RNA–Protein interactions for RNA: ENST00000551593.5

RPH3A-221, Transcript of rabphilin 3A, humanhuman

TSL 4

Gene RPH3A, Length 740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3A-221ENST00000551593 NISCHQ9Y2I1 1504 aa51.18■■■■■ 5.78
RPH3A-221ENST00000551593 CCDC180Q9P1Z9 1646 aa45.55■■■■■ 4.88
RPH3A-221ENST00000551593 ABCC9O60706 1549 aa45.06■■■■■ 4.8
RPH3A-221ENST00000551593 RB1CC1Q8TDY2 1594 aa43.04■■■■■ 4.48
RPH3A-221ENST00000551593 NACADO15069 1562 aa42.94■■■■■ 4.46
RPH3A-221ENST00000551593 DCAF8L2P0C7V8 631 aa42.79■■■■■ 4.44
RPH3A-221ENST00000551593 MYO15BQ96JP2 1530 aa42.6■■■■■ 4.41
RPH3A-221ENST00000551593 ZCCHC6Q5VYS8 1495 aaKnown RBP42.58■■■■■ 4.41
RPH3A-221ENST00000551593 DCAF1Q9Y4B6 1507 aa42.29■■■■■ 4.36
RPH3A-221ENST00000551593 UNC13AQ9UPW8 1703 aa42.17■■■■■ 4.34
RPH3A-221ENST00000551593 PABPN1Q86U42 306 aaKnown RBP eCLIP42.09■■■■■ 4.33
RPH3A-221ENST00000551593 BICRAQ9NZM4 1560 aa41.97■■■■■ 4.31
RPH3A-221ENST00000551593 DNAJC5BQ9UF47 199 aa41.91■■■■■ 4.3
RPH3A-221ENST00000551593 SCRIBQ14160 1630 aa41.61■■■■■ 4.25
RPH3A-221ENST00000551593 SHROOM4Q9ULL8 1493 aa41.28■■■■■ 4.2
RPH3A-221ENST00000551593 EIF4G1Q04637 1599 aaKnown RBP40.79■■■■■ 4.12
RPH3A-221ENST00000551593 CC2D2AQ9P2K1 1620 aa40.71■■■■■ 4.11
RPH3A-221ENST00000551593 CECR2Q9BXF3 1484 aa40.49■■■■■ 4.07
RPH3A-221ENST00000551593 SMARCA4P51532 1647 aa39.77■■■■□ 3.96
RPH3A-221ENST00000551593 NCAPD3P42695 1498 aa39.72■■■■□ 3.95
RPH3A-221ENST00000551593 ATAD2BQ9ULI0 1458 aa39.7■■■■□ 3.95
RPH3A-221ENST00000551593 BAZ1AQ9NRL2 1556 aaPredicted RBP39.6■■■■□ 3.93
RPH3A-221ENST00000551593 MROH2BQ7Z745 1585 aa39.51■■■■□ 3.92
RPH3A-221ENST00000551593 SMARCA2P51531 1590 aa39.5■■■■□ 3.91
RPH3A-221ENST00000551593 HMGXB3Q12766 1538 aa39.42■■■■□ 3.9
RPH3A-221ENST00000551593 PEG3Q9GZU2 1588 aa39.41■■■■□ 3.9
RPH3A-221ENST00000551593 BAZ1BQ9UIG0 1483 aaKnown RBP39.24■■■■□ 3.87
RPH3A-221ENST00000551593 WIZO95785 1651 aa39.01■■■■□ 3.84
RPH3A-221ENST00000551593 NESP48681 1621 aa38.96■■■■□ 3.83
RPH3A-221ENST00000551593 RSF1Q96T23 1441 aaPredicted RBP38.91■■■■□ 3.82
RPH3A-221ENST00000551593 ERCC6Q03468 1493 aa38.71■■■■□ 3.79
RPH3A-221ENST00000551593 LAMC3Q9Y6N6 1575 aa38.62■■■■□ 3.77
RPH3A-221ENST00000551593 TOP2AP11388 1531 aaKnown RBP38.53■■■■□ 3.76
RPH3A-221ENST00000551593 CADPSQ9ULU8 1353 aa38.52■■■■□ 3.76
RPH3A-221ENST00000551593 CUX2O14529 1486 aa38.49■■■■□ 3.75
RPH3A-221ENST00000551593 THOC2Q8NI27 1593 aaKnown RBP38.39■■■■□ 3.74
RPH3A-221ENST00000551593 KIF21AQ7Z4S6 1674 aa38.36■■■■□ 3.73
RPH3A-221ENST00000551593 PDS5BQ9NTI5 1447 aa38.35■■■■□ 3.73
RPH3A-221ENST00000551593 CFTRP13569 1480 aa38.23■■■■□ 3.71
RPH3A-221ENST00000551593 CCDC88BA6NC98 1476 aa38.14■■■■□ 3.7
RPH3A-221ENST00000551593 FANCD2Q9BXW9 1451 aa38.06■■■■□ 3.68
RPH3A-221ENST00000551593 MRC2Q9UBG0 1479 aa38.05■■■■□ 3.68
RPH3A-221ENST00000551593 WDR62O43379 1518 aa37.98■■■■□ 3.67
RPH3A-221ENST00000551593 CEP164Q9UPV0 1460 aa37.98■■■■□ 3.67
RPH3A-221ENST00000551593 DNAJC5Q9H3Z4 198 aa37.86■■■■□ 3.65
RPH3A-221ENST00000551593 URB2Q14146 1524 aaKnown RBP37.79■■■■□ 3.64
RPH3A-221ENST00000551593 PRDM2Q13029 1718 aa37.75■■■■□ 3.63
RPH3A-221ENST00000551593 SUPT5HO00267 1087 aaKnown RBP37.52■■■■□ 3.6
RPH3A-221ENST00000551593 TOPBP1Q92547 1522 aa37.44■■■■□ 3.58
RPH3A-221ENST00000551593 DNMBPQ6XZF7 1577 aa37.3■■■■□ 3.56
RPH3A-221ENST00000551593 ABCC8Q09428 1581 aa37.25■■■■□ 3.55
RPH3A-221ENST00000551593 ZNF608Q9ULD9 1512 aaPredicted RBP37.24■■■■□ 3.55
RPH3A-221ENST00000551593 IFT140Q96RY7 1462 aa37.23■■■■□ 3.55
RPH3A-221ENST00000551593 POLA1P09884 1462 aaPredicted RBP37.11■■■■□ 3.53
RPH3A-221ENST00000551593 TARBP1Q13395 1621 aaKnown RBP37.08■■■■□ 3.53
RPH3A-221ENST00000551593 CUX1P39880 1505 aa37.06■■■■□ 3.52
RPH3A-221ENST00000551593 RAD54L2Q9Y4B4 1467 aa37■■■■□ 3.51
RPH3A-221ENST00000551593 EIF4G3O43432 1585 aaKnown RBP36.96■■■■□ 3.51
RPH3A-221ENST00000551593 FGD5Q6ZNL6 1462 aa36.94■■■■□ 3.5
RPH3A-221ENST00000551593 AQRO60306 1485 aaKnown RBP eCLIP36.94■■■■□ 3.5
RPH3A-221ENST00000551593 SOGA1O94964 1423 aa36.89■■■■□ 3.5
RPH3A-221ENST00000551593 OSCARQ8IYS5 282 aa36.82■■■■□ 3.48
RPH3A-221ENST00000551593 TDRD9Q8NDG6 1382 aaKnown RBP36.79■■■■□ 3.48
RPH3A-221ENST00000551593 WDR97A6NE52 1622 aa36.66■■■■□ 3.46
RPH3A-221ENST00000551593 SYNJ1O43426 1573 aa36.61■■■■□ 3.45
RPH3A-221ENST00000551593 WRNQ14191 1432 aaPredicted RBP eCLIP36.59■■■■□ 3.45
RPH3A-221ENST00000551593 ABCA10Q8WWZ4 1543 aa36.56■■■■□ 3.44
RPH3A-221ENST00000551593 TOP2BQ02880 1626 aa36.56■■■■□ 3.44
RPH3A-221ENST00000551593 BIVM-ERCC5R4GMW8 1640 aa36.56■■■■□ 3.44
RPH3A-221ENST00000551593 CHD1O14646 1710 aa36.54■■■■□ 3.44
RPH3A-221ENST00000551593 SNAPC4Q5SXM2 1469 aa36.54■■■■□ 3.44
RPH3A-221ENST00000551593 GRIN2BQ13224 1484 aa36.48■■■■□ 3.43
RPH3A-221ENST00000551593 ABCA5Q8WWZ7 1642 aa36.45■■■■□ 3.43
RPH3A-221ENST00000551593 GAPVD1Q14C86 1478 aa36.45■■■■□ 3.43
RPH3A-221ENST00000551593 MAGI1Q96QZ7 1491 aaPredicted RBP36.42■■■■□ 3.42
RPH3A-221ENST00000551593 FBLN2P98095 1184 aa36.41■■■■□ 3.42
RPH3A-221ENST00000551593 TRIM41Q8WV44 630 aa36.36■■■■□ 3.41
RPH3A-221ENST00000551593 PBRM1Q86U86 1689 aa36.35■■■■□ 3.41
RPH3A-221ENST00000551593 RIMBP3CA6NJZ7 1639 aa36.34■■■■□ 3.41
RPH3A-221ENST00000551593 RIMBP3BA6NNM3 1639 aa36.34■■■■□ 3.41
RPH3A-221ENST00000551593 RIMBP3Q9UFD9 1639 aa36.34■■■■□ 3.41
RPH3A-221ENST00000551593 ARHGEF11O15085 1522 aa36.31■■■■□ 3.4
RPH3A-221ENST00000551593 SYNJ2O15056 1496 aa36.31■■■■□ 3.4
RPH3A-221ENST00000551593 CHMP7Q8WUX9 453 aaPredicted RBP36.26■■■■□ 3.4
RPH3A-221ENST00000551593 CLASP1Q7Z460 1538 aa36.23■■■■□ 3.39
RPH3A-221ENST00000551593 ADAMTS12P58397 1594 aa36.12■■■■□ 3.37
RPH3A-221ENST00000551593 GRIN2AQ12879 1464 aa36.05■■■■□ 3.36
RPH3A-221ENST00000551593 ERICH3Q5RHP9 1530 aa36.05■■■■□ 3.36
RPH3A-221ENST00000551593 ARAP1Q96P48 1450 aa36.05■■■■□ 3.36
RPH3A-221ENST00000551593 FHAD1B1AJZ9 1412 aa36.01■■■■□ 3.36
RPH3A-221ENST00000551593 CYB5RLQ6IPT4 315 aa35.96■■■■□ 3.35
RPH3A-221ENST00000551593 NUP160Q12769 1436 aa35.96■■■■□ 3.35
RPH3A-221ENST00000551593 CEP170Q5SW79 1584 aa35.94■■■■□ 3.34
RPH3A-221ENST00000551593 IGF1RP08069 1367 aa35.85■■■■□ 3.33
RPH3A-221ENST00000551593 KIF27Q86VH2 1401 aa35.81■■■■□ 3.32
RPH3A-221ENST00000551593 ERCC6L2Q5T890 1561 aa35.79■■■■□ 3.32
RPH3A-221ENST00000551593 SHROOM2Q13796 1616 aa35.71■■■■□ 3.31
RPH3A-221ENST00000551593 RUSC2Q8N2Y8 1516 aa35.6■■■■□ 3.29
RPH3A-221ENST00000551593 CUL7Q14999 1698 aa35.59■■■■□ 3.29
RPH3A-221ENST00000551593 CARMIL1Q5VZK9 1371 aa35.54■■■■□ 3.28
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms