RNA–Protein interactions for RNA: ENST00000551725.1

CSRP2-206, Transcript of cysteine and glycine rich protein 2, humanhuman

TSL 2

Gene CSRP2, Length 194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP2-206ENST00000551725 NISCHQ9Y2I1 1504 aa28.96■■■□□ 2.23
CSRP2-206ENST00000551725 ABCC9O60706 1549 aa25.9■■□□□ 1.74
CSRP2-206ENST00000551725 CCDC180Q9P1Z9 1646 aa25.79■■□□□ 1.72
CSRP2-206ENST00000551725 RB1CC1Q8TDY2 1594 aa24.57■■□□□ 1.52
CSRP2-206ENST00000551725 DCAF8L2P0C7V8 631 aa24.47■■□□□ 1.51
CSRP2-206ENST00000551725 NACADO15069 1562 aa24.46■■□□□ 1.51
CSRP2-206ENST00000551725 DNAJC5BQ9UF47 199 aa24.44■■□□□ 1.5
CSRP2-206ENST00000551725 PABPN1Q86U42 306 aaKnown RBP eCLIP24.22■■□□□ 1.47
CSRP2-206ENST00000551725 MYO15BQ96JP2 1530 aa24.18■■□□□ 1.46
CSRP2-206ENST00000551725 ZCCHC6Q5VYS8 1495 aaKnown RBP24■■□□□ 1.43
CSRP2-206ENST00000551725 UNC13AQ9UPW8 1703 aa23.96■■□□□ 1.43
CSRP2-206ENST00000551725 BICRAQ9NZM4 1560 aa23.96■■□□□ 1.43
CSRP2-206ENST00000551725 DCAF1Q9Y4B6 1507 aa23.89■■□□□ 1.41
CSRP2-206ENST00000551725 SCRIBQ14160 1630 aa23.58■■□□□ 1.36
CSRP2-206ENST00000551725 SHROOM4Q9ULL8 1493 aa23.53■■□□□ 1.36
CSRP2-206ENST00000551725 CC2D2AQ9P2K1 1620 aa23.34■■□□□ 1.33
CSRP2-206ENST00000551725 EIF4G1Q04637 1599 aaKnown RBP23.31■■□□□ 1.32
CSRP2-206ENST00000551725 CECR2Q9BXF3 1484 aa23.31■■□□□ 1.32
CSRP2-206ENST00000551725 NCAPD3P42695 1498 aa22.68■■□□□ 1.22
CSRP2-206ENST00000551725 ATAD2BQ9ULI0 1458 aa22.6■■□□□ 1.21
CSRP2-206ENST00000551725 SMARCA4P51532 1647 aa22.5■■□□□ 1.19
CSRP2-206ENST00000551725 SMARCA2P51531 1590 aa22.44■■□□□ 1.18
CSRP2-206ENST00000551725 BAZ1AQ9NRL2 1556 aaPredicted RBP22.4■■□□□ 1.18
CSRP2-206ENST00000551725 HMGXB3Q12766 1538 aa22.4■■□□□ 1.18
CSRP2-206ENST00000551725 MROH2BQ7Z745 1585 aa22.35■■□□□ 1.17
CSRP2-206ENST00000551725 PEG3Q9GZU2 1588 aa22.31■■□□□ 1.16
CSRP2-206ENST00000551725 BAZ1BQ9UIG0 1483 aaKnown RBP22.31■■□□□ 1.16
CSRP2-206ENST00000551725 DNAJC5Q9H3Z4 198 aa22.3■■□□□ 1.16
CSRP2-206ENST00000551725 NESP48681 1621 aa22.3■■□□□ 1.16
CSRP2-206ENST00000551725 ERCC6Q03468 1493 aa22.28■■□□□ 1.16
CSRP2-206ENST00000551725 CUX2O14529 1486 aa22.22■■□□□ 1.15
CSRP2-206ENST00000551725 LAMC3Q9Y6N6 1575 aa22.03■■□□□ 1.12
CSRP2-206ENST00000551725 WIZO95785 1651 aa22.01■■□□□ 1.11
CSRP2-206ENST00000551725 CADPSQ9ULU8 1353 aa21.99■■□□□ 1.11
CSRP2-206ENST00000551725 PDS5BQ9NTI5 1447 aa21.96■■□□□ 1.11
CSRP2-206ENST00000551725 THOC2Q8NI27 1593 aaKnown RBP21.95■■□□□ 1.1
CSRP2-206ENST00000551725 RSF1Q96T23 1441 aaPredicted RBP21.94■■□□□ 1.1
CSRP2-206ENST00000551725 KIF21AQ7Z4S6 1674 aa21.85■■□□□ 1.09
CSRP2-206ENST00000551725 MRC2Q9UBG0 1479 aa21.76■■□□□ 1.07
CSRP2-206ENST00000551725 CFTRP13569 1480 aa21.74■■□□□ 1.07
CSRP2-206ENST00000551725 TOP2AP11388 1531 aaKnown RBP21.72■■□□□ 1.07
CSRP2-206ENST00000551725 FANCD2Q9BXW9 1451 aa21.7■■□□□ 1.06
CSRP2-206ENST00000551725 WDR62O43379 1518 aa21.69■■□□□ 1.06
CSRP2-206ENST00000551725 CEP164Q9UPV0 1460 aa21.66■■□□□ 1.06
CSRP2-206ENST00000551725 CCDC88BA6NC98 1476 aa21.57■■□□□ 1.04
CSRP2-206ENST00000551725 URB2Q14146 1524 aaKnown RBP21.55■■□□□ 1.04
CSRP2-206ENST00000551725 OSCARQ8IYS5 282 aa21.33■■□□□ 1.01
CSRP2-206ENST00000551725 TOPBP1Q92547 1522 aa21.29■■□□□ 1
CSRP2-206ENST00000551725 ZNF608Q9ULD9 1512 aaPredicted RBP21.29■■□□□ 1
CSRP2-206ENST00000551725 TRIM41Q8WV44 630 aa21.28■■□□□ 1
CSRP2-206ENST00000551725 PRDM2Q13029 1718 aa21.26■□□□□ 0.99
CSRP2-206ENST00000551725 IFT140Q96RY7 1462 aa21.26■□□□□ 0.99
CSRP2-206ENST00000551725 ABCC8Q09428 1581 aa21.19■□□□□ 0.98
CSRP2-206ENST00000551725 DNMBPQ6XZF7 1577 aa21.15■□□□□ 0.98
CSRP2-206ENST00000551725 AQRO60306 1485 aaKnown RBP eCLIP21.11■□□□□ 0.97
CSRP2-206ENST00000551725 POLA1P09884 1462 aaPredicted RBP21.09■□□□□ 0.97
CSRP2-206ENST00000551725 TARBP1Q13395 1621 aaKnown RBP21.07■□□□□ 0.96
CSRP2-206ENST00000551725 RAD54L2Q9Y4B4 1467 aa21.05■□□□□ 0.96
CSRP2-206ENST00000551725 EIF4G3O43432 1585 aaKnown RBP21.04■□□□□ 0.96
CSRP2-206ENST00000551725 SUPT5HO00267 1087 aaKnown RBP21.02■□□□□ 0.96
CSRP2-206ENST00000551725 SOGA1O94964 1423 aa21.02■□□□□ 0.96
CSRP2-206ENST00000551725 TDRD9Q8NDG6 1382 aaKnown RBP21.01■□□□□ 0.95
CSRP2-206ENST00000551725 CUX1P39880 1505 aa20.97■□□□□ 0.95
CSRP2-206ENST00000551725 FGD5Q6ZNL6 1462 aa20.95■□□□□ 0.94
CSRP2-206ENST00000551725 RIMBP3CA6NJZ7 1639 aa20.93■□□□□ 0.94
CSRP2-206ENST00000551725 RIMBP3BA6NNM3 1639 aa20.93■□□□□ 0.94
CSRP2-206ENST00000551725 RIMBP3Q9UFD9 1639 aa20.93■□□□□ 0.94
CSRP2-206ENST00000551725 FBLN2P98095 1184 aa20.93■□□□□ 0.94
CSRP2-206ENST00000551725 ARHGEF11O15085 1522 aa20.91■□□□□ 0.94
CSRP2-206ENST00000551725 CYB5RLQ6IPT4 315 aa20.85■□□□□ 0.93
CSRP2-206ENST00000551725 SNAPC4Q5SXM2 1469 aa20.82■□□□□ 0.92
CSRP2-206ENST00000551725 CHD1O14646 1710 aa20.82■□□□□ 0.92
CSRP2-206ENST00000551725 GRIN2BQ13224 1484 aa20.78■□□□□ 0.92
CSRP2-206ENST00000551725 CHMP7Q8WUX9 453 aaPredicted RBP20.78■□□□□ 0.92
CSRP2-206ENST00000551725 WDR97A6NE52 1622 aa20.75■□□□□ 0.91
CSRP2-206ENST00000551725 ARAP1Q96P48 1450 aa20.75■□□□□ 0.91
CSRP2-206ENST00000551725 MAGI1Q96QZ7 1491 aaPredicted RBP20.75■□□□□ 0.91
CSRP2-206ENST00000551725 ABCA10Q8WWZ4 1543 aa20.73■□□□□ 0.91
CSRP2-206ENST00000551725 GAPVD1Q14C86 1478 aa20.72■□□□□ 0.91
CSRP2-206ENST00000551725 SYNJ2O15056 1496 aa20.7■□□□□ 0.9
CSRP2-206ENST00000551725 CLASP1Q7Z460 1538 aa20.69■□□□□ 0.9
CSRP2-206ENST00000551725 WRNQ14191 1432 aaPredicted RBP eCLIP20.65■□□□□ 0.9
CSRP2-206ENST00000551725 ABCA5Q8WWZ7 1642 aa20.63■□□□□ 0.89
CSRP2-206ENST00000551725 SYNJ1O43426 1573 aa20.61■□□□□ 0.89
CSRP2-206ENST00000551725 TOP2BQ02880 1626 aa20.58■□□□□ 0.89
CSRP2-206ENST00000551725 PBRM1Q86U86 1689 aa20.56■□□□□ 0.88
CSRP2-206ENST00000551725 BIVM-ERCC5R4GMW8 1640 aa20.54■□□□□ 0.88
CSRP2-206ENST00000551725 TRHP20396 242 aaPredicted RBP20.52■□□□□ 0.88
CSRP2-206ENST00000551725 GRIN2AQ12879 1464 aa20.51■□□□□ 0.87
CSRP2-206ENST00000551725 NUP160Q12769 1436 aa20.48■□□□□ 0.87
CSRP2-206ENST00000551725 FHAD1B1AJZ9 1412 aa20.47■□□□□ 0.87
CSRP2-206ENST00000551725 ADAMTS12P58397 1594 aa20.46■□□□□ 0.87
CSRP2-206ENST00000551725 CEP170Q5SW79 1584 aa20.43■□□□□ 0.86
CSRP2-206ENST00000551725 ERCC6L2Q5T890 1561 aa20.43■□□□□ 0.86
CSRP2-206ENST00000551725 ERICH3Q5RHP9 1530 aa20.42■□□□□ 0.86
CSRP2-206ENST00000551725 JPH4Q96JJ6 628 aa20.33■□□□□ 0.85
CSRP2-206ENST00000551725 IGF1RP08069 1367 aa20.33■□□□□ 0.84
CSRP2-206ENST00000551725 SHROOM2Q13796 1616 aa20.31■□□□□ 0.84
CSRP2-206ENST00000551725 PRG4Q92954 1404 aaPredicted RBP20.27■□□□□ 0.84
CSRP2-206ENST00000551725 KIF27Q86VH2 1401 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms