RNA–Protein interactions for RNA: ENST00000551331.1

DDX23-210, Transcript of DEAD-box helicase 23, humanhuman

TSL 2

Gene DDX23, Length 706 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-210ENST00000551331 NISCHQ9Y2I1 1504 aa23.69■■□□□ 1.38
DDX23-210ENST00000551331 ABCC9O60706 1549 aa22.19■■□□□ 1.14
DDX23-210ENST00000551331 CCDC180Q9P1Z9 1646 aa21.56■■□□□ 1.04
DDX23-210ENST00000551331 DNAJC5BQ9UF47 199 aa21.48■■□□□ 1.03
DDX23-210ENST00000551331 RB1CC1Q8TDY2 1594 aa20.82■□□□□ 0.92
DDX23-210ENST00000551331 PABPN1Q86U42 306 aaKnown RBP eCLIP20.53■□□□□ 0.88
DDX23-210ENST00000551331 NACADO15069 1562 aa20.53■□□□□ 0.88
DDX23-210ENST00000551331 UNC13AQ9UPW8 1703 aa20.41■□□□□ 0.86
DDX23-210ENST00000551331 BICRAQ9NZM4 1560 aa20.32■□□□□ 0.84
DDX23-210ENST00000551331 DNAJC5Q9H3Z4 198 aa20.19■□□□□ 0.82
DDX23-210ENST00000551331 DCAF8L2P0C7V8 631 aa20.15■□□□□ 0.82
DDX23-210ENST00000551331 CECR2Q9BXF3 1484 aa20.06■□□□□ 0.8
DDX23-210ENST00000551331 MYO15BQ96JP2 1530 aa20.06■□□□□ 0.8
DDX23-210ENST00000551331 CC2D2AQ9P2K1 1620 aa20.03■□□□□ 0.8
DDX23-210ENST00000551331 SHROOM4Q9ULL8 1493 aa19.93■□□□□ 0.78
DDX23-210ENST00000551331 EIF4G1Q04637 1599 aaKnown RBP19.83■□□□□ 0.76
DDX23-210ENST00000551331 SCRIBQ14160 1630 aa19.57■□□□□ 0.72
DDX23-210ENST00000551331 DCAF1Q9Y4B6 1507 aa19.55■□□□□ 0.72
DDX23-210ENST00000551331 ZCCHC6Q5VYS8 1495 aaKnown RBP19.5■□□□□ 0.71
DDX23-210ENST00000551331 CUX2O14529 1486 aa19.41■□□□□ 0.7
DDX23-210ENST00000551331 ERCC6Q03468 1493 aa19.16■□□□□ 0.66
DDX23-210ENST00000551331 NCAPD3P42695 1498 aa18.98■□□□□ 0.63
DDX23-210ENST00000551331 TRIM41Q8WV44 630 aa18.94■□□□□ 0.62
DDX23-210ENST00000551331 NESP48681 1621 aa18.89■□□□□ 0.62
DDX23-210ENST00000551331 THOC2Q8NI27 1593 aaKnown RBP18.86■□□□□ 0.61
DDX23-210ENST00000551331 ATAD2BQ9ULI0 1458 aa18.82■□□□□ 0.6
DDX23-210ENST00000551331 HMGXB3Q12766 1538 aa18.78■□□□□ 0.6
DDX23-210ENST00000551331 SMARCA2P51531 1590 aa18.71■□□□□ 0.59
DDX23-210ENST00000551331 LAMC3Q9Y6N6 1575 aa18.64■□□□□ 0.58
DDX23-210ENST00000551331 SMARCA4P51532 1647 aa18.63■□□□□ 0.57
DDX23-210ENST00000551331 KIF21AQ7Z4S6 1674 aa18.63■□□□□ 0.57
DDX23-210ENST00000551331 BAZ1BQ9UIG0 1483 aaKnown RBP18.56■□□□□ 0.56
DDX23-210ENST00000551331 PDS5BQ9NTI5 1447 aa18.52■□□□□ 0.56
DDX23-210ENST00000551331 PEG3Q9GZU2 1588 aa18.48■□□□□ 0.55
DDX23-210ENST00000551331 BAZ1AQ9NRL2 1556 aaPredicted RBP18.47■□□□□ 0.55
DDX23-210ENST00000551331 WDR62O43379 1518 aa18.44■□□□□ 0.54
DDX23-210ENST00000551331 MRC2Q9UBG0 1479 aa18.43■□□□□ 0.54
DDX23-210ENST00000551331 OSCARQ8IYS5 282 aa18.37■□□□□ 0.53
DDX23-210ENST00000551331 CADPSQ9ULU8 1353 aa18.34■□□□□ 0.53
DDX23-210ENST00000551331 RIMBP3CA6NJZ7 1639 aa18.27■□□□□ 0.51
DDX23-210ENST00000551331 RIMBP3BA6NNM3 1639 aa18.27■□□□□ 0.51
DDX23-210ENST00000551331 RIMBP3Q9UFD9 1639 aa18.27■□□□□ 0.51
DDX23-210ENST00000551331 MROH2BQ7Z745 1585 aa18.25■□□□□ 0.51
DDX23-210ENST00000551331 CEP164Q9UPV0 1460 aa18.2■□□□□ 0.5
DDX23-210ENST00000551331 FANCD2Q9BXW9 1451 aa18.14■□□□□ 0.49
DDX23-210ENST00000551331 ARHGEF11O15085 1522 aa18.13■□□□□ 0.49
DDX23-210ENST00000551331 URB2Q14146 1524 aaKnown RBP18.07■□□□□ 0.48
DDX23-210ENST00000551331 CFTRP13569 1480 aa18.01■□□□□ 0.47
DDX23-210ENST00000551331 WIZO95785 1651 aa17.99■□□□□ 0.47
DDX23-210ENST00000551331 CYB5RLQ6IPT4 315 aa17.98■□□□□ 0.47
DDX23-210ENST00000551331 TRHP20396 242 aaPredicted RBP17.96■□□□□ 0.47
DDX23-210ENST00000551331 ZNF608Q9ULD9 1512 aaPredicted RBP17.94■□□□□ 0.46
DDX23-210ENST00000551331 ARAP1Q96P48 1450 aa17.92■□□□□ 0.46
DDX23-210ENST00000551331 AEBP2Q6ZN18 517 aaPredicted RBP17.91■□□□□ 0.46
DDX23-210ENST00000551331 IFT140Q96RY7 1462 aa17.88■□□□□ 0.45
DDX23-210ENST00000551331 EIF4G3O43432 1585 aaKnown RBP17.8■□□□□ 0.44
DDX23-210ENST00000551331 CHD1O14646 1710 aa17.8■□□□□ 0.44
DDX23-210ENST00000551331 RSF1Q96T23 1441 aaPredicted RBP17.79■□□□□ 0.44
DDX23-210ENST00000551331 PRDM2Q13029 1718 aa17.77■□□□□ 0.44
DDX23-210ENST00000551331 TOPBP1Q92547 1522 aa17.73■□□□□ 0.43
DDX23-210ENST00000551331 TOP2AP11388 1531 aaKnown RBP17.71■□□□□ 0.43
DDX23-210ENST00000551331 AQRO60306 1485 aaKnown RBP eCLIP17.67■□□□□ 0.425e-7■■■■■ 36.6
DDX23-210ENST00000551331 TARBP1Q13395 1621 aaKnown RBP17.65■□□□□ 0.42
DDX23-210ENST00000551331 FBLN2P98095 1184 aa17.61■□□□□ 0.41
DDX23-210ENST00000551331 CLASP1Q7Z460 1538 aa17.61■□□□□ 0.41
DDX23-210ENST00000551331 ABCC8Q09428 1581 aa17.61■□□□□ 0.41
DDX23-210ENST00000551331 DNMBPQ6XZF7 1577 aa17.6■□□□□ 0.41
DDX23-210ENST00000551331 CCDC88BA6NC98 1476 aa17.51■□□□□ 0.39
DDX23-210ENST00000551331 POLA1P09884 1462 aaPredicted RBP17.51■□□□□ 0.39
DDX23-210ENST00000551331 SNAPC4Q5SXM2 1469 aa17.47■□□□□ 0.39
DDX23-210ENST00000551331 SYNJ1O43426 1573 aa17.47■□□□□ 0.39
DDX23-210ENST00000551331 RAD54L2Q9Y4B4 1467 aa17.44■□□□□ 0.38
DDX23-210ENST00000551331 TDRD9Q8NDG6 1382 aaKnown RBP17.44■□□□□ 0.38
DDX23-210ENST00000551331 GAPVD1Q14C86 1478 aa17.43■□□□□ 0.38
DDX23-210ENST00000551331 WDR97A6NE52 1622 aa17.39■□□□□ 0.38
DDX23-210ENST00000551331 MAGI1Q96QZ7 1491 aaPredicted RBP17.39■□□□□ 0.37
DDX23-210ENST00000551331 CHMP7Q8WUX9 453 aaPredicted RBP17.39■□□□□ 0.37
DDX23-210ENST00000551331 SOGA1O94964 1423 aa17.38■□□□□ 0.37
DDX23-210ENST00000551331 SYNJ2O15056 1496 aa17.35■□□□□ 0.37
DDX23-210ENST00000551331 GRIN2BQ13224 1484 aa17.32■□□□□ 0.36
DDX23-210ENST00000551331 ILDR1Q86SU0 546 aaPredicted RBP17.32■□□□□ 0.36
DDX23-210ENST00000551331 FGD5Q6ZNL6 1462 aa17.29■□□□□ 0.36
DDX23-210ENST00000551331 ERCC6L2Q5T890 1561 aa17.28■□□□□ 0.36
DDX23-210ENST00000551331 KIF13AQ9H1H9 1805 aa17.27■□□□□ 0.36
DDX23-210ENST00000551331 PBRM1Q86U86 1689 aa17.22■□□□□ 0.35
DDX23-210ENST00000551331 CUX1P39880 1505 aa17.19■□□□□ 0.34
DDX23-210ENST00000551331 KDM4FA0A1W2PPD8 638 aa17.17■□□□□ 0.34
DDX23-210ENST00000551331 CEP170Q5SW79 1584 aa17.16■□□□□ 0.34
DDX23-210ENST00000551331 SHROOM2Q13796 1616 aa17.12■□□□□ 0.33
DDX23-210ENST00000551331 ABCA5Q8WWZ7 1642 aa17.12■□□□□ 0.33
DDX23-210ENST00000551331 GRIN2AQ12879 1464 aa17.11■□□□□ 0.33
DDX23-210ENST00000551331 NUP160Q12769 1436 aa17.1■□□□□ 0.33
DDX23-210ENST00000551331 ABCA10Q8WWZ4 1543 aa17.06■□□□□ 0.32
DDX23-210ENST00000551331 ABCC10Q5T3U5 1492 aa17.06■□□□□ 0.32
DDX23-210ENST00000551331 ADAMTS12P58397 1594 aa17.02■□□□□ 0.32
DDX23-210ENST00000551331 FAM69CQ0P6D2 419 aa17.02■□□□□ 0.32
DDX23-210ENST00000551331 KDM6BO15054 1643 aa17.01■□□□□ 0.31
DDX23-210ENST00000551331 DIP2BQ9P265 1576 aa17.01■□□□□ 0.31
DDX23-210ENST00000551331 MAPKBP1O60336 1514 aa16.99■□□□□ 0.31
DDX23-210ENST00000551331 PRG4Q92954 1404 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms