RNA–Protein interactions for RNA: ENST00000551485.5

PFKM-223, Transcript of phosphofructokinase, muscle, humanhuman

TSL 5

Gene PFKM, Length 689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-223ENST00000551485 NISCHQ9Y2I1 1504 aa27.09■■□□□ 1.93
PFKM-223ENST00000551485 ABCC9O60706 1549 aa24.66■■□□□ 1.54
PFKM-223ENST00000551485 CCDC180Q9P1Z9 1646 aa24.43■■□□□ 1.5
PFKM-223ENST00000551485 RB1CC1Q8TDY2 1594 aa23.37■■□□□ 1.33
PFKM-223ENST00000551485 DNAJC5BQ9UF47 199 aa23.33■■□□□ 1.33
PFKM-223ENST00000551485 NACADO15069 1562 aa23.15■■□□□ 1.3
PFKM-223ENST00000551485 DCAF8L2P0C7V8 631 aa22.91■■□□□ 1.26
PFKM-223ENST00000551485 PABPN1Q86U42 306 aaKnown RBP eCLIP22.9■■□□□ 1.26
PFKM-223ENST00000551485 UNC13AQ9UPW8 1703 aa22.85■■□□□ 1.25
PFKM-223ENST00000551485 MYO15BQ96JP2 1530 aa22.77■■□□□ 1.24
PFKM-223ENST00000551485 BICRAQ9NZM4 1560 aa22.7■■□□□ 1.22
PFKM-223ENST00000551485 ZCCHC6Q5VYS8 1495 aaKnown RBP22.41■■□□□ 1.18
PFKM-223ENST00000551485 SHROOM4Q9ULL8 1493 aa22.4■■□□□ 1.18
PFKM-223ENST00000551485 DCAF1Q9Y4B6 1507 aa22.38■■□□□ 1.17
PFKM-223ENST00000551485 CC2D2AQ9P2K1 1620 aa22.27■■□□□ 1.16
PFKM-223ENST00000551485 CECR2Q9BXF3 1484 aa22.24■■□□□ 1.15
PFKM-223ENST00000551485 SCRIBQ14160 1630 aa22.24■■□□□ 1.15
PFKM-223ENST00000551485 EIF4G1Q04637 1599 aaKnown RBP22.16■■□□□ 1.14
PFKM-223ENST00000551485 DNAJC5Q9H3Z4 198 aa21.61■■□□□ 1.05
PFKM-223ENST00000551485 CUX2O14529 1486 aa21.38■■□□□ 1.01
PFKM-223ENST00000551485 NCAPD3P42695 1498 aa21.37■■□□□ 1.01
PFKM-223ENST00000551485 ERCC6Q03468 1493 aa21.31■■□□□ 1
PFKM-223ENST00000551485 ATAD2BQ9ULI0 1458 aa21.28■■□□□ 1
PFKM-223ENST00000551485 HMGXB3Q12766 1538 aa21.2■□□□□ 0.98
PFKM-223ENST00000551485 SMARCA2P51531 1590 aa21.2■□□□□ 0.98
PFKM-223ENST00000551485 SMARCA4P51532 1647 aa21.19■□□□□ 0.98
PFKM-223ENST00000551485 NESP48681 1621 aa21.11■□□□□ 0.97
PFKM-223ENST00000551485 BAZ1AQ9NRL2 1556 aaPredicted RBP21.06■□□□□ 0.96
PFKM-223ENST00000551485 BAZ1BQ9UIG0 1483 aaKnown RBP21.05■□□□□ 0.96
PFKM-223ENST00000551485 PEG3Q9GZU2 1588 aa21■□□□□ 0.95
PFKM-223ENST00000551485 THOC2Q8NI27 1593 aaKnown RBP20.97■□□□□ 0.95
PFKM-223ENST00000551485 LAMC3Q9Y6N6 1575 aa20.93■□□□□ 0.94
PFKM-223ENST00000551485 MROH2BQ7Z745 1585 aa20.87■□□□□ 0.93
PFKM-223ENST00000551485 KIF21AQ7Z4S6 1674 aa20.83■□□□□ 0.93
PFKM-223ENST00000551485 PDS5BQ9NTI5 1447 aa20.81■□□□□ 0.92
PFKM-223ENST00000551485 CADPSQ9ULU8 1353 aa20.71■□□□□ 0.91
PFKM-223ENST00000551485 MRC2Q9UBG0 1479 aa20.66■□□□□ 0.9
PFKM-223ENST00000551485 WDR62O43379 1518 aa20.63■□□□□ 0.89
PFKM-223ENST00000551485 WIZO95785 1651 aa20.61■□□□□ 0.89
PFKM-223ENST00000551485 TRIM41Q8WV44 630 aa20.55■□□□□ 0.88
PFKM-223ENST00000551485 CEP164Q9UPV0 1460 aa20.53■□□□□ 0.88
PFKM-223ENST00000551485 FANCD2Q9BXW9 1451 aa20.48■□□□□ 0.87
PFKM-223ENST00000551485 CFTRP13569 1480 aa20.43■□□□□ 0.86
PFKM-223ENST00000551485 TOP2AP11388 1531 aaKnown RBP20.34■□□□□ 0.85
PFKM-223ENST00000551485 RSF1Q96T23 1441 aaPredicted RBP20.34■□□□□ 0.85
PFKM-223ENST00000551485 URB2Q14146 1524 aaKnown RBP20.33■□□□□ 0.85
PFKM-223ENST00000551485 OSCARQ8IYS5 282 aa20.32■□□□□ 0.84
PFKM-223ENST00000551485 PRDM2Q13029 1718 aa20.21■□□□□ 0.83
PFKM-223ENST00000551485 IFT140Q96RY7 1462 aa20.13■□□□□ 0.81
PFKM-223ENST00000551485 ZNF608Q9ULD9 1512 aaPredicted RBP20.12■□□□□ 0.81
PFKM-223ENST00000551485 RIMBP3CA6NJZ7 1639 aa20.11■□□□□ 0.81
PFKM-223ENST00000551485 RIMBP3BA6NNM3 1639 aa20.11■□□□□ 0.81
PFKM-223ENST00000551485 RIMBP3Q9UFD9 1639 aa20.11■□□□□ 0.81
PFKM-223ENST00000551485 CCDC88BA6NC98 1476 aa20.1■□□□□ 0.81
PFKM-223ENST00000551485 TOPBP1Q92547 1522 aa20.07■□□□□ 0.8
PFKM-223ENST00000551485 ARHGEF11O15085 1522 aa20.02■□□□□ 0.8
PFKM-223ENST00000551485 EIF4G3O43432 1585 aaKnown RBP20■□□□□ 0.79
PFKM-223ENST00000551485 ABCC8Q09428 1581 aa20■□□□□ 0.79
PFKM-223ENST00000551485 DNMBPQ6XZF7 1577 aa19.97■□□□□ 0.79
PFKM-223ENST00000551485 TARBP1Q13395 1621 aaKnown RBP19.91■□□□□ 0.78
PFKM-223ENST00000551485 CHD1O14646 1710 aa19.89■□□□□ 0.77
PFKM-223ENST00000551485 AQRO60306 1485 aaKnown RBP eCLIP19.89■□□□□ 0.771e-6■■■■■ 33.8
PFKM-223ENST00000551485 CYB5RLQ6IPT4 315 aa19.86■□□□□ 0.77
PFKM-223ENST00000551485 POLA1P09884 1462 aaPredicted RBP19.85■□□□□ 0.77
PFKM-223ENST00000551485 ARAP1Q96P48 1450 aa19.82■□□□□ 0.76
PFKM-223ENST00000551485 FBLN2P98095 1184 aa19.78■□□□□ 0.76
PFKM-223ENST00000551485 RAD54L2Q9Y4B4 1467 aa19.76■□□□□ 0.75
PFKM-223ENST00000551485 SOGA1O94964 1423 aa19.74■□□□□ 0.75
PFKM-223ENST00000551485 TDRD9Q8NDG6 1382 aaKnown RBP19.72■□□□□ 0.75
PFKM-223ENST00000551485 TRHP20396 242 aaPredicted RBP19.71■□□□□ 0.75
PFKM-223ENST00000551485 WDR97A6NE52 1622 aa19.7■□□□□ 0.74
PFKM-223ENST00000551485 SNAPC4Q5SXM2 1469 aa19.7■□□□□ 0.74
PFKM-223ENST00000551485 FGD5Q6ZNL6 1462 aa19.68■□□□□ 0.74
PFKM-223ENST00000551485 CLASP1Q7Z460 1538 aa19.67■□□□□ 0.74
PFKM-223ENST00000551485 MAGI1Q96QZ7 1491 aaPredicted RBP19.64■□□□□ 0.73
PFKM-223ENST00000551485 SYNJ1O43426 1573 aa19.63■□□□□ 0.73
PFKM-223ENST00000551485 CUX1P39880 1505 aa19.63■□□□□ 0.73
PFKM-223ENST00000551485 CHMP7Q8WUX9 453 aaPredicted RBP19.61■□□□□ 0.73
PFKM-223ENST00000551485 GRIN2BQ13224 1484 aa19.6■□□□□ 0.73
PFKM-223ENST00000551485 SYNJ2O15056 1496 aa19.57■□□□□ 0.72
PFKM-223ENST00000551485 PBRM1Q86U86 1689 aa19.52■□□□□ 0.71
PFKM-223ENST00000551485 GAPVD1Q14C86 1478 aa19.5■□□□□ 0.71
PFKM-223ENST00000551485 ABCA5Q8WWZ7 1642 aa19.46■□□□□ 0.71
PFKM-223ENST00000551485 ABCA10Q8WWZ4 1543 aa19.46■□□□□ 0.71
PFKM-223ENST00000551485 GRIN2AQ12879 1464 aa19.35■□□□□ 0.69
PFKM-223ENST00000551485 ADAMTS12P58397 1594 aa19.33■□□□□ 0.69
PFKM-223ENST00000551485 ERCC6L2Q5T890 1561 aa19.33■□□□□ 0.69
PFKM-223ENST00000551485 AEBP2Q6ZN18 517 aaPredicted RBP19.32■□□□□ 0.68
PFKM-223ENST00000551485 NUP160Q12769 1436 aa19.31■□□□□ 0.68
PFKM-223ENST00000551485 WRNQ14191 1432 aaPredicted RBP eCLIP19.31■□□□□ 0.68
PFKM-223ENST00000551485 CEP170Q5SW79 1584 aa19.3■□□□□ 0.68
PFKM-223ENST00000551485 BIVM-ERCC5R4GMW8 1640 aa19.25■□□□□ 0.67
PFKM-223ENST00000551485 TOP2BQ02880 1626 aa19.25■□□□□ 0.67
PFKM-223ENST00000551485 SHROOM2Q13796 1616 aa19.25■□□□□ 0.67
PFKM-223ENST00000551485 FHAD1B1AJZ9 1412 aa19.25■□□□□ 0.67
PFKM-223ENST00000551485 SUPT5HO00267 1087 aaKnown RBP19.22■□□□□ 0.67
PFKM-223ENST00000551485 ERICH3Q5RHP9 1530 aa19.2■□□□□ 0.66
PFKM-223ENST00000551485 KIF13AQ9H1H9 1805 aa19.12■□□□□ 0.65
PFKM-223ENST00000551485 PRG4Q92954 1404 aaPredicted RBP19.12■□□□□ 0.65
PFKM-223ENST00000551485 JPH4Q96JJ6 628 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms