RNA–Protein interactions for RNA: ENST00000551468.1

DDX23-211, Transcript of DEAD-box helicase 23, humanhuman

TSL 5

Gene DDX23, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-211ENST00000551468 NISCHQ9Y2I1 1504 aa34.68■■■■□ 3.14
DDX23-211ENST00000551468 ABCC9O60706 1549 aa31.75■■■□□ 2.67
DDX23-211ENST00000551468 CCDC180Q9P1Z9 1646 aa31.37■■■□□ 2.61
DDX23-211ENST00000551468 DNAJC5BQ9UF47 199 aa30.08■■■□□ 2.41
DDX23-211ENST00000551468 RB1CC1Q8TDY2 1594 aa30.05■■■□□ 2.4
DDX23-211ENST00000551468 NACADO15069 1562 aa29.72■■■□□ 2.35
DDX23-211ENST00000551468 DCAF8L2P0C7V8 631 aa29.49■■■□□ 2.31
DDX23-211ENST00000551468 UNC13AQ9UPW8 1703 aa29.46■■■□□ 2.31
DDX23-211ENST00000551468 PABPN1Q86U42 306 aaKnown RBP eCLIP29.46■■■□□ 2.31
DDX23-211ENST00000551468 BICRAQ9NZM4 1560 aa29.16■■■□□ 2.26
DDX23-211ENST00000551468 MYO15BQ96JP2 1530 aa29.12■■■□□ 2.25
DDX23-211ENST00000551468 SHROOM4Q9ULL8 1493 aa28.7■■■□□ 2.18
DDX23-211ENST00000551468 CC2D2AQ9P2K1 1620 aa28.68■■■□□ 2.18
DDX23-211ENST00000551468 ZCCHC6Q5VYS8 1495 aaKnown RBP28.65■■■□□ 2.18
DDX23-211ENST00000551468 CECR2Q9BXF3 1484 aa28.63■■■□□ 2.17
DDX23-211ENST00000551468 DCAF1Q9Y4B6 1507 aa28.6■■■□□ 2.17
DDX23-211ENST00000551468 SCRIBQ14160 1630 aa28.57■■■□□ 2.16
DDX23-211ENST00000551468 EIF4G1Q04637 1599 aaKnown RBP28.5■■■□□ 2.15
DDX23-211ENST00000551468 DNAJC5Q9H3Z4 198 aa27.94■■■□□ 2.06
DDX23-211ENST00000551468 CUX2O14529 1486 aa27.51■■■□□ 2
DDX23-211ENST00000551468 ERCC6Q03468 1493 aa27.46■■□□□ 1.99
DDX23-211ENST00000551468 NCAPD3P42695 1498 aa27.39■■□□□ 1.98
DDX23-211ENST00000551468 ATAD2BQ9ULI0 1458 aa27.27■■□□□ 1.96
DDX23-211ENST00000551468 SMARCA2P51531 1590 aa27.21■■□□□ 1.95
DDX23-211ENST00000551468 HMGXB3Q12766 1538 aa27.2■■□□□ 1.94
DDX23-211ENST00000551468 SMARCA4P51532 1647 aa27.19■■□□□ 1.94
DDX23-211ENST00000551468 NESP48681 1621 aa27.14■■□□□ 1.94
DDX23-211ENST00000551468 BAZ1BQ9UIG0 1483 aaKnown RBP27.02■■□□□ 1.92
DDX23-211ENST00000551468 THOC2Q8NI27 1593 aaKnown RBP26.97■■□□□ 1.91
DDX23-211ENST00000551468 BAZ1AQ9NRL2 1556 aaPredicted RBP26.97■■□□□ 1.91
DDX23-211ENST00000551468 LAMC3Q9Y6N6 1575 aa26.9■■□□□ 1.9
DDX23-211ENST00000551468 PEG3Q9GZU2 1588 aa26.88■■□□□ 1.89
DDX23-211ENST00000551468 KIF21AQ7Z4S6 1674 aa26.86■■□□□ 1.89
DDX23-211ENST00000551468 PDS5BQ9NTI5 1447 aa26.73■■□□□ 1.87
DDX23-211ENST00000551468 MROH2BQ7Z745 1585 aa26.72■■□□□ 1.87
DDX23-211ENST00000551468 TRIM41Q8WV44 630 aa26.61■■□□□ 1.85
DDX23-211ENST00000551468 CADPSQ9ULU8 1353 aa26.55■■□□□ 1.84
DDX23-211ENST00000551468 MRC2Q9UBG0 1479 aa26.55■■□□□ 1.84
DDX23-211ENST00000551468 WDR62O43379 1518 aa26.49■■□□□ 1.83
DDX23-211ENST00000551468 WIZO95785 1651 aa26.44■■□□□ 1.82
DDX23-211ENST00000551468 CEP164Q9UPV0 1460 aa26.36■■□□□ 1.81
DDX23-211ENST00000551468 FANCD2Q9BXW9 1451 aa26.29■■□□□ 1.8
DDX23-211ENST00000551468 OSCARQ8IYS5 282 aa26.18■■□□□ 1.78
DDX23-211ENST00000551468 CFTRP13569 1480 aa26.17■■□□□ 1.78
DDX23-211ENST00000551468 URB2Q14146 1524 aaKnown RBP26.09■■□□□ 1.77
DDX23-211ENST00000551468 TOP2AP11388 1531 aaKnown RBP26.04■■□□□ 1.76
DDX23-211ENST00000551468 PRDM2Q13029 1718 aa26.02■■□□□ 1.76
DDX23-211ENST00000551468 RSF1Q96T23 1441 aaPredicted RBP25.99■■□□□ 1.75
DDX23-211ENST00000551468 RIMBP3CA6NJZ7 1639 aa25.94■■□□□ 1.74
DDX23-211ENST00000551468 RIMBP3BA6NNM3 1639 aa25.94■■□□□ 1.74
DDX23-211ENST00000551468 RIMBP3Q9UFD9 1639 aa25.94■■□□□ 1.74
DDX23-211ENST00000551468 ZNF608Q9ULD9 1512 aaPredicted RBP25.83■■□□□ 1.73
DDX23-211ENST00000551468 IFT140Q96RY7 1462 aa25.83■■□□□ 1.73
DDX23-211ENST00000551468 ARHGEF11O15085 1522 aa25.78■■□□□ 1.72
DDX23-211ENST00000551468 TOPBP1Q92547 1522 aa25.73■■□□□ 1.71
DDX23-211ENST00000551468 CCDC88BA6NC98 1476 aa25.72■■□□□ 1.71
DDX23-211ENST00000551468 EIF4G3O43432 1585 aaKnown RBP25.72■■□□□ 1.71
DDX23-211ENST00000551468 CHD1O14646 1710 aa25.66■■□□□ 1.7
DDX23-211ENST00000551468 ABCC8Q09428 1581 aa25.65■■□□□ 1.7
DDX23-211ENST00000551468 DNMBPQ6XZF7 1577 aa25.63■■□□□ 1.69
DDX23-211ENST00000551468 CYB5RLQ6IPT4 315 aa25.61■■□□□ 1.69
DDX23-211ENST00000551468 TARBP1Q13395 1621 aaKnown RBP25.55■■□□□ 1.68
DDX23-211ENST00000551468 AQRO60306 1485 aaKnown RBP eCLIP25.54■■□□□ 1.68
DDX23-211ENST00000551468 ARAP1Q96P48 1450 aa25.49■■□□□ 1.67
DDX23-211ENST00000551468 TRHP20396 242 aaPredicted RBP25.49■■□□□ 1.67
DDX23-211ENST00000551468 FBLN2P98095 1184 aa25.49■■□□□ 1.67
DDX23-211ENST00000551468 POLA1P09884 1462 aaPredicted RBP25.44■■□□□ 1.66
DDX23-211ENST00000551468 RAD54L2Q9Y4B4 1467 aa25.36■■□□□ 1.65
DDX23-211ENST00000551468 TDRD9Q8NDG6 1382 aaKnown RBP25.31■■□□□ 1.64
DDX23-211ENST00000551468 SOGA1O94964 1423 aa25.31■■□□□ 1.64
DDX23-211ENST00000551468 SNAPC4Q5SXM2 1469 aa25.29■■□□□ 1.64
DDX23-211ENST00000551468 WDR97A6NE52 1622 aa25.27■■□□□ 1.64
DDX23-211ENST00000551468 CLASP1Q7Z460 1538 aa25.26■■□□□ 1.63
DDX23-211ENST00000551468 SYNJ1O43426 1573 aa25.25■■□□□ 1.63
DDX23-211ENST00000551468 FGD5Q6ZNL6 1462 aa25.23■■□□□ 1.63
DDX23-211ENST00000551468 CHMP7Q8WUX9 453 aaPredicted RBP25.21■■□□□ 1.63
DDX23-211ENST00000551468 MAGI1Q96QZ7 1491 aaPredicted RBP25.2■■□□□ 1.62
DDX23-211ENST00000551468 GRIN2BQ13224 1484 aa25.15■■□□□ 1.62
DDX23-211ENST00000551468 CUX1P39880 1505 aa25.14■■□□□ 1.62
DDX23-211ENST00000551468 SYNJ2O15056 1496 aa25.12■■□□□ 1.61
DDX23-211ENST00000551468 PBRM1Q86U86 1689 aa25.12■■□□□ 1.61
DDX23-211ENST00000551468 AEBP2Q6ZN18 517 aaPredicted RBP25.07■■□□□ 1.6
DDX23-211ENST00000551468 GAPVD1Q14C86 1478 aa25.02■■□□□ 1.6
DDX23-211ENST00000551468 ABCA5Q8WWZ7 1642 aa24.94■■□□□ 1.58
DDX23-211ENST00000551468 ABCA10Q8WWZ4 1543 aa24.91■■□□□ 1.58
DDX23-211ENST00000551468 ERCC6L2Q5T890 1561 aa24.85■■□□□ 1.57
DDX23-211ENST00000551468 GRIN2AQ12879 1464 aa24.83■■□□□ 1.56
DDX23-211ENST00000551468 ADAMTS12P58397 1594 aa24.79■■□□□ 1.56
DDX23-211ENST00000551468 CEP170Q5SW79 1584 aa24.79■■□□□ 1.56
DDX23-211ENST00000551468 NUP160Q12769 1436 aa24.74■■□□□ 1.55
DDX23-211ENST00000551468 WRNQ14191 1432 aaPredicted RBP eCLIP24.73■■□□□ 1.55
DDX23-211ENST00000551468 SHROOM2Q13796 1616 aa24.72■■□□□ 1.55
DDX23-211ENST00000551468 KIF13AQ9H1H9 1805 aa24.7■■□□□ 1.54
DDX23-211ENST00000551468 BIVM-ERCC5R4GMW8 1640 aa24.67■■□□□ 1.54
DDX23-211ENST00000551468 FHAD1B1AJZ9 1412 aa24.66■■□□□ 1.54
DDX23-211ENST00000551468 TOP2BQ02880 1626 aa24.64■■□□□ 1.54
DDX23-211ENST00000551468 ERICH3Q5RHP9 1530 aa24.6■■□□□ 1.53
DDX23-211ENST00000551468 SUPT5HO00267 1087 aaKnown RBP24.57■■□□□ 1.52
DDX23-211ENST00000551468 PRG4Q92954 1404 aaPredicted RBP24.55■■□□□ 1.52
DDX23-211ENST00000551468 JPH4Q96JJ6 628 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms