RNA–Protein interactions for RNA: ENST00000551339.5

PFKM-222, Transcript of phosphofructokinase, muscle, humanhuman

TSL 4

Gene PFKM, Length 526 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-222ENST00000551339 NISCHQ9Y2I1 1504 aa23.83■■□□□ 1.41
PFKM-222ENST00000551339 CCDC180Q9P1Z9 1646 aa21.22■□□□□ 0.99
PFKM-222ENST00000551339 ABCC9O60706 1549 aa21.09■□□□□ 0.97
PFKM-222ENST00000551339 RB1CC1Q8TDY2 1594 aa20.13■□□□□ 0.81
PFKM-222ENST00000551339 DCAF8L2P0C7V8 631 aa20.08■□□□□ 0.81
PFKM-222ENST00000551339 NACADO15069 1562 aa20.06■□□□□ 0.8
PFKM-222ENST00000551339 MYO15BQ96JP2 1530 aa19.86■□□□□ 0.77
PFKM-222ENST00000551339 ZCCHC6Q5VYS8 1495 aaKnown RBP19.76■□□□□ 0.75
PFKM-222ENST00000551339 PABPN1Q86U42 306 aaKnown RBP eCLIP19.73■□□□□ 0.75
PFKM-222ENST00000551339 DNAJC5BQ9UF47 199 aa19.73■□□□□ 0.75
PFKM-222ENST00000551339 DCAF1Q9Y4B6 1507 aa19.68■□□□□ 0.74
PFKM-222ENST00000551339 UNC13AQ9UPW8 1703 aa19.64■□□□□ 0.73
PFKM-222ENST00000551339 BICRAQ9NZM4 1560 aa19.57■□□□□ 0.72
PFKM-222ENST00000551339 SCRIBQ14160 1630 aa19.37■□□□□ 0.69
PFKM-222ENST00000551339 SHROOM4Q9ULL8 1493 aa19.29■□□□□ 0.68
PFKM-222ENST00000551339 EIF4G1Q04637 1599 aaKnown RBP19.06■□□□□ 0.64
PFKM-222ENST00000551339 CC2D2AQ9P2K1 1620 aa19.05■□□□□ 0.64
PFKM-222ENST00000551339 CECR2Q9BXF3 1484 aa18.98■□□□□ 0.63
PFKM-222ENST00000551339 DNAJC5Q9H3Z4 198 aa18.62■□□□□ 0.57
PFKM-222ENST00000551339 NCAPD3P42695 1498 aa18.56■□□□□ 0.56
PFKM-222ENST00000551339 ATAD2BQ9ULI0 1458 aa18.52■□□□□ 0.56
PFKM-222ENST00000551339 SMARCA4P51532 1647 aa18.51■□□□□ 0.55
PFKM-222ENST00000551339 BAZ1AQ9NRL2 1556 aaPredicted RBP18.46■□□□□ 0.55
PFKM-222ENST00000551339 SMARCA2P51531 1590 aa18.44■□□□□ 0.54
PFKM-222ENST00000551339 HMGXB3Q12766 1538 aa18.38■□□□□ 0.53
PFKM-222ENST00000551339 MROH2BQ7Z745 1585 aa18.37■□□□□ 0.53
PFKM-222ENST00000551339 PEG3Q9GZU2 1588 aa18.34■□□□□ 0.53
PFKM-222ENST00000551339 BAZ1BQ9UIG0 1483 aaKnown RBP18.32■□□□□ 0.52
PFKM-222ENST00000551339 NESP48681 1621 aa18.19■□□□□ 0.5
PFKM-222ENST00000551339 ERCC6Q03468 1493 aa18.18■□□□□ 0.5
PFKM-222ENST00000551339 WIZO95785 1651 aa18.13■□□□□ 0.49
PFKM-222ENST00000551339 CUX2O14529 1486 aa18.08■□□□□ 0.49
PFKM-222ENST00000551339 RSF1Q96T23 1441 aaPredicted RBP18.08■□□□□ 0.49
PFKM-222ENST00000551339 LAMC3Q9Y6N6 1575 aa18.05■□□□□ 0.48
PFKM-222ENST00000551339 CADPSQ9ULU8 1353 aa18.02■□□□□ 0.47
PFKM-222ENST00000551339 PDS5BQ9NTI5 1447 aa17.98■□□□□ 0.47
PFKM-222ENST00000551339 THOC2Q8NI27 1593 aaKnown RBP17.91■□□□□ 0.46
PFKM-222ENST00000551339 TOP2AP11388 1531 aaKnown RBP17.9■□□□□ 0.46
PFKM-222ENST00000551339 KIF21AQ7Z4S6 1674 aa17.89■□□□□ 0.45
PFKM-222ENST00000551339 CFTRP13569 1480 aa17.83■□□□□ 0.45
PFKM-222ENST00000551339 MRC2Q9UBG0 1479 aa17.79■□□□□ 0.44
PFKM-222ENST00000551339 FANCD2Q9BXW9 1451 aa17.77■□□□□ 0.44
PFKM-222ENST00000551339 CCDC88BA6NC98 1476 aa17.75■□□□□ 0.43
PFKM-222ENST00000551339 CEP164Q9UPV0 1460 aa17.75■□□□□ 0.43
PFKM-222ENST00000551339 WDR62O43379 1518 aa17.73■□□□□ 0.43
PFKM-222ENST00000551339 URB2Q14146 1524 aaKnown RBP17.62■□□□□ 0.41
PFKM-222ENST00000551339 PRDM2Q13029 1718 aa17.55■□□□□ 0.4
PFKM-222ENST00000551339 TRIM41Q8WV44 630 aa17.53■□□□□ 0.4
PFKM-222ENST00000551339 TOPBP1Q92547 1522 aa17.46■□□□□ 0.39
PFKM-222ENST00000551339 SUPT5HO00267 1087 aaKnown RBP17.45■□□□□ 0.38
PFKM-222ENST00000551339 ABCC8Q09428 1581 aa17.44■□□□□ 0.38
PFKM-222ENST00000551339 IFT140Q96RY7 1462 aa17.41■□□□□ 0.38
PFKM-222ENST00000551339 DNMBPQ6XZF7 1577 aa17.39■□□□□ 0.37
PFKM-222ENST00000551339 ZNF608Q9ULD9 1512 aaPredicted RBP17.38■□□□□ 0.37
PFKM-222ENST00000551339 OSCARQ8IYS5 282 aa17.37■□□□□ 0.37
PFKM-222ENST00000551339 POLA1P09884 1462 aaPredicted RBP17.29■□□□□ 0.36
PFKM-222ENST00000551339 TARBP1Q13395 1621 aaKnown RBP17.27■□□□□ 0.36
PFKM-222ENST00000551339 AQRO60306 1485 aaKnown RBP eCLIP17.26■□□□□ 0.351e-6■■■■■ 33.8
PFKM-222ENST00000551339 SOGA1O94964 1423 aa17.25■□□□□ 0.35
PFKM-222ENST00000551339 RAD54L2Q9Y4B4 1467 aa17.24■□□□□ 0.35
PFKM-222ENST00000551339 CUX1P39880 1505 aa17.23■□□□□ 0.35
PFKM-222ENST00000551339 EIF4G3O43432 1585 aaKnown RBP17.23■□□□□ 0.35
PFKM-222ENST00000551339 FGD5Q6ZNL6 1462 aa17.21■□□□□ 0.35
PFKM-222ENST00000551339 TDRD9Q8NDG6 1382 aaKnown RBP17.2■□□□□ 0.34
PFKM-222ENST00000551339 FBLN2P98095 1184 aa17.12■□□□□ 0.33
PFKM-222ENST00000551339 WDR97A6NE52 1622 aa17.08■□□□□ 0.32
PFKM-222ENST00000551339 GRIN2BQ13224 1484 aa17.05■□□□□ 0.32
PFKM-222ENST00000551339 SNAPC4Q5SXM2 1469 aa17.05■□□□□ 0.32
PFKM-222ENST00000551339 CHD1O14646 1710 aa17.05■□□□□ 0.32
PFKM-222ENST00000551339 RIMBP3CA6NJZ7 1639 aa17.03■□□□□ 0.32
PFKM-222ENST00000551339 RIMBP3BA6NNM3 1639 aa17.03■□□□□ 0.32
PFKM-222ENST00000551339 RIMBP3Q9UFD9 1639 aa17.03■□□□□ 0.32
PFKM-222ENST00000551339 ABCA10Q8WWZ4 1543 aa17.03■□□□□ 0.32
PFKM-222ENST00000551339 CHMP7Q8WUX9 453 aaPredicted RBP17.03■□□□□ 0.32
PFKM-222ENST00000551339 WRNQ14191 1432 aaPredicted RBP eCLIP17.03■□□□□ 0.32
PFKM-222ENST00000551339 GAPVD1Q14C86 1478 aa17.02■□□□□ 0.32
PFKM-222ENST00000551339 MAGI1Q96QZ7 1491 aaPredicted RBP17.02■□□□□ 0.32
PFKM-222ENST00000551339 ARHGEF11O15085 1522 aa17.01■□□□□ 0.31
PFKM-222ENST00000551339 TOP2BQ02880 1626 aa16.99■□□□□ 0.31
PFKM-222ENST00000551339 SYNJ1O43426 1573 aa16.98■□□□□ 0.31
PFKM-222ENST00000551339 BIVM-ERCC5R4GMW8 1640 aa16.97■□□□□ 0.31
PFKM-222ENST00000551339 SYNJ2O15056 1496 aa16.97■□□□□ 0.31
PFKM-222ENST00000551339 ABCA5Q8WWZ7 1642 aa16.96■□□□□ 0.3
PFKM-222ENST00000551339 CYB5RLQ6IPT4 315 aa16.95■□□□□ 0.3
PFKM-222ENST00000551339 PBRM1Q86U86 1689 aa16.92■□□□□ 0.3
PFKM-222ENST00000551339 CLASP1Q7Z460 1538 aa16.91■□□□□ 0.3
PFKM-222ENST00000551339 ARAP1Q96P48 1450 aa16.87■□□□□ 0.29
PFKM-222ENST00000551339 GRIN2AQ12879 1464 aa16.82■□□□□ 0.28
PFKM-222ENST00000551339 FHAD1B1AJZ9 1412 aa16.82■□□□□ 0.28
PFKM-222ENST00000551339 ADAMTS12P58397 1594 aa16.81■□□□□ 0.28
PFKM-222ENST00000551339 ERICH3Q5RHP9 1530 aa16.8■□□□□ 0.28
PFKM-222ENST00000551339 NUP160Q12769 1436 aa16.78■□□□□ 0.28
PFKM-222ENST00000551339 CEP170Q5SW79 1584 aa16.74■□□□□ 0.27
PFKM-222ENST00000551339 IGF1RP08069 1367 aa16.71■□□□□ 0.27
PFKM-222ENST00000551339 KIF27Q86VH2 1401 aa16.7■□□□□ 0.26
PFKM-222ENST00000551339 ERCC6L2Q5T890 1561 aa16.68■□□□□ 0.26
PFKM-222ENST00000551339 TRHP20396 242 aaPredicted RBP16.67■□□□□ 0.26
PFKM-222ENST00000551339 JPH4Q96JJ6 628 aa16.66■□□□□ 0.26
PFKM-222ENST00000551339 SHROOM2Q13796 1616 aa16.64■□□□□ 0.25
PFKM-222ENST00000551339 AEBP2Q6ZN18 517 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms