RNA–Protein interactions for RNA: ENST00000551728.5

CPM-212, Transcript of carboxypeptidase M, humanhuman

TSL 5

Gene CPM, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPM-212ENST00000551728 NISCHQ9Y2I1 1504 aa39.8■■■■□ 3.96
CPM-212ENST00000551728 CCDC180Q9P1Z9 1646 aa35.21■■■■□ 3.23
CPM-212ENST00000551728 ABCC9O60706 1549 aa34.96■■■■□ 3.19
CPM-212ENST00000551728 DNAJC5BQ9UF47 199 aa33.71■■■□□ 2.99
CPM-212ENST00000551728 NACADO15069 1562 aa33.17■■■□□ 2.9
CPM-212ENST00000551728 ZCCHC6Q5VYS8 1495 aaKnown RBP33.17■■■□□ 2.9
CPM-212ENST00000551728 MYO15BQ96JP2 1530 aa33.17■■■□□ 2.9
CPM-212ENST00000551728 DCAF8L2P0C7V8 631 aa33.11■■■□□ 2.89
CPM-212ENST00000551728 RB1CC1Q8TDY2 1594 aa33.09■■■□□ 2.89
CPM-212ENST00000551728 DCAF1Q9Y4B6 1507 aa33.06■■■□□ 2.88
CPM-212ENST00000551728 PABPN1Q86U42 306 aaKnown RBP eCLIP32.48■■■□□ 2.79
CPM-212ENST00000551728 UNC13AQ9UPW8 1703 aa32.06■■■□□ 2.72
CPM-212ENST00000551728 SCRIBQ14160 1630 aa31.99■■■□□ 2.71
CPM-212ENST00000551728 BICRAQ9NZM4 1560 aa31.98■■■□□ 2.71
CPM-212ENST00000551728 SHROOM4Q9ULL8 1493 aa31.91■■■□□ 2.7
CPM-212ENST00000551728 CECR2Q9BXF3 1484 aa31.58■■■□□ 2.65
CPM-212ENST00000551728 DNAJC5Q9H3Z4 198 aa31.57■■■□□ 2.64
CPM-212ENST00000551728 CC2D2AQ9P2K1 1620 aa31.47■■■□□ 2.63
CPM-212ENST00000551728 EIF4G1Q04637 1599 aaKnown RBP31.18■■■□□ 2.58
CPM-212ENST00000551728 BAZ1AQ9NRL2 1556 aaPredicted RBP30.83■■■□□ 2.53
CPM-212ENST00000551728 SMARCA4P51532 1647 aa30.73■■■□□ 2.51
CPM-212ENST00000551728 NCAPD3P42695 1498 aa30.66■■■□□ 2.5
CPM-212ENST00000551728 ATAD2BQ9ULI0 1458 aa30.62■■■□□ 2.49
CPM-212ENST00000551728 SMARCA2P51531 1590 aa30.61■■■□□ 2.49
CPM-212ENST00000551728 MROH2BQ7Z745 1585 aa30.58■■■□□ 2.49
CPM-212ENST00000551728 PEG3Q9GZU2 1588 aa30.56■■■□□ 2.48
CPM-212ENST00000551728 CUX2O14529 1486 aa30.43■■■□□ 2.46
CPM-212ENST00000551728 HMGXB3Q12766 1538 aa30.42■■■□□ 2.46
CPM-212ENST00000551728 RSF1Q96T23 1441 aaPredicted RBP30.41■■■□□ 2.46
CPM-212ENST00000551728 BAZ1BQ9UIG0 1483 aaKnown RBP30.33■■■□□ 2.45
CPM-212ENST00000551728 ERCC6Q03468 1493 aa30.23■■■□□ 2.43
CPM-212ENST00000551728 WIZO95785 1651 aa30.17■■■□□ 2.42
CPM-212ENST00000551728 TOP2AP11388 1531 aaKnown RBP30■■■□□ 2.39
CPM-212ENST00000551728 TRIM41Q8WV44 630 aa29.85■■■□□ 2.37
CPM-212ENST00000551728 NESP48681 1621 aa29.78■■■□□ 2.36
CPM-212ENST00000551728 CADPSQ9ULU8 1353 aa29.77■■■□□ 2.36
CPM-212ENST00000551728 SUPT5HO00267 1087 aaKnown RBP29.74■■■□□ 2.35
CPM-212ENST00000551728 LAMC3Q9Y6N6 1575 aa29.71■■■□□ 2.35
CPM-212ENST00000551728 CCDC88BA6NC98 1476 aa29.68■■■□□ 2.34
CPM-212ENST00000551728 PDS5BQ9NTI5 1447 aa29.6■■■□□ 2.33
CPM-212ENST00000551728 CFTRP13569 1480 aa29.6■■■□□ 2.33
CPM-212ENST00000551728 THOC2Q8NI27 1593 aaKnown RBP29.57■■■□□ 2.32
CPM-212ENST00000551728 FANCD2Q9BXW9 1451 aa29.31■■■□□ 2.28
CPM-212ENST00000551728 CEP164Q9UPV0 1460 aa29.25■■■□□ 2.27
CPM-212ENST00000551728 KIF21AQ7Z4S6 1674 aa29.25■■■□□ 2.27
CPM-212ENST00000551728 MRC2Q9UBG0 1479 aa29.17■■■□□ 2.26
CPM-212ENST00000551728 PRDM2Q13029 1718 aa29.15■■■□□ 2.26
CPM-212ENST00000551728 ABCC8Q09428 1581 aa29.05■■■□□ 2.24
CPM-212ENST00000551728 WDR62O43379 1518 aa29.04■■■□□ 2.24
CPM-212ENST00000551728 OSCARQ8IYS5 282 aa28.97■■■□□ 2.23
CPM-212ENST00000551728 URB2Q14146 1524 aaKnown RBP28.95■■■□□ 2.23
CPM-212ENST00000551728 TOPBP1Q92547 1522 aa28.85■■■□□ 2.21
CPM-212ENST00000551728 DNMBPQ6XZF7 1577 aa28.83■■■□□ 2.21
CPM-212ENST00000551728 IFT140Q96RY7 1462 aa28.7■■■□□ 2.18
CPM-212ENST00000551728 CUX1P39880 1505 aa28.67■■■□□ 2.18
CPM-212ENST00000551728 WRNQ14191 1432 aaPredicted RBP eCLIP28.67■■■□□ 2.18
CPM-212ENST00000551728 RIMBP3CA6NJZ7 1639 aa28.63■■■□□ 2.17
CPM-212ENST00000551728 RIMBP3BA6NNM3 1639 aa28.63■■■□□ 2.17
CPM-212ENST00000551728 RIMBP3Q9UFD9 1639 aa28.63■■■□□ 2.17
CPM-212ENST00000551728 POLA1P09884 1462 aaPredicted RBP28.62■■■□□ 2.17
CPM-212ENST00000551728 SOGA1O94964 1423 aa28.6■■■□□ 2.17
CPM-212ENST00000551728 FGD5Q6ZNL6 1462 aa28.56■■■□□ 2.16
CPM-212ENST00000551728 TOP2BQ02880 1626 aa28.52■■■□□ 2.16
CPM-212ENST00000551728 TARBP1Q13395 1621 aaKnown RBP28.48■■■□□ 2.15
CPM-212ENST00000551728 BIVM-ERCC5R4GMW8 1640 aa28.47■■■□□ 2.15
CPM-212ENST00000551728 ARHGEF11O15085 1522 aa28.47■■■□□ 2.15
CPM-212ENST00000551728 RAD54L2Q9Y4B4 1467 aa28.44■■■□□ 2.14
CPM-212ENST00000551728 SYNJ1O43426 1573 aa28.42■■■□□ 2.14
CPM-212ENST00000551728 WDR97A6NE52 1622 aa28.41■■■□□ 2.14
CPM-212ENST00000551728 ZNF608Q9ULD9 1512 aaPredicted RBP28.4■■■□□ 2.14
CPM-212ENST00000551728 CYB5RLQ6IPT4 315 aa28.4■■■□□ 2.14
CPM-212ENST00000551728 TRHP20396 242 aaPredicted RBP28.39■■■□□ 2.14
CPM-212ENST00000551728 ABCA10Q8WWZ4 1543 aa28.38■■■□□ 2.13
CPM-212ENST00000551728 TDRD9Q8NDG6 1382 aaKnown RBP28.33■■■□□ 2.13
CPM-212ENST00000551728 AQRO60306 1485 aaKnown RBP eCLIP28.33■■■□□ 2.13
CPM-212ENST00000551728 EIF4G3O43432 1585 aaKnown RBP28.24■■■□□ 2.11
CPM-212ENST00000551728 GAPVD1Q14C86 1478 aa28.23■■■□□ 2.11
CPM-212ENST00000551728 GRIN2BQ13224 1484 aa28.22■■■□□ 2.11
CPM-212ENST00000551728 AEBP2Q6ZN18 517 aaPredicted RBP28.21■■■□□ 2.11
CPM-212ENST00000551728 ARAP1Q96P48 1450 aa28.15■■■□□ 2.1
CPM-212ENST00000551728 ABCA5Q8WWZ7 1642 aa28.13■■■□□ 2.09
CPM-212ENST00000551728 MAGI1Q96QZ7 1491 aaPredicted RBP28.13■■■□□ 2.09
CPM-212ENST00000551728 KIF27Q86VH2 1401 aa28.11■■■□□ 2.09
CPM-212ENST00000551728 ERICH3Q5RHP9 1530 aa28.06■■■□□ 2.08
CPM-212ENST00000551728 SNAPC4Q5SXM2 1469 aa28.03■■■□□ 2.08
CPM-212ENST00000551728 CHMP7Q8WUX9 453 aaPredicted RBP28.02■■■□□ 2.08
CPM-212ENST00000551728 SYNJ2O15056 1496 aa28■■■□□ 2.07
CPM-212ENST00000551728 CHIC1Q5VXU3 224 aa27.99■■■□□ 2.07
CPM-212ENST00000551728 IGF1RP08069 1367 aa27.99■■■□□ 2.07
CPM-212ENST00000551728 FBLN2P98095 1184 aa27.97■■■□□ 2.07
CPM-212ENST00000551728 FHAD1B1AJZ9 1412 aa27.96■■■□□ 2.07
CPM-212ENST00000551728 PBRM1Q86U86 1689 aa27.94■■■□□ 2.06
CPM-212ENST00000551728 CHD1O14646 1710 aa27.93■■■□□ 2.06
CPM-212ENST00000551728 ADAMTS12P58397 1594 aa27.82■■■□□ 2.04
CPM-212ENST00000551728 CARMIL1Q5VZK9 1371 aa27.81■■■□□ 2.04
CPM-212ENST00000551728 GRIN2AQ12879 1464 aa27.81■■■□□ 2.04
CPM-212ENST00000551728 EEA1Q15075 1411 aa27.8■■■□□ 2.04
CPM-212ENST00000551728 CUL7Q14999 1698 aa27.76■■■□□ 2.03
CPM-212ENST00000551728 RUSC2Q8N2Y8 1516 aa27.74■■■□□ 2.03
CPM-212ENST00000551728 NUP160Q12769 1436 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms