RNA–Protein interactions for RNA: ENST00000551711.5

RNF41-209, Transcript of ring finger protein 41, humanhuman

TSL 5

Gene RNF41, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-209ENST00000551711 NISCHQ9Y2I1 1504 aa19.91■□□□□ 0.78
RNF41-209ENST00000551711 ABCC9O60706 1549 aa18.44■□□□□ 0.54
RNF41-209ENST00000551711 CCDC180Q9P1Z9 1646 aa17.87■□□□□ 0.45
RNF41-209ENST00000551711 DNAJC5BQ9UF47 199 aa17.69■□□□□ 0.42
RNF41-209ENST00000551711 RB1CC1Q8TDY2 1594 aa17.24■□□□□ 0.35
RNF41-209ENST00000551711 PABPN1Q86U42 306 aaKnown RBP eCLIP17.22■□□□□ 0.35
RNF41-209ENST00000551711 DCAF8L2P0C7V8 631 aa17.2■□□□□ 0.34
RNF41-209ENST00000551711 NACADO15069 1562 aa17.03■□□□□ 0.32
RNF41-209ENST00000551711 UNC13AQ9UPW8 1703 aa16.83■□□□□ 0.28
RNF41-209ENST00000551711 BICRAQ9NZM4 1560 aa16.81■□□□□ 0.28
RNF41-209ENST00000551711 MYO15BQ96JP2 1530 aa16.62■□□□□ 0.25
RNF41-209ENST00000551711 CECR2Q9BXF3 1484 aa16.6■□□□□ 0.25
RNF41-209ENST00000551711 CC2D2AQ9P2K1 1620 aa16.55■□□□□ 0.24
RNF41-209ENST00000551711 SCRIBQ14160 1630 aa16.44■□□□□ 0.22
RNF41-209ENST00000551711 EIF4G1Q04637 1599 aaKnown RBP16.42■□□□□ 0.22
RNF41-209ENST00000551711 ZCCHC6Q5VYS8 1495 aaKnown RBP16.4■□□□□ 0.22
RNF41-209ENST00000551711 DNAJC5Q9H3Z4 198 aa16.39■□□□□ 0.21
RNF41-209ENST00000551711 SHROOM4Q9ULL8 1493 aa16.38■□□□□ 0.21
RNF41-209ENST00000551711 DCAF1Q9Y4B6 1507 aa16.31■□□□□ 0.2
RNF41-209ENST00000551711 ERCC6Q03468 1493 aa15.91■□□□□ 0.14
RNF41-209ENST00000551711 CUX2O14529 1486 aa15.89■□□□□ 0.13
RNF41-209ENST00000551711 NCAPD3P42695 1498 aa15.78■□□□□ 0.12
RNF41-209ENST00000551711 NESP48681 1621 aa15.76■□□□□ 0.11
RNF41-209ENST00000551711 ATAD2BQ9ULI0 1458 aa15.72■□□□□ 0.11
RNF41-209ENST00000551711 TRIM41Q8WV44 630 aa15.65■□□□□ 0.1
RNF41-209ENST00000551711 SMARCA2P51531 1590 aa15.58■□□□□ 0.09
RNF41-209ENST00000551711 SMARCA4P51532 1647 aa15.57■□□□□ 0.08
RNF41-209ENST00000551711 HMGXB3Q12766 1538 aa15.57■□□□□ 0.08
RNF41-209ENST00000551711 BAZ1BQ9UIG0 1483 aaKnown RBP15.55■□□□□ 0.08
RNF41-209ENST00000551711 THOC2Q8NI27 1593 aaKnown RBP15.52■□□□□ 0.07
RNF41-209ENST00000551711 BAZ1AQ9NRL2 1556 aaPredicted RBP15.43■□□□□ 0.06
RNF41-209ENST00000551711 LAMC3Q9Y6N6 1575 aa15.42■□□□□ 0.06
RNF41-209ENST00000551711 PDS5BQ9NTI5 1447 aa15.42■□□□□ 0.06
RNF41-209ENST00000551711 KIF21AQ7Z4S6 1674 aa15.41■□□□□ 0.06
RNF41-209ENST00000551711 MROH2BQ7Z745 1585 aa15.4■□□□□ 0.06
RNF41-209ENST00000551711 PEG3Q9GZU2 1588 aa15.36■□□□□ 0.05
RNF41-209ENST00000551711 CADPSQ9ULU8 1353 aa15.34■□□□□ 0.05
RNF41-209ENST00000551711 MRC2Q9UBG0 1479 aa15.31■□□□□ 0.04
RNF41-209ENST00000551711 OSCARQ8IYS5 282 aa15.24■□□□□ 0.03
RNF41-209ENST00000551711 WDR62O43379 1518 aa15.23■□□□□ 0.03
RNF41-209ENST00000551711 WIZO95785 1651 aa15.17■□□□□ 0.02
RNF41-209ENST00000551711 CEP164Q9UPV0 1460 aa15.17■□□□□ 0.02
RNF41-209ENST00000551711 FANCD2Q9BXW9 1451 aa15.16■□□□□ 0.02
RNF41-209ENST00000551711 URB2Q14146 1524 aaKnown RBP15.07■□□□□ 0
RNF41-209ENST00000551711 CFTRP13569 1480 aa15.05■□□□□ -0
RNF41-209ENST00000551711 RIMBP3CA6NJZ7 1639 aa14.99□□□□□ -0.01
RNF41-209ENST00000551711 RIMBP3BA6NNM3 1639 aa14.99□□□□□ -0.01
RNF41-209ENST00000551711 RIMBP3Q9UFD9 1639 aa14.99□□□□□ -0.01
RNF41-209ENST00000551711 CYB5RLQ6IPT4 315 aa14.98□□□□□ -0.01
RNF41-209ENST00000551711 ZNF608Q9ULD9 1512 aaPredicted RBP14.97□□□□□ -0.01
RNF41-209ENST00000551711 RSF1Q96T23 1441 aaPredicted RBP14.96□□□□□ -0.01
RNF41-209ENST00000551711 TRHP20396 242 aaPredicted RBP14.93□□□□□ -0.02
RNF41-209ENST00000551711 ARHGEF11O15085 1522 aa14.92□□□□□ -0.02
RNF41-209ENST00000551711 TOP2AP11388 1531 aaKnown RBP14.9□□□□□ -0.02
RNF41-209ENST00000551711 IFT140Q96RY7 1462 aa14.88□□□□□ -0.03
RNF41-209ENST00000551711 FBLN2P98095 1184 aa14.86□□□□□ -0.03
RNF41-209ENST00000551711 CCDC88BA6NC98 1476 aa14.82□□□□□ -0.04
RNF41-209ENST00000551711 TOPBP1Q92547 1522 aa14.82□□□□□ -0.04
RNF41-209ENST00000551711 AQRO60306 1485 aaKnown RBP eCLIP14.82□□□□□ -0.04
RNF41-209ENST00000551711 ARAP1Q96P48 1450 aa14.78□□□□□ -0.04
RNF41-209ENST00000551711 EIF4G3O43432 1585 aaKnown RBP14.77□□□□□ -0.05
RNF41-209ENST00000551711 CHD1O14646 1710 aa14.72□□□□□ -0.05
RNF41-209ENST00000551711 AEBP2Q6ZN18 517 aaPredicted RBP14.71□□□□□ -0.05
RNF41-209ENST00000551711 PRDM2Q13029 1718 aa14.71□□□□□ -0.05
RNF41-209ENST00000551711 TDRD9Q8NDG6 1382 aaKnown RBP14.7□□□□□ -0.06
RNF41-209ENST00000551711 RAD54L2Q9Y4B4 1467 aa14.69□□□□□ -0.06
RNF41-209ENST00000551711 DNMBPQ6XZF7 1577 aa14.69□□□□□ -0.06
RNF41-209ENST00000551711 ABCC8Q09428 1581 aa14.68□□□□□ -0.06
RNF41-209ENST00000551711 TARBP1Q13395 1621 aaKnown RBP14.67□□□□□ -0.06
RNF41-209ENST00000551711 POLA1P09884 1462 aaPredicted RBP14.65□□□□□ -0.06
RNF41-209ENST00000551711 CHMP7Q8WUX9 453 aaPredicted RBP14.63□□□□□ -0.07
RNF41-209ENST00000551711 SOGA1O94964 1423 aa14.63□□□□□ -0.07
RNF41-209ENST00000551711 SNAPC4Q5SXM2 1469 aa14.6□□□□□ -0.07
RNF41-209ENST00000551711 CLASP1Q7Z460 1538 aa14.55□□□□□ -0.08
RNF41-209ENST00000551711 FGD5Q6ZNL6 1462 aa14.53□□□□□ -0.08
RNF41-209ENST00000551711 SYNJ1O43426 1573 aa14.49□□□□□ -0.09
RNF41-209ENST00000551711 GRIN2BQ13224 1484 aa14.48□□□□□ -0.09
RNF41-209ENST00000551711 GAPVD1Q14C86 1478 aa14.48□□□□□ -0.09
RNF41-209ENST00000551711 MAGI1Q96QZ7 1491 aaPredicted RBP14.47□□□□□ -0.09
RNF41-209ENST00000551711 CUX1P39880 1505 aa14.46□□□□□ -0.09
RNF41-209ENST00000551711 SYNJ2O15056 1496 aa14.46□□□□□ -0.09
RNF41-209ENST00000551711 ERCC6L2Q5T890 1561 aa14.4□□□□□ -0.1
RNF41-209ENST00000551711 WDR97A6NE52 1622 aa14.37□□□□□ -0.11
RNF41-209ENST00000551711 PBRM1Q86U86 1689 aa14.33□□□□□ -0.11
RNF41-209ENST00000551711 GRIN2AQ12879 1464 aa14.3□□□□□ -0.12
RNF41-209ENST00000551711 ABCA10Q8WWZ4 1543 aa14.3□□□□□ -0.12
RNF41-209ENST00000551711 CEP170Q5SW79 1584 aa14.28□□□□□ -0.12
RNF41-209ENST00000551711 ABCA5Q8WWZ7 1642 aa14.27□□□□□ -0.12
RNF41-209ENST00000551711 NUP160Q12769 1436 aa14.24□□□□□ -0.13
RNF41-209ENST00000551711 FAM69CQ0P6D2 419 aa14.23□□□□□ -0.13
RNF41-209ENST00000551711 SUPT5HO00267 1087 aaKnown RBP14.22□□□□□ -0.13
RNF41-209ENST00000551711 PRG4Q92954 1404 aaPredicted RBP14.22□□□□□ -0.13
RNF41-209ENST00000551711 WRNQ14191 1432 aaPredicted RBP eCLIP14.21□□□□□ -0.13
RNF41-209ENST00000551711 ADAMTS12P58397 1594 aa14.21□□□□□ -0.14
RNF41-209ENST00000551711 JPH4Q96JJ6 628 aa14.2□□□□□ -0.14
RNF41-209ENST00000551711 FHAD1B1AJZ9 1412 aa14.19□□□□□ -0.14
RNF41-209ENST00000551711 KDM4FA0A1W2PPD8 638 aa14.17□□□□□ -0.14
RNF41-209ENST00000551711 SHROOM2Q13796 1616 aa14.16□□□□□ -0.14
RNF41-209ENST00000551711 KIF13AQ9H1H9 1805 aa14.16□□□□□ -0.14
RNF41-209ENST00000551711 NPM1P06748 294 aaKnown RBP eCLIP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms