RNA–Protein interactions for RNA: ENST00000551557.1

TGIF1-220, Transcript of TGFB induced factor homeobox 1, humanhuman

TSL 3

Gene TGIF1, Length 319 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGIF1-220ENST00000551557 NISCHQ9Y2I1 1504 aa48.88■■■■■ 5.41
TGIF1-220ENST00000551557 CCDC180Q9P1Z9 1646 aa43.64■■■■■ 4.58
TGIF1-220ENST00000551557 ABCC9O60706 1549 aa42.98■■■■■ 4.47
TGIF1-220ENST00000551557 RB1CC1Q8TDY2 1594 aa41.19■■■■■ 4.18
TGIF1-220ENST00000551557 NACADO15069 1562 aa41.04■■■■■ 4.16
TGIF1-220ENST00000551557 DCAF8L2P0C7V8 631 aa40.93■■■■■ 4.14
TGIF1-220ENST00000551557 ZCCHC6Q5VYS8 1495 aaKnown RBP40.65■■■■■ 4.1
TGIF1-220ENST00000551557 MYO15BQ96JP2 1530 aa40.65■■■■■ 4.1
TGIF1-220ENST00000551557 UNC13AQ9UPW8 1703 aa40.45■■■■■ 4.07
TGIF1-220ENST00000551557 DCAF1Q9Y4B6 1507 aa40.38■■■■■ 4.06
TGIF1-220ENST00000551557 PABPN1Q86U42 306 aaKnown RBP eCLIP40.09■■■■■ 4.01
TGIF1-220ENST00000551557 BICRAQ9NZM4 1560 aa40.02■■■■■ 4
TGIF1-220ENST00000551557 SCRIBQ14160 1630 aa39.83■■■■□ 3.97
TGIF1-220ENST00000551557 DNAJC5BQ9UF47 199 aa39.75■■■■□ 3.95
TGIF1-220ENST00000551557 SHROOM4Q9ULL8 1493 aa39.43■■■■□ 3.9
TGIF1-220ENST00000551557 EIF4G1Q04637 1599 aaKnown RBP38.95■■■■□ 3.83
TGIF1-220ENST00000551557 CC2D2AQ9P2K1 1620 aa38.9■■■■□ 3.82
TGIF1-220ENST00000551557 CECR2Q9BXF3 1484 aa38.62■■■■□ 3.77
TGIF1-220ENST00000551557 SMARCA4P51532 1647 aa38.04■■■■□ 3.68
TGIF1-220ENST00000551557 BAZ1AQ9NRL2 1556 aaPredicted RBP37.89■■■■□ 3.66
TGIF1-220ENST00000551557 NCAPD3P42695 1498 aa37.85■■■■□ 3.65
TGIF1-220ENST00000551557 ATAD2BQ9ULI0 1458 aa37.85■■■■□ 3.65
TGIF1-220ENST00000551557 SMARCA2P51531 1590 aa37.79■■■■□ 3.64
TGIF1-220ENST00000551557 MROH2BQ7Z745 1585 aa37.7■■■■□ 3.63
TGIF1-220ENST00000551557 HMGXB3Q12766 1538 aa37.67■■■■□ 3.62
TGIF1-220ENST00000551557 PEG3Q9GZU2 1588 aa37.63■■■■□ 3.62
TGIF1-220ENST00000551557 BAZ1BQ9UIG0 1483 aaKnown RBP37.52■■■■□ 3.6
TGIF1-220ENST00000551557 WIZO95785 1651 aa37.34■■■■□ 3.57
TGIF1-220ENST00000551557 NESP48681 1621 aa37.14■■■■□ 3.54
TGIF1-220ENST00000551557 RSF1Q96T23 1441 aaPredicted RBP37.1■■■■□ 3.53
TGIF1-220ENST00000551557 ERCC6Q03468 1493 aa37.03■■■■□ 3.52
TGIF1-220ENST00000551557 LAMC3Q9Y6N6 1575 aa36.95■■■■□ 3.51
TGIF1-220ENST00000551557 TOP2AP11388 1531 aaKnown RBP36.84■■■■□ 3.49
TGIF1-220ENST00000551557 KIF21AQ7Z4S6 1674 aa36.77■■■■□ 3.48
TGIF1-220ENST00000551557 CUX2O14529 1486 aa36.74■■■■□ 3.47
TGIF1-220ENST00000551557 CADPSQ9ULU8 1353 aa36.72■■■■□ 3.47
TGIF1-220ENST00000551557 THOC2Q8NI27 1593 aaKnown RBP36.66■■■■□ 3.46
TGIF1-220ENST00000551557 PDS5BQ9NTI5 1447 aa36.64■■■■□ 3.46
TGIF1-220ENST00000551557 CFTRP13569 1480 aa36.46■■■■□ 3.43
TGIF1-220ENST00000551557 CCDC88BA6NC98 1476 aa36.4■■■■□ 3.42
TGIF1-220ENST00000551557 FANCD2Q9BXW9 1451 aa36.34■■■■□ 3.41
TGIF1-220ENST00000551557 MRC2Q9UBG0 1479 aa36.34■■■■□ 3.41
TGIF1-220ENST00000551557 PRDM2Q13029 1718 aa36.34■■■■□ 3.41
TGIF1-220ENST00000551557 CEP164Q9UPV0 1460 aa36.32■■■■□ 3.41
TGIF1-220ENST00000551557 WDR62O43379 1518 aa36.25■■■■□ 3.39
TGIF1-220ENST00000551557 URB2Q14146 1524 aaKnown RBP36.03■■■■□ 3.36
TGIF1-220ENST00000551557 DNAJC5Q9H3Z4 198 aa35.97■■■■□ 3.35
TGIF1-220ENST00000551557 SUPT5HO00267 1087 aaKnown RBP35.92■■■■□ 3.34
TGIF1-220ENST00000551557 TOPBP1Q92547 1522 aa35.74■■■■□ 3.31
TGIF1-220ENST00000551557 DNMBPQ6XZF7 1577 aa35.68■■■■□ 3.3
TGIF1-220ENST00000551557 ABCC8Q09428 1581 aa35.64■■■■□ 3.3
TGIF1-220ENST00000551557 IFT140Q96RY7 1462 aa35.55■■■■□ 3.28
TGIF1-220ENST00000551557 ZNF608Q9ULD9 1512 aaPredicted RBP35.49■■■■□ 3.27
TGIF1-220ENST00000551557 TARBP1Q13395 1621 aaKnown RBP35.43■■■■□ 3.26
TGIF1-220ENST00000551557 POLA1P09884 1462 aaPredicted RBP35.41■■■■□ 3.26
TGIF1-220ENST00000551557 CUX1P39880 1505 aa35.39■■■■□ 3.26
TGIF1-220ENST00000551557 EIF4G3O43432 1585 aaKnown RBP35.36■■■■□ 3.25
TGIF1-220ENST00000551557 FGD5Q6ZNL6 1462 aa35.29■■■■□ 3.24
TGIF1-220ENST00000551557 RAD54L2Q9Y4B4 1467 aa35.29■■■■□ 3.24
TGIF1-220ENST00000551557 SOGA1O94964 1423 aa35.23■■■■□ 3.23
TGIF1-220ENST00000551557 AQRO60306 1485 aaKnown RBP eCLIP35.22■■■■□ 3.23
TGIF1-220ENST00000551557 OSCARQ8IYS5 282 aa35.12■■■■□ 3.21
TGIF1-220ENST00000551557 WDR97A6NE52 1622 aa35.1■■■■□ 3.21
TGIF1-220ENST00000551557 TDRD9Q8NDG6 1382 aaKnown RBP35.09■■■■□ 3.21
TGIF1-220ENST00000551557 CHD1O14646 1710 aa35.05■■■■□ 3.2
TGIF1-220ENST00000551557 BIVM-ERCC5R4GMW8 1640 aa35.03■■■■□ 3.2
TGIF1-220ENST00000551557 SYNJ1O43426 1573 aa35■■■■□ 3.19
TGIF1-220ENST00000551557 TOP2BQ02880 1626 aa34.99■■■■□ 3.19
TGIF1-220ENST00000551557 WRNQ14191 1432 aaPredicted RBP eCLIP34.98■■■■□ 3.19
TGIF1-220ENST00000551557 PBRM1Q86U86 1689 aa34.91■■■■□ 3.18
TGIF1-220ENST00000551557 ABCA10Q8WWZ4 1543 aa34.91■■■■□ 3.18
TGIF1-220ENST00000551557 SNAPC4Q5SXM2 1469 aa34.9■■■■□ 3.18
TGIF1-220ENST00000551557 ABCA5Q8WWZ7 1642 aa34.87■■■■□ 3.17
TGIF1-220ENST00000551557 GRIN2BQ13224 1484 aa34.85■■■■□ 3.17
TGIF1-220ENST00000551557 GAPVD1Q14C86 1478 aa34.84■■■■□ 3.17
TGIF1-220ENST00000551557 FBLN2P98095 1184 aa34.82■■■■□ 3.16
TGIF1-220ENST00000551557 MAGI1Q96QZ7 1491 aaPredicted RBP34.79■■■■□ 3.16
TGIF1-220ENST00000551557 RIMBP3CA6NJZ7 1639 aa34.74■■■■□ 3.15
TGIF1-220ENST00000551557 RIMBP3BA6NNM3 1639 aa34.74■■■■□ 3.15
TGIF1-220ENST00000551557 RIMBP3Q9UFD9 1639 aa34.74■■■■□ 3.15
TGIF1-220ENST00000551557 TRIM41Q8WV44 630 aa34.69■■■■□ 3.14
TGIF1-220ENST00000551557 SYNJ2O15056 1496 aa34.67■■■■□ 3.14
TGIF1-220ENST00000551557 ARHGEF11O15085 1522 aa34.65■■■■□ 3.14
TGIF1-220ENST00000551557 CHMP7Q8WUX9 453 aaPredicted RBP34.64■■■■□ 3.14
TGIF1-220ENST00000551557 CLASP1Q7Z460 1538 aa34.57■■■■□ 3.12
TGIF1-220ENST00000551557 ADAMTS12P58397 1594 aa34.55■■■■□ 3.12
TGIF1-220ENST00000551557 ERICH3Q5RHP9 1530 aa34.49■■■■□ 3.11
TGIF1-220ENST00000551557 GRIN2AQ12879 1464 aa34.43■■■■□ 3.1
TGIF1-220ENST00000551557 FHAD1B1AJZ9 1412 aa34.39■■■■□ 3.1
TGIF1-220ENST00000551557 ARAP1Q96P48 1450 aa34.35■■■■□ 3.09
TGIF1-220ENST00000551557 CEP170Q5SW79 1584 aa34.33■■■■□ 3.09
TGIF1-220ENST00000551557 CYB5RLQ6IPT4 315 aa34.29■■■■□ 3.08
TGIF1-220ENST00000551557 NUP160Q12769 1436 aa34.28■■■■□ 3.08
TGIF1-220ENST00000551557 KIF27Q86VH2 1401 aa34.24■■■■□ 3.07
TGIF1-220ENST00000551557 IGF1RP08069 1367 aa34.16■■■■□ 3.06
TGIF1-220ENST00000551557 CUL7Q14999 1698 aa34.15■■■■□ 3.06
TGIF1-220ENST00000551557 SHROOM2Q13796 1616 aa34.12■■■■□ 3.05
TGIF1-220ENST00000551557 ERCC6L2Q5T890 1561 aa34.12■■■■□ 3.05
TGIF1-220ENST00000551557 RUSC2Q8N2Y8 1516 aa34.05■■■■□ 3.04
TGIF1-220ENST00000551557 CARMIL1Q5VZK9 1371 aa33.95■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms