.76■■□□□ 1.39
LETMD1-231ENST00000551931 CCDC88BA6NC98 1476 aa23.7■■□□□ 1.38
LETMD1-231ENST00000551931 OSCARQ8IYS5 282 aa23.61■■□□□ 1.37
LETMD1-231ENST00000551931 ZNF608Q9ULD9 1512 aaPredicted RBP23.57■■□□□ 1.36
LETMD1-231ENST00000551931 TOPBP1Q92547 1522 aa23.56■■□□□ 1.36
LETMD1-231ENST00000551931 IFT140Q96RY7 1462 aa23.55■■□□□ 1.36
LETMD1-231ENST00000551931 EIF4G3O43432 1585 aaKnown RBP23.48■■□□□ 1.35
LETMD1-231ENST00000551931 DNMBPQ6XZF7 1577 aa23.48■■□□□ 1.35
LETMD1-231ENST00000551931 RIMBP3CA6NJZ7 1639 aa23.47■■□□□ 1.35
LETMD1-231ENST00000551931 RIMBP3BA6NNM3 1639 aa23.47■■□□□ 1.35
LETMD1-231ENST00000551931 RIMBP3Q9UFD9 1639 aa23.47■■□□□ 1.35
LETMD1-231ENST00000551931 ABCC8Q09428 1581 aa23.44■■□□□ 1.34
LETMD1-231ENST00000551931 TARBP1Q13395 1621 aaKnown RBP23.41■■□□□ 1.34
LETMD1-231ENST00000551931 CHD1O14646 1710 aa23.38■■□□□ 1.33
LETMD1-231ENST00000551931 ARHGEF11O15085 1522 aa23.33■■□□□ 1.33
LETMD1-231ENST00000551931 POLA1P09884 1462 aaPredicted RBP23.31■■□□□ 1.32
LETMD1-231ENST00000551931 AQRO60306 1485 aaKnown RBP eCLIP23.3■■□□□ 1.321e-6■■□□□ 13.5
LETMD1-231ENST00000551931 RAD54L2Q9Y4B4 1467 aa23.22■■□□□ 1.31
LETMD1-231ENST00000551931 FGD5Q6ZNL6 1462 aa23.15■■□□□ 1.3
LETMD1-231ENST00000551931 SOGA1O94964 1423 aa23.15■■□□□ 1.3
LETMD1-231ENST00000551931 CUX1P39880 1505 aa23.13■■□□□ 1.29
LETMD1-231ENST00000551931 TDRD9Q8NDG6 1382 aaKnown RBP23.13■■□□□ 1.29
LETMD1-231ENST00000551931 WDR97A6NE52 1622 aa23.12■■□□□ 1.29
LETMD1-231ENST00000551931 FBLN2P98095 1184 aa23.11■■□□□ 1.29
LETMD1-231ENST00000551931 ARAP1Q96P48 1450 aa23.1■■□□□ 1.29
LETMD1-231ENST00000551931 CYB5RLQ6IPT4 315 aa23.09■■□□□ 1.29
LETMD1-231ENST00000551931 SNAPC4Q5SXM2 1469 aa23.09■■□□□ 1.29
LETMD1-231ENST00000551931 CLASP1Q7Z460 1538 aa23.03■■□□□ 1.28
LETMD1-231ENST00000551931 PBRM1Q86U86 1689 aa23.03■■□□□ 1.28
LETMD1-231ENST00000551931 MAGI1Q96QZ7 1491 aaPredicted RBP23■■□□□ 1.27
LETMD1-231ENST00000551931 GRIN2BQ13224 1484 aa22.98■■□□□ 1.27
LETMD1-231ENST00000551931 SYNJ1O43426 1573 aa22.97■■□□□ 1.27
LETMD1-231ENST00000551931 SYNJ2O15056 1496 aa22.92■■□□□ 1.26
LETMD1-231ENST00000551931 ABCA5Q8WWZ7 1642 aa22.92■■□□□ 1.26
LETMD1-231ENST00000551931 CHMP7Q8WUX9 453 aaPredicted RBP22.91■■□□□ 1.26
LETMD1-231ENST00000551931 GAPVD1Q14C86 1478 aa22.9■■□□□ 1.26
LETMD1-231ENST00000551931 ABCA10Q8WWZ4 1543 aa22.87■■□□□ 1.25
LETMD1-231ENST00000551931 TRHP20396 242 aaPredicted RBP22.85■■□□□ 1.25
LETMD1-231ENST00000551931 SUPT5HO00267 1087 aaKnown RBP22.83■■□□□ 1.25
LETMD1-231ENST00000551931 BIVM-ERCC5R4GMW8 1640 aa22.79■■□□□ 1.24
LETMD1-231ENST00000551931 TOP2BQ02880 1626 aa22.75■■□□□ 1.23
LETMD1-231ENST00000551931 ADAMTS12P58397 1594 aa22.74■■□□□ 1.23
LETMD1-231ENST00000551931 WRNQ14191 1432 aaPredicted RBP eCLIP22.71■■□□□ 1.23
LETMD1-231ENST00000551931 GRIN2AQ12879 1464 aa22.71■■□□□ 1.23
LETMD1-231ENST00000551931 ERCC6L2Q5T890 1561 aa22.69■■□□□ 1.22
LETMD1-231ENST00000551931 CEP170Q5SW79 1584 aa22.68■■□□□ 1.22
LETMD1-231ENST00000551931 NUP160Q12769 1436 aa22.63■■□□□ 1.21
LETMD1-231ENST00000551931 SHROOM2Q13796 1616 aa22.61■■□□□ 1.21
LETMD1-231ENST00000551931 FHAD1B1AJZ9 1412 aa22.58■■□□□ 1.21
LETMD1-231ENST00000551931 ERICH3Q5RHP9 1530 aa22.58■■□□□ 1.21
LETMD1-231ENST00000551931 KIF13AQ9H1H9 1805 aa22.43■■□□□ 1.18
LETMD1-231ENST00000551931 RUSC2Q8N2Y8 1516 aa22.43■■□□□ 1.18
LETMD1-231ENST00000551931 PRG4Q92954 1404 aaPredicted RBP22.4■■□□□ 1.18
LETMD1-231ENST00000551931 JPH4Q96JJ6 628 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms