RNA–Protein interactions for RNA: ENST00000551548.5

PFKM-224, Transcript of phosphofructokinase, muscle, humanhuman

TSL 4

Gene PFKM, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-224ENST00000551548 NISCHQ9Y2I1 1504 aa20.94■□□□□ 0.94
PFKM-224ENST00000551548 CCDC180Q9P1Z9 1646 aa18.64■□□□□ 0.57
PFKM-224ENST00000551548 ABCC9O60706 1549 aa18.15■□□□□ 0.5
PFKM-224ENST00000551548 ZCCHC6Q5VYS8 1495 aaKnown RBP17.49■□□□□ 0.39
PFKM-224ENST00000551548 RB1CC1Q8TDY2 1594 aa17.48■□□□□ 0.39
PFKM-224ENST00000551548 NACADO15069 1562 aa17.46■□□□□ 0.39
PFKM-224ENST00000551548 DCAF8L2P0C7V8 631 aa17.41■□□□□ 0.38
PFKM-224ENST00000551548 MYO15BQ96JP2 1530 aa17.35■□□□□ 0.37
PFKM-224ENST00000551548 DCAF1Q9Y4B6 1507 aa17.31■□□□□ 0.36
PFKM-224ENST00000551548 UNC13AQ9UPW8 1703 aa17.18■□□□□ 0.34
PFKM-224ENST00000551548 SCRIBQ14160 1630 aa17.04■□□□□ 0.32
PFKM-224ENST00000551548 BICRAQ9NZM4 1560 aa16.97■□□□□ 0.31
PFKM-224ENST00000551548 PABPN1Q86U42 306 aaKnown RBP eCLIP16.93■□□□□ 0.3
PFKM-224ENST00000551548 SHROOM4Q9ULL8 1493 aa16.75■□□□□ 0.27
PFKM-224ENST00000551548 DNAJC5BQ9UF47 199 aa16.54■□□□□ 0.24
PFKM-224ENST00000551548 EIF4G1Q04637 1599 aaKnown RBP16.51■□□□□ 0.23
PFKM-224ENST00000551548 CC2D2AQ9P2K1 1620 aa16.44■□□□□ 0.22
PFKM-224ENST00000551548 CECR2Q9BXF3 1484 aa16.33■□□□□ 0.2
PFKM-224ENST00000551548 SMARCA4P51532 1647 aa16.28■□□□□ 0.2
PFKM-224ENST00000551548 BAZ1AQ9NRL2 1556 aaPredicted RBP16.24■□□□□ 0.19
PFKM-224ENST00000551548 MROH2BQ7Z745 1585 aa16.17■□□□□ 0.18
PFKM-224ENST00000551548 ATAD2BQ9ULI0 1458 aa16.13■□□□□ 0.17
PFKM-224ENST00000551548 SMARCA2P51531 1590 aa16.13■□□□□ 0.17
PFKM-224ENST00000551548 PEG3Q9GZU2 1588 aa16.09■□□□□ 0.17
PFKM-224ENST00000551548 NCAPD3P42695 1498 aa16.07■□□□□ 0.16
PFKM-224ENST00000551548 HMGXB3Q12766 1538 aa16.06■□□□□ 0.16
PFKM-224ENST00000551548 WIZO95785 1651 aa16.02■□□□□ 0.16
PFKM-224ENST00000551548 BAZ1BQ9UIG0 1483 aaKnown RBP16.02■□□□□ 0.15
PFKM-224ENST00000551548 RSF1Q96T23 1441 aaPredicted RBP15.97■□□□□ 0.15
PFKM-224ENST00000551548 TOP2AP11388 1531 aaKnown RBP15.84■□□□□ 0.13
PFKM-224ENST00000551548 NESP48681 1621 aa15.74■□□□□ 0.11
PFKM-224ENST00000551548 LAMC3Q9Y6N6 1575 aa15.69■□□□□ 0.1
PFKM-224ENST00000551548 ERCC6Q03468 1493 aa15.63■□□□□ 0.09
PFKM-224ENST00000551548 CCDC88BA6NC98 1476 aa15.61■□□□□ 0.09
PFKM-224ENST00000551548 CADPSQ9ULU8 1353 aa15.61■□□□□ 0.09
PFKM-224ENST00000551548 KIF21AQ7Z4S6 1674 aa15.6■□□□□ 0.09
PFKM-224ENST00000551548 SUPT5HO00267 1087 aaKnown RBP15.6■□□□□ 0.09
PFKM-224ENST00000551548 PRDM2Q13029 1718 aa15.55■□□□□ 0.08
PFKM-224ENST00000551548 CFTRP13569 1480 aa15.55■□□□□ 0.08
PFKM-224ENST00000551548 PDS5BQ9NTI5 1447 aa15.53■□□□□ 0.08
PFKM-224ENST00000551548 THOC2Q8NI27 1593 aaKnown RBP15.52■□□□□ 0.07
PFKM-224ENST00000551548 FANCD2Q9BXW9 1451 aa15.47■□□□□ 0.07
PFKM-224ENST00000551548 CEP164Q9UPV0 1460 aa15.46■□□□□ 0.06
PFKM-224ENST00000551548 CUX2O14529 1486 aa15.42■□□□□ 0.06
PFKM-224ENST00000551548 MRC2Q9UBG0 1479 aa15.42■□□□□ 0.06
PFKM-224ENST00000551548 WDR62O43379 1518 aa15.38■□□□□ 0.05
PFKM-224ENST00000551548 URB2Q14146 1524 aaKnown RBP15.34■□□□□ 0.05
PFKM-224ENST00000551548 TOPBP1Q92547 1522 aa15.25■□□□□ 0.03
PFKM-224ENST00000551548 DNMBPQ6XZF7 1577 aa15.24■□□□□ 0.03
PFKM-224ENST00000551548 ABCC8Q09428 1581 aa15.19■□□□□ 0.02
PFKM-224ENST00000551548 CUX1P39880 1505 aa15.17■□□□□ 0.02
PFKM-224ENST00000551548 POLA1P09884 1462 aaPredicted RBP15.12■□□□□ 0.01
PFKM-224ENST00000551548 IFT140Q96RY7 1462 aa15.11■□□□□ 0.01
PFKM-224ENST00000551548 FGD5Q6ZNL6 1462 aa15.1■□□□□ 0.01
PFKM-224ENST00000551548 TARBP1Q13395 1621 aaKnown RBP15.09■□□□□ 0.01
PFKM-224ENST00000551548 SYNJ1O43426 1573 aa15.08■□□□□ 0
PFKM-224ENST00000551548 BIVM-ERCC5R4GMW8 1640 aa15.07■□□□□ 0
PFKM-224ENST00000551548 WRNQ14191 1432 aaPredicted RBP eCLIP15.07■□□□□ 0
PFKM-224ENST00000551548 ZNF608Q9ULD9 1512 aaPredicted RBP15.07■□□□□ 0
PFKM-224ENST00000551548 RAD54L2Q9Y4B4 1467 aa15.06■□□□□ 0
PFKM-224ENST00000551548 EIF4G3O43432 1585 aaKnown RBP15.05■□□□□ -0
PFKM-224ENST00000551548 TOP2BQ02880 1626 aa15.05■□□□□ -0
PFKM-224ENST00000551548 WDR97A6NE52 1622 aa15.03■□□□□ -0
PFKM-224ENST00000551548 SOGA1O94964 1423 aa15.01□□□□□ -0.01
PFKM-224ENST00000551548 AQRO60306 1485 aaKnown RBP eCLIP14.96□□□□□ -0.011e-6■■■■■ 33.8
PFKM-224ENST00000551548 ABCA10Q8WWZ4 1543 aa14.94□□□□□ -0.02
PFKM-224ENST00000551548 TDRD9Q8NDG6 1382 aaKnown RBP14.93□□□□□ -0.02
PFKM-224ENST00000551548 ABCA5Q8WWZ7 1642 aa14.92□□□□□ -0.02
PFKM-224ENST00000551548 PBRM1Q86U86 1689 aa14.92□□□□□ -0.02
PFKM-224ENST00000551548 CHD1O14646 1710 aa14.87□□□□□ -0.03
PFKM-224ENST00000551548 GAPVD1Q14C86 1478 aa14.87□□□□□ -0.03
PFKM-224ENST00000551548 SNAPC4Q5SXM2 1469 aa14.87□□□□□ -0.03
PFKM-224ENST00000551548 GRIN2BQ13224 1484 aa14.86□□□□□ -0.03
PFKM-224ENST00000551548 MAGI1Q96QZ7 1491 aaPredicted RBP14.82□□□□□ -0.04
PFKM-224ENST00000551548 DNAJC5Q9H3Z4 198 aa14.8□□□□□ -0.04
PFKM-224ENST00000551548 ADAMTS12P58397 1594 aa14.79□□□□□ -0.04
PFKM-224ENST00000551548 ERICH3Q5RHP9 1530 aa14.76□□□□□ -0.05
PFKM-224ENST00000551548 SYNJ2O15056 1496 aa14.75□□□□□ -0.05
PFKM-224ENST00000551548 FBLN2P98095 1184 aa14.74□□□□□ -0.05
PFKM-224ENST00000551548 KIF27Q86VH2 1401 aa14.73□□□□□ -0.05
PFKM-224ENST00000551548 OSCARQ8IYS5 282 aa14.72□□□□□ -0.05
PFKM-224ENST00000551548 FHAD1B1AJZ9 1412 aa14.69□□□□□ -0.06
PFKM-224ENST00000551548 CHMP7Q8WUX9 453 aaPredicted RBP14.69□□□□□ -0.06
PFKM-224ENST00000551548 TRIM41Q8WV44 630 aa14.69□□□□□ -0.06
PFKM-224ENST00000551548 GRIN2AQ12879 1464 aa14.68□□□□□ -0.06
PFKM-224ENST00000551548 CUL7Q14999 1698 aa14.68□□□□□ -0.06
PFKM-224ENST00000551548 CLASP1Q7Z460 1538 aa14.66□□□□□ -0.06
PFKM-224ENST00000551548 RUSC2Q8N2Y8 1516 aa14.66□□□□□ -0.06
PFKM-224ENST00000551548 CEP170Q5SW79 1584 aa14.64□□□□□ -0.07
PFKM-224ENST00000551548 IGF1RP08069 1367 aa14.63□□□□□ -0.07
PFKM-224ENST00000551548 RIMBP3CA6NJZ7 1639 aa14.61□□□□□ -0.07
PFKM-224ENST00000551548 RIMBP3BA6NNM3 1639 aa14.61□□□□□ -0.07
PFKM-224ENST00000551548 RIMBP3Q9UFD9 1639 aa14.61□□□□□ -0.07
PFKM-224ENST00000551548 NUP160Q12769 1436 aa14.6□□□□□ -0.07
PFKM-224ENST00000551548 ARHGEF11O15085 1522 aa14.59□□□□□ -0.07
PFKM-224ENST00000551548 CHIC1Q5VXU3 224 aa14.58□□□□□ -0.08
PFKM-224ENST00000551548 CARMIL1Q5VZK9 1371 aa14.56□□□□□ -0.08
PFKM-224ENST00000551548 SHROOM2Q13796 1616 aa14.52□□□□□ -0.08
PFKM-224ENST00000551548 RAPGEF2Q9Y4G8 1499 aa14.5□□□□□ -0.09
PFKM-224ENST00000551548 ERCC6L2Q5T890 1561 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms