RNA–Protein interactions for RNA: ENST00000551301.1

SLC48A1-208, Transcript of solute carrier family 48 member 1, humanhuman

TSL 2

Gene SLC48A1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-208ENST00000551301 NISCHQ9Y2I1 1504 aa50.01■■■■■ 5.6
SLC48A1-208ENST00000551301 CCDC180Q9P1Z9 1646 aa44.74■■■■■ 4.75
SLC48A1-208ENST00000551301 ABCC9O60706 1549 aa44.35■■■■■ 4.69
SLC48A1-208ENST00000551301 RB1CC1Q8TDY2 1594 aa42.45■■■■■ 4.39
SLC48A1-208ENST00000551301 NACADO15069 1562 aa42.24■■■■■ 4.35
SLC48A1-208ENST00000551301 DCAF8L2P0C7V8 631 aa42.19■■■■■ 4.34
SLC48A1-208ENST00000551301 MYO15BQ96JP2 1530 aa41.76■■■■■ 4.28
SLC48A1-208ENST00000551301 ZCCHC6Q5VYS8 1495 aaKnown RBP41.5■■■■■ 4.23
SLC48A1-208ENST00000551301 PABPN1Q86U42 306 aaKnown RBP eCLIP41.36■■■■■ 4.21
SLC48A1-208ENST00000551301 DCAF1Q9Y4B6 1507 aa41.35■■■■■ 4.21
SLC48A1-208ENST00000551301 UNC13AQ9UPW8 1703 aa41.34■■■■■ 4.21
SLC48A1-208ENST00000551301 DNAJC5BQ9UF47 199 aa41.17■■■■■ 4.18
SLC48A1-208ENST00000551301 BICRAQ9NZM4 1560 aa41.04■■■■■ 4.16
SLC48A1-208ENST00000551301 SCRIBQ14160 1630 aa40.76■■■■■ 4.12
SLC48A1-208ENST00000551301 SHROOM4Q9ULL8 1493 aa40.7■■■■■ 4.11
SLC48A1-208ENST00000551301 EIF4G1Q04637 1599 aaKnown RBP40.09■■■■■ 4.01
SLC48A1-208ENST00000551301 CC2D2AQ9P2K1 1620 aa40.07■■■■■ 4.01
SLC48A1-208ENST00000551301 CECR2Q9BXF3 1484 aa39.95■■■■□ 3.99
SLC48A1-208ENST00000551301 NCAPD3P42695 1498 aa38.96■■■■□ 3.83
SLC48A1-208ENST00000551301 SMARCA4P51532 1647 aa38.92■■■■□ 3.82
SLC48A1-208ENST00000551301 ATAD2BQ9ULI0 1458 aa38.86■■■■□ 3.81
SLC48A1-208ENST00000551301 SMARCA2P51531 1590 aa38.86■■■■□ 3.81
SLC48A1-208ENST00000551301 BAZ1AQ9NRL2 1556 aaPredicted RBP38.85■■■■□ 3.81
SLC48A1-208ENST00000551301 HMGXB3Q12766 1538 aa38.7■■■■□ 3.79
SLC48A1-208ENST00000551301 BAZ1BQ9UIG0 1483 aaKnown RBP38.58■■■■□ 3.77
SLC48A1-208ENST00000551301 PEG3Q9GZU2 1588 aa38.53■■■■□ 3.76
SLC48A1-208ENST00000551301 MROH2BQ7Z745 1585 aa38.48■■■■□ 3.75
SLC48A1-208ENST00000551301 ERCC6Q03468 1493 aa38.38■■■■□ 3.73
SLC48A1-208ENST00000551301 NESP48681 1621 aa38.15■■■■□ 3.7
SLC48A1-208ENST00000551301 CUX2O14529 1486 aa38.13■■■■□ 3.69
SLC48A1-208ENST00000551301 LAMC3Q9Y6N6 1575 aa38.05■■■■□ 3.68
SLC48A1-208ENST00000551301 WIZO95785 1651 aa38.04■■■■□ 3.68
SLC48A1-208ENST00000551301 PDS5BQ9NTI5 1447 aa37.87■■■■□ 3.65
SLC48A1-208ENST00000551301 RSF1Q96T23 1441 aaPredicted RBP37.86■■■■□ 3.65
SLC48A1-208ENST00000551301 CADPSQ9ULU8 1353 aa37.81■■■■□ 3.64
SLC48A1-208ENST00000551301 KIF21AQ7Z4S6 1674 aa37.69■■■■□ 3.62
SLC48A1-208ENST00000551301 THOC2Q8NI27 1593 aaKnown RBP37.69■■■■□ 3.62
SLC48A1-208ENST00000551301 DNAJC5Q9H3Z4 198 aa37.68■■■■□ 3.62
SLC48A1-208ENST00000551301 TOP2AP11388 1531 aaKnown RBP37.65■■■■□ 3.62
SLC48A1-208ENST00000551301 MRC2Q9UBG0 1479 aa37.46■■■■□ 3.59
SLC48A1-208ENST00000551301 CFTRP13569 1480 aa37.43■■■■□ 3.58
SLC48A1-208ENST00000551301 CEP164Q9UPV0 1460 aa37.41■■■■□ 3.58
SLC48A1-208ENST00000551301 FANCD2Q9BXW9 1451 aa37.38■■■■□ 3.57
SLC48A1-208ENST00000551301 WDR62O43379 1518 aa37.31■■■■□ 3.56
SLC48A1-208ENST00000551301 CCDC88BA6NC98 1476 aa37.2■■■■□ 3.55
SLC48A1-208ENST00000551301 PRDM2Q13029 1718 aa37.09■■■■□ 3.53
SLC48A1-208ENST00000551301 URB2Q14146 1524 aaKnown RBP36.98■■■■□ 3.51
SLC48A1-208ENST00000551301 ABCC8Q09428 1581 aa36.75■■■■□ 3.47
SLC48A1-208ENST00000551301 TOPBP1Q92547 1522 aa36.69■■■■□ 3.46
SLC48A1-208ENST00000551301 IFT140Q96RY7 1462 aa36.65■■■■□ 3.46
SLC48A1-208ENST00000551301 DNMBPQ6XZF7 1577 aa36.61■■■■□ 3.45
SLC48A1-208ENST00000551301 SUPT5HO00267 1087 aaKnown RBP36.57■■■■□ 3.44
SLC48A1-208ENST00000551301 OSCARQ8IYS5 282 aa36.52■■■■□ 3.44
SLC48A1-208ENST00000551301 ZNF608Q9ULD9 1512 aaPredicted RBP36.45■■■■□ 3.43
SLC48A1-208ENST00000551301 POLA1P09884 1462 aaPredicted RBP36.32■■■■□ 3.41
SLC48A1-208ENST00000551301 EIF4G3O43432 1585 aaKnown RBP36.31■■■■□ 3.4
SLC48A1-208ENST00000551301 TARBP1Q13395 1621 aaKnown RBP36.29■■■■□ 3.4
SLC48A1-208ENST00000551301 SOGA1O94964 1423 aa36.24■■■■□ 3.39
SLC48A1-208ENST00000551301 TRIM41Q8WV44 630 aa36.22■■■■□ 3.39
SLC48A1-208ENST00000551301 AQRO60306 1485 aaKnown RBP eCLIP36.21■■■■□ 3.39
SLC48A1-208ENST00000551301 FGD5Q6ZNL6 1462 aa36.17■■■■□ 3.38
SLC48A1-208ENST00000551301 RAD54L2Q9Y4B4 1467 aa36.17■■■■□ 3.38
SLC48A1-208ENST00000551301 CUX1P39880 1505 aa36.15■■■■□ 3.38
SLC48A1-208ENST00000551301 TDRD9Q8NDG6 1382 aaKnown RBP36.08■■■■□ 3.37
SLC48A1-208ENST00000551301 WDR97A6NE52 1622 aa36.05■■■■□ 3.36
SLC48A1-208ENST00000551301 FBLN2P98095 1184 aa36.03■■■■□ 3.36
SLC48A1-208ENST00000551301 CHD1O14646 1710 aa35.96■■■■□ 3.35
SLC48A1-208ENST00000551301 GRIN2BQ13224 1484 aa35.88■■■■□ 3.33
SLC48A1-208ENST00000551301 RIMBP3CA6NJZ7 1639 aa35.86■■■■□ 3.33
SLC48A1-208ENST00000551301 RIMBP3BA6NNM3 1639 aa35.86■■■■□ 3.33
SLC48A1-208ENST00000551301 RIMBP3Q9UFD9 1639 aa35.86■■■■□ 3.33
SLC48A1-208ENST00000551301 SNAPC4Q5SXM2 1469 aa35.86■■■■□ 3.33
SLC48A1-208ENST00000551301 MAGI1Q96QZ7 1491 aaPredicted RBP35.85■■■■□ 3.33
SLC48A1-208ENST00000551301 CHMP7Q8WUX9 453 aaPredicted RBP35.83■■■■□ 3.33
SLC48A1-208ENST00000551301 ARHGEF11O15085 1522 aa35.82■■■■□ 3.32
SLC48A1-208ENST00000551301 WRNQ14191 1432 aaPredicted RBP eCLIP35.8■■■■□ 3.32
SLC48A1-208ENST00000551301 GAPVD1Q14C86 1478 aa35.79■■■■□ 3.32
SLC48A1-208ENST00000551301 ABCA10Q8WWZ4 1543 aa35.78■■■■□ 3.32
SLC48A1-208ENST00000551301 TOP2BQ02880 1626 aa35.72■■■■□ 3.31
SLC48A1-208ENST00000551301 SYNJ2O15056 1496 aa35.71■■■■□ 3.31
SLC48A1-208ENST00000551301 PBRM1Q86U86 1689 aa35.7■■■■□ 3.31
SLC48A1-208ENST00000551301 BIVM-ERCC5R4GMW8 1640 aa35.69■■■■□ 3.3
SLC48A1-208ENST00000551301 SYNJ1O43426 1573 aa35.67■■■■□ 3.3
SLC48A1-208ENST00000551301 ABCA5Q8WWZ7 1642 aa35.65■■■■□ 3.3
SLC48A1-208ENST00000551301 CYB5RLQ6IPT4 315 aa35.6■■■■□ 3.29
SLC48A1-208ENST00000551301 CLASP1Q7Z460 1538 aa35.54■■■■□ 3.28
SLC48A1-208ENST00000551301 ARAP1Q96P48 1450 aa35.46■■■■□ 3.27
SLC48A1-208ENST00000551301 GRIN2AQ12879 1464 aa35.39■■■■□ 3.26
SLC48A1-208ENST00000551301 ADAMTS12P58397 1594 aa35.38■■■■□ 3.25
SLC48A1-208ENST00000551301 ERICH3Q5RHP9 1530 aa35.37■■■■□ 3.25
SLC48A1-208ENST00000551301 FHAD1B1AJZ9 1412 aa35.37■■■■□ 3.25
SLC48A1-208ENST00000551301 NUP160Q12769 1436 aa35.23■■■■□ 3.23
SLC48A1-208ENST00000551301 CEP170Q5SW79 1584 aa35.17■■■■□ 3.22
SLC48A1-208ENST00000551301 TRHP20396 242 aaPredicted RBP35.16■■■■□ 3.22
SLC48A1-208ENST00000551301 KIF27Q86VH2 1401 aa35.12■■■■□ 3.21
SLC48A1-208ENST00000551301 SHROOM2Q13796 1616 aa35■■■■□ 3.19
SLC48A1-208ENST00000551301 IGF1RP08069 1367 aa34.98■■■■□ 3.19
SLC48A1-208ENST00000551301 ERCC6L2Q5T890 1561 aa34.96■■■■□ 3.19
SLC48A1-208ENST00000551301 CUL7Q14999 1698 aa34.95■■■■□ 3.18
SLC48A1-208ENST00000551301 JPH4Q96JJ6 628 aa34.94■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms