RNA–Protein interactions for RNA: ENST00000551442.5

PPFIA2-223, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 4

Gene PPFIA2, Length 825 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-223ENST00000551442 NISCHQ9Y2I1 1504 aa32.6■■■□□ 2.81
PPFIA2-223ENST00000551442 ABCC9O60706 1549 aa30.12■■■□□ 2.41
PPFIA2-223ENST00000551442 CCDC180Q9P1Z9 1646 aa29.38■■■□□ 2.29
PPFIA2-223ENST00000551442 DNAJC5BQ9UF47 199 aa28.91■■■□□ 2.22
PPFIA2-223ENST00000551442 RB1CC1Q8TDY2 1594 aa28.28■■■□□ 2.12
PPFIA2-223ENST00000551442 PABPN1Q86U42 306 aaKnown RBP eCLIP28.03■■■□□ 2.08
PPFIA2-223ENST00000551442 NACADO15069 1562 aa27.95■■■□□ 2.07
PPFIA2-223ENST00000551442 DCAF8L2P0C7V8 631 aa27.85■■■□□ 2.05
PPFIA2-223ENST00000551442 UNC13AQ9UPW8 1703 aa27.7■■■□□ 2.02
PPFIA2-223ENST00000551442 BICRAQ9NZM4 1560 aa27.6■■■□□ 2.01
PPFIA2-223ENST00000551442 MYO15BQ96JP2 1530 aa27.36■■□□□ 1.97
PPFIA2-223ENST00000551442 CECR2Q9BXF3 1484 aa27.14■■□□□ 1.94
PPFIA2-223ENST00000551442 CC2D2AQ9P2K1 1620 aa27.12■■□□□ 1.93
PPFIA2-223ENST00000551442 SHROOM4Q9ULL8 1493 aa26.97■■□□□ 1.91
PPFIA2-223ENST00000551442 EIF4G1Q04637 1599 aaKnown RBP26.92■■□□□ 1.9
PPFIA2-223ENST00000551442 AEBP2Q6ZN18 517 aaPredicted RBP26.91■■□□□ 1.9
PPFIA2-223ENST00000551442 ZCCHC6Q5VYS8 1495 aaKnown RBP26.88■■□□□ 1.89
PPFIA2-223ENST00000551442 SCRIBQ14160 1630 aa26.85■■□□□ 1.89
PPFIA2-223ENST00000551442 DNAJC5Q9H3Z4 198 aa26.84■■□□□ 1.89
PPFIA2-223ENST00000551442 DCAF1Q9Y4B6 1507 aa26.81■■□□□ 1.88
PPFIA2-223ENST00000551442 CUX2O14529 1486 aa26.07■■□□□ 1.76
PPFIA2-223ENST00000551442 ERCC6Q03468 1493 aa25.95■■□□□ 1.74
PPFIA2-223ENST00000551442 NCAPD3P42695 1498 aa25.88■■□□□ 1.73
PPFIA2-223ENST00000551442 NESP48681 1621 aa25.74■■□□□ 1.71
PPFIA2-223ENST00000551442 ATAD2BQ9ULI0 1458 aa25.74■■□□□ 1.71
PPFIA2-223ENST00000551442 HMGXB3Q12766 1538 aa25.57■■□□□ 1.68
PPFIA2-223ENST00000551442 SMARCA2P51531 1590 aa25.54■■□□□ 1.68
PPFIA2-223ENST00000551442 SMARCA4P51532 1647 aa25.52■■□□□ 1.68
PPFIA2-223ENST00000551442 THOC2Q8NI27 1593 aaKnown RBP25.49■■□□□ 1.67
PPFIA2-223ENST00000551442 CHIC1Q5VXU3 224 aa25.48■■□□□ 1.67
PPFIA2-223ENST00000551442 TRIM41Q8WV44 630 aa25.44■■□□□ 1.66
PPFIA2-223ENST00000551442 BAZ1BQ9UIG0 1483 aaKnown RBP25.4■■□□□ 1.66
PPFIA2-223ENST00000551442 LAMC3Q9Y6N6 1575 aa25.31■■□□□ 1.64
PPFIA2-223ENST00000551442 KIF21AQ7Z4S6 1674 aa25.29■■□□□ 1.64
PPFIA2-223ENST00000551442 BAZ1AQ9NRL2 1556 aaPredicted RBP25.27■■□□□ 1.64
PPFIA2-223ENST00000551442 PEG3Q9GZU2 1588 aa25.26■■□□□ 1.63
PPFIA2-223ENST00000551442 PDS5BQ9NTI5 1447 aa25.21■■□□□ 1.63
PPFIA2-223ENST00000551442 MROH2BQ7Z745 1585 aa25.17■■□□□ 1.62
PPFIA2-223ENST00000551442 CADPSQ9ULU8 1353 aa25.07■■□□□ 1.6
PPFIA2-223ENST00000551442 MRC2Q9UBG0 1479 aa25.04■■□□□ 1.6
PPFIA2-223ENST00000551442 WDR62O43379 1518 aa25.01■■□□□ 1.59
PPFIA2-223ENST00000551442 OSCARQ8IYS5 282 aa24.86■■□□□ 1.57
PPFIA2-223ENST00000551442 CEP164Q9UPV0 1460 aa24.82■■□□□ 1.56
PPFIA2-223ENST00000551442 WIZO95785 1651 aa24.81■■□□□ 1.56
PPFIA2-223ENST00000551442 FANCD2Q9BXW9 1451 aa24.78■■□□□ 1.56
PPFIA2-223ENST00000551442 CFTRP13569 1480 aa24.66■■□□□ 1.54
PPFIA2-223ENST00000551442 URB2Q14146 1524 aaKnown RBP24.66■■□□□ 1.54
PPFIA2-223ENST00000551442 RIMBP3CA6NJZ7 1639 aa24.59■■□□□ 1.53
PPFIA2-223ENST00000551442 RIMBP3BA6NNM3 1639 aa24.59■■□□□ 1.53
PPFIA2-223ENST00000551442 RIMBP3Q9UFD9 1639 aa24.59■■□□□ 1.53
PPFIA2-223ENST00000551442 ZNF608Q9ULD9 1512 aaPredicted RBP24.48■■□□□ 1.51
PPFIA2-223ENST00000551442 ARHGEF11O15085 1522 aa24.46■■□□□ 1.51
PPFIA2-223ENST00000551442 RSF1Q96T23 1441 aaPredicted RBP24.44■■□□□ 1.5
PPFIA2-223ENST00000551442 TOP2AP11388 1531 aaKnown RBP24.4■■□□□ 1.5
PPFIA2-223ENST00000551442 CYB5RLQ6IPT4 315 aa24.38■■□□□ 1.49
PPFIA2-223ENST00000551442 IFT140Q96RY7 1462 aa24.35■■□□□ 1.49
PPFIA2-223ENST00000551442 TOPBP1Q92547 1522 aa24.25■■□□□ 1.47
PPFIA2-223ENST00000551442 TRHP20396 242 aaPredicted RBP24.25■■□□□ 1.47
PPFIA2-223ENST00000551442 PRDM2Q13029 1718 aa24.24■■□□□ 1.47
PPFIA2-223ENST00000551442 EIF4G3O43432 1585 aaKnown RBP24.21■■□□□ 1.47
PPFIA2-223ENST00000551442 ARAP1Q96P48 1450 aa24.21■■□□□ 1.47
PPFIA2-223ENST00000551442 CCDC88BA6NC98 1476 aa24.2■■□□□ 1.47
PPFIA2-223ENST00000551442 AQRO60306 1485 aaKnown RBP eCLIP24.19■■□□□ 1.46
PPFIA2-223ENST00000551442 CHD1O14646 1710 aa24.14■■□□□ 1.45
PPFIA2-223ENST00000551442 FBLN2P98095 1184 aa24.12■■□□□ 1.45
PPFIA2-223ENST00000551442 TARBP1Q13395 1621 aaKnown RBP24.08■■□□□ 1.45
PPFIA2-223ENST00000551442 DNMBPQ6XZF7 1577 aa24.07■■□□□ 1.44
PPFIA2-223ENST00000551442 ABCC8Q09428 1581 aa24.06■■□□□ 1.44
PPFIA2-223ENST00000551442 POLA1P09884 1462 aaPredicted RBP23.98■■□□□ 1.43
PPFIA2-223ENST00000551442 RAD54L2Q9Y4B4 1467 aa23.97■■□□□ 1.43
PPFIA2-223ENST00000551442 TDRD9Q8NDG6 1382 aaKnown RBP23.95■■□□□ 1.42
PPFIA2-223ENST00000551442 CLASP1Q7Z460 1538 aa23.87■■□□□ 1.41
PPFIA2-223ENST00000551442 SOGA1O94964 1423 aa23.86■■□□□ 1.41
PPFIA2-223ENST00000551442 SNAPC4Q5SXM2 1469 aa23.86■■□□□ 1.41
PPFIA2-223ENST00000551442 CHMP7Q8WUX9 453 aaPredicted RBP23.81■■□□□ 1.4
PPFIA2-223ENST00000551442 FGD5Q6ZNL6 1462 aa23.75■■□□□ 1.39
PPFIA2-223ENST00000551442 SYNJ1O43426 1573 aa23.74■■□□□ 1.39
PPFIA2-223ENST00000551442 MAGI1Q96QZ7 1491 aaPredicted RBP23.7■■□□□ 1.38
PPFIA2-223ENST00000551442 GRIN2BQ13224 1484 aa23.68■■□□□ 1.38
PPFIA2-223ENST00000551442 SYNJ2O15056 1496 aa23.67■■□□□ 1.38
PPFIA2-223ENST00000551442 GAPVD1Q14C86 1478 aa23.67■■□□□ 1.38
PPFIA2-223ENST00000551442 CUX1P39880 1505 aa23.66■■□□□ 1.38
PPFIA2-223ENST00000551442 WDR97A6NE52 1622 aa23.65■■□□□ 1.38
PPFIA2-223ENST00000551442 ERCC6L2Q5T890 1561 aa23.56■■□□□ 1.36
PPFIA2-223ENST00000551442 PBRM1Q86U86 1689 aa23.51■■□□□ 1.35
PPFIA2-223ENST00000551442 ABCA5Q8WWZ7 1642 aa23.42■■□□□ 1.34
PPFIA2-223ENST00000551442 ABCA10Q8WWZ4 1543 aa23.42■■□□□ 1.34
PPFIA2-223ENST00000551442 GRIN2AQ12879 1464 aa23.39■■□□□ 1.34
PPFIA2-223ENST00000551442 CEP170Q5SW79 1584 aa23.38■■□□□ 1.33
PPFIA2-223ENST00000551442 NUP160Q12769 1436 aa23.34■■□□□ 1.33
PPFIA2-223ENST00000551442 KIF13AQ9H1H9 1805 aa23.29■■□□□ 1.32
PPFIA2-223ENST00000551442 ADAMTS12P58397 1594 aa23.27■■□□□ 1.32
PPFIA2-223ENST00000551442 SHROOM2Q13796 1616 aa23.27■■□□□ 1.32
PPFIA2-223ENST00000551442 FHAD1B1AJZ9 1412 aa23.2■■□□□ 1.3
PPFIA2-223ENST00000551442 WRNQ14191 1432 aaPredicted RBP eCLIP23.2■■□□□ 1.3
PPFIA2-223ENST00000551442 PRG4Q92954 1404 aaPredicted RBP23.18■■□□□ 1.3
PPFIA2-223ENST00000551442 FAM69CQ0P6D2 419 aa23.17■■□□□ 1.3
PPFIA2-223ENST00000551442 JPH4Q96JJ6 628 aa23.15■■□□□ 1.3
PPFIA2-223ENST00000551442 KDM4FA0A1W2PPD8 638 aa23.14■■□□□ 1.29
PPFIA2-223ENST00000551442 ABCC10Q5T3U5 1492 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms