RNA–Protein interactions for RNA: ENST00000551305.5

TMEM106C-216, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best)

Gene TMEM106C, Length 1,356 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-216ENST00000551305 NISCHQ9Y2I1 1504 aa37.31■■■■□ 3.56
TMEM106C-216ENST00000551305 ABCC9O60706 1549 aa33.75■■■□□ 2.99
TMEM106C-216ENST00000551305 CCDC180Q9P1Z9 1646 aa33.44■■■□□ 2.94
TMEM106C-216ENST00000551305 RB1CC1Q8TDY2 1594 aa31.96■■■□□ 2.71
TMEM106C-216ENST00000551305 DNAJC5BQ9UF47 199 aa31.89■■■□□ 2.7
TMEM106C-216ENST00000551305 DCAF8L2P0C7V8 631 aa31.72■■■□□ 2.67
TMEM106C-216ENST00000551305 NACADO15069 1562 aa31.7■■■□□ 2.67
TMEM106C-216ENST00000551305 PABPN1Q86U42 306 aaKnown RBP eCLIP31.48■■■□□ 2.63
TMEM106C-216ENST00000551305 UNC13AQ9UPW8 1703 aa31.24■■■□□ 2.59
TMEM106C-216ENST00000551305 MYO15BQ96JP2 1530 aa31.17■■■□□ 2.58
TMEM106C-216ENST00000551305 BICRAQ9NZM4 1560 aa31.08■■■□□ 2.57
TMEM106C-216ENST00000551305 ZCCHC6Q5VYS8 1495 aaKnown RBP30.88■■■□□ 2.53
TMEM106C-216ENST00000551305 DCAF1Q9Y4B6 1507 aa30.74■■■□□ 2.51
TMEM106C-216ENST00000551305 SCRIBQ14160 1630 aa30.58■■■□□ 2.49
TMEM106C-216ENST00000551305 SHROOM4Q9ULL8 1493 aa30.52■■■□□ 2.48
TMEM106C-216ENST00000551305 CC2D2AQ9P2K1 1620 aa30.43■■■□□ 2.46
TMEM106C-216ENST00000551305 CECR2Q9BXF3 1484 aa30.39■■■□□ 2.45
TMEM106C-216ENST00000551305 EIF4G1Q04637 1599 aaKnown RBP30.31■■■□□ 2.44
TMEM106C-216ENST00000551305 NCAPD3P42695 1498 aa29.31■■■□□ 2.28
TMEM106C-216ENST00000551305 DNAJC5Q9H3Z4 198 aa29.31■■■□□ 2.28
TMEM106C-216ENST00000551305 ATAD2BQ9ULI0 1458 aa29.22■■■□□ 2.27
TMEM106C-216ENST00000551305 SMARCA4P51532 1647 aa29.12■■■□□ 2.25
TMEM106C-216ENST00000551305 ERCC6Q03468 1493 aa29.11■■■□□ 2.25
TMEM106C-216ENST00000551305 SMARCA2P51531 1590 aa29.07■■■□□ 2.24
TMEM106C-216ENST00000551305 CUX2O14529 1486 aa29.06■■■□□ 2.24
TMEM106C-216ENST00000551305 HMGXB3Q12766 1538 aa29.02■■■□□ 2.24
TMEM106C-216ENST00000551305 NESP48681 1621 aa28.96■■■□□ 2.23
TMEM106C-216ENST00000551305 BAZ1AQ9NRL2 1556 aaPredicted RBP28.94■■■□□ 2.22
TMEM106C-216ENST00000551305 BAZ1BQ9UIG0 1483 aaKnown RBP28.91■■■□□ 2.22
TMEM106C-216ENST00000551305 PEG3Q9GZU2 1588 aa28.79■■■□□ 2.2
TMEM106C-216ENST00000551305 MROH2BQ7Z745 1585 aa28.79■■■□□ 2.2
TMEM106C-216ENST00000551305 LAMC3Q9Y6N6 1575 aa28.62■■■□□ 2.17
TMEM106C-216ENST00000551305 THOC2Q8NI27 1593 aaKnown RBP28.61■■■□□ 2.17
TMEM106C-216ENST00000551305 PDS5BQ9NTI5 1447 aa28.51■■■□□ 2.15
TMEM106C-216ENST00000551305 KIF21AQ7Z4S6 1674 aa28.5■■■□□ 2.15
TMEM106C-216ENST00000551305 CADPSQ9ULU8 1353 aa28.44■■■□□ 2.14
TMEM106C-216ENST00000551305 WIZO95785 1651 aa28.43■■■□□ 2.14
TMEM106C-216ENST00000551305 MRC2Q9UBG0 1479 aa28.27■■■□□ 2.12
TMEM106C-216ENST00000551305 WDR62O43379 1518 aa28.19■■■□□ 2.1
TMEM106C-216ENST00000551305 RSF1Q96T23 1441 aaPredicted RBP28.14■■■□□ 2.1
TMEM106C-216ENST00000551305 CEP164Q9UPV0 1460 aa28.12■■■□□ 2.09
TMEM106C-216ENST00000551305 FANCD2Q9BXW9 1451 aa28.11■■■□□ 2.09
TMEM106C-216ENST00000551305 CFTRP13569 1480 aa28.06■■■□□ 2.08
TMEM106C-216ENST00000551305 TRIM41Q8WV44 630 aa28.02■■■□□ 2.08
TMEM106C-216ENST00000551305 TOP2AP11388 1531 aaKnown RBP28.01■■■□□ 2.07
TMEM106C-216ENST00000551305 URB2Q14146 1524 aaKnown RBP27.9■■■□□ 2.06
TMEM106C-216ENST00000551305 OSCARQ8IYS5 282 aa27.8■■■□□ 2.04
TMEM106C-216ENST00000551305 CCDC88BA6NC98 1476 aa27.76■■■□□ 2.03
TMEM106C-216ENST00000551305 PRDM2Q13029 1718 aa27.65■■■□□ 2.02
TMEM106C-216ENST00000551305 ZNF608Q9ULD9 1512 aaPredicted RBP27.61■■■□□ 2.01
TMEM106C-216ENST00000551305 IFT140Q96RY7 1462 aa27.57■■■□□ 2
TMEM106C-216ENST00000551305 TOPBP1Q92547 1522 aa27.56■■■□□ 2
TMEM106C-216ENST00000551305 ABCC8Q09428 1581 aa27.43■■□□□ 1.98
TMEM106C-216ENST00000551305 RIMBP3CA6NJZ7 1639 aa27.4■■□□□ 1.98
TMEM106C-216ENST00000551305 RIMBP3BA6NNM3 1639 aa27.4■■□□□ 1.98
TMEM106C-216ENST00000551305 RIMBP3Q9UFD9 1639 aa27.4■■□□□ 1.98
TMEM106C-216ENST00000551305 DNMBPQ6XZF7 1577 aa27.4■■□□□ 1.98
TMEM106C-216ENST00000551305 EIF4G3O43432 1585 aaKnown RBP27.37■■□□□ 1.97
TMEM106C-216ENST00000551305 AQRO60306 1485 aaKnown RBP eCLIP27.35■■□□□ 1.976e-6■■■■□ 25.1
TMEM106C-216ENST00000551305 ARHGEF11O15085 1522 aa27.3■■□□□ 1.96
TMEM106C-216ENST00000551305 TARBP1Q13395 1621 aaKnown RBP27.29■■□□□ 1.96
TMEM106C-216ENST00000551305 POLA1P09884 1462 aaPredicted RBP27.27■■□□□ 1.96
TMEM106C-216ENST00000551305 RAD54L2Q9Y4B4 1467 aa27.24■■□□□ 1.95
TMEM106C-216ENST00000551305 FBLN2P98095 1184 aa27.23■■□□□ 1.95
TMEM106C-216ENST00000551305 CYB5RLQ6IPT4 315 aa27.21■■□□□ 1.95
TMEM106C-216ENST00000551305 CHD1O14646 1710 aa27.2■■□□□ 1.94
TMEM106C-216ENST00000551305 TDRD9Q8NDG6 1382 aaKnown RBP27.18■■□□□ 1.94
TMEM106C-216ENST00000551305 SOGA1O94964 1423 aa27.17■■□□□ 1.94
TMEM106C-216ENST00000551305 FGD5Q6ZNL6 1462 aa27.08■■□□□ 1.93
TMEM106C-216ENST00000551305 ARAP1Q96P48 1450 aa27.04■■□□□ 1.92
TMEM106C-216ENST00000551305 CUX1P39880 1505 aa27.04■■□□□ 1.92
TMEM106C-216ENST00000551305 SNAPC4Q5SXM2 1469 aa27.03■■□□□ 1.92
TMEM106C-216ENST00000551305 CHMP7Q8WUX9 453 aaPredicted RBP26.97■■□□□ 1.91
TMEM106C-216ENST00000551305 TRHP20396 242 aaPredicted RBP26.95■■□□□ 1.9
TMEM106C-216ENST00000551305 WDR97A6NE52 1622 aa26.92■■□□□ 1.9
TMEM106C-216ENST00000551305 GRIN2BQ13224 1484 aa26.91■■□□□ 1.9
TMEM106C-216ENST00000551305 MAGI1Q96QZ7 1491 aaPredicted RBP26.89■■□□□ 1.9
TMEM106C-216ENST00000551305 SUPT5HO00267 1087 aaKnown RBP26.89■■□□□ 1.9
TMEM106C-216ENST00000551305 CLASP1Q7Z460 1538 aa26.89■■□□□ 1.89
TMEM106C-216ENST00000551305 SYNJ1O43426 1573 aa26.84■■□□□ 1.89
TMEM106C-216ENST00000551305 SYNJ2O15056 1496 aa26.83■■□□□ 1.89
TMEM106C-216ENST00000551305 GAPVD1Q14C86 1478 aa26.81■■□□□ 1.88
TMEM106C-216ENST00000551305 PBRM1Q86U86 1689 aa26.75■■□□□ 1.87
TMEM106C-216ENST00000551305 ABCA10Q8WWZ4 1543 aa26.74■■□□□ 1.87
TMEM106C-216ENST00000551305 ABCA5Q8WWZ7 1642 aa26.69■■□□□ 1.86
TMEM106C-216ENST00000551305 WRNQ14191 1432 aaPredicted RBP eCLIP26.62■■□□□ 1.85
TMEM106C-216ENST00000551305 GRIN2AQ12879 1464 aa26.56■■□□□ 1.84
TMEM106C-216ENST00000551305 ERCC6L2Q5T890 1561 aa26.54■■□□□ 1.84
TMEM106C-216ENST00000551305 TOP2BQ02880 1626 aa26.52■■□□□ 1.84
TMEM106C-216ENST00000551305 ADAMTS12P58397 1594 aa26.51■■□□□ 1.83
TMEM106C-216ENST00000551305 BIVM-ERCC5R4GMW8 1640 aa26.5■■□□□ 1.83
TMEM106C-216ENST00000551305 CEP170Q5SW79 1584 aa26.49■■□□□ 1.83
TMEM106C-216ENST00000551305 NUP160Q12769 1436 aa26.48■■□□□ 1.83
TMEM106C-216ENST00000551305 FHAD1B1AJZ9 1412 aa26.46■■□□□ 1.83
TMEM106C-216ENST00000551305 ERICH3Q5RHP9 1530 aa26.37■■□□□ 1.81
TMEM106C-216ENST00000551305 SHROOM2Q13796 1616 aa26.34■■□□□ 1.81
TMEM106C-216ENST00000551305 JPH4Q96JJ6 628 aa26.29■■□□□ 1.8
TMEM106C-216ENST00000551305 PRG4Q92954 1404 aaPredicted RBP26.28■■□□□ 1.8
TMEM106C-216ENST00000551305 AEBP2Q6ZN18 517 aaPredicted RBP26.24■■□□□ 1.79
TMEM106C-216ENST00000551305 RUSC2Q8N2Y8 1516 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms