RNA–Protein interactions for RNA: ENST00000551272.5

LMBR1L-220, Transcript of limb development membrane protein 1 like, humanhuman

TSL 2

Gene LMBR1L, Length 472 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1L-220ENST00000551272 NISCHQ9Y2I1 1504 aa36.33■■■■□ 3.41
LMBR1L-220ENST00000551272 CCDC180Q9P1Z9 1646 aa32.46■■■□□ 2.79
LMBR1L-220ENST00000551272 ABCC9O60706 1549 aa32.11■■■□□ 2.73
LMBR1L-220ENST00000551272 RB1CC1Q8TDY2 1594 aa30.78■■■□□ 2.52
LMBR1L-220ENST00000551272 NACADO15069 1562 aa30.67■■■□□ 2.5
LMBR1L-220ENST00000551272 DCAF8L2P0C7V8 631 aa30.47■■■□□ 2.47
LMBR1L-220ENST00000551272 MYO15BQ96JP2 1530 aa30.44■■■□□ 2.46
LMBR1L-220ENST00000551272 ZCCHC6Q5VYS8 1495 aaKnown RBP30.15■■■□□ 2.42
LMBR1L-220ENST00000551272 DCAF1Q9Y4B6 1507 aa30.12■■■□□ 2.41
LMBR1L-220ENST00000551272 PABPN1Q86U42 306 aaKnown RBP eCLIP29.96■■■□□ 2.393e-9■■■■□ 19.9
LMBR1L-220ENST00000551272 UNC13AQ9UPW8 1703 aa29.94■■■□□ 2.38
LMBR1L-220ENST00000551272 DNAJC5BQ9UF47 199 aa29.92■■■□□ 2.38
LMBR1L-220ENST00000551272 BICRAQ9NZM4 1560 aa29.83■■■□□ 2.37
LMBR1L-220ENST00000551272 SHROOM4Q9ULL8 1493 aa29.61■■■□□ 2.33
LMBR1L-220ENST00000551272 SCRIBQ14160 1630 aa29.47■■■□□ 2.31
LMBR1L-220ENST00000551272 EIF4G1Q04637 1599 aaKnown RBP29.09■■■□□ 2.25
LMBR1L-220ENST00000551272 CC2D2AQ9P2K1 1620 aa29.04■■■□□ 2.24
LMBR1L-220ENST00000551272 CECR2Q9BXF3 1484 aa28.96■■■□□ 2.23
LMBR1L-220ENST00000551272 NCAPD3P42695 1498 aa28.35■■■□□ 2.13
LMBR1L-220ENST00000551272 ATAD2BQ9ULI0 1458 aa28.24■■■□□ 2.11
LMBR1L-220ENST00000551272 SMARCA4P51532 1647 aa28.23■■■□□ 2.11
LMBR1L-220ENST00000551272 SMARCA2P51531 1590 aa28.2■■■□□ 2.1
LMBR1L-220ENST00000551272 BAZ1AQ9NRL2 1556 aaPredicted RBP28.19■■■□□ 2.1
LMBR1L-220ENST00000551272 HMGXB3Q12766 1538 aa28.12■■■□□ 2.09
LMBR1L-220ENST00000551272 PEG3Q9GZU2 1588 aa28.04■■■□□ 2.08
LMBR1L-220ENST00000551272 BAZ1BQ9UIG0 1483 aaKnown RBP27.95■■■□□ 2.07
LMBR1L-220ENST00000551272 MROH2BQ7Z745 1585 aa27.94■■■□□ 2.06
LMBR1L-220ENST00000551272 ERCC6Q03468 1493 aa27.75■■■□□ 2.03
LMBR1L-220ENST00000551272 CUX2O14529 1486 aa27.69■■■□□ 2.02
LMBR1L-220ENST00000551272 NESP48681 1621 aa27.66■■■□□ 2.02
LMBR1L-220ENST00000551272 LAMC3Q9Y6N6 1575 aa27.61■■■□□ 2.01
LMBR1L-220ENST00000551272 WIZO95785 1651 aa27.56■■■□□ 2
LMBR1L-220ENST00000551272 RSF1Q96T23 1441 aaPredicted RBP27.52■■■□□ 2
LMBR1L-220ENST00000551272 PDS5BQ9NTI5 1447 aa27.49■■□□□ 1.99
LMBR1L-220ENST00000551272 CADPSQ9ULU8 1353 aa27.48■■□□□ 1.99
LMBR1L-220ENST00000551272 DNAJC5Q9H3Z4 198 aa27.38■■□□□ 1.97
LMBR1L-220ENST00000551272 THOC2Q8NI27 1593 aaKnown RBP27.34■■□□□ 1.97
LMBR1L-220ENST00000551272 TOP2AP11388 1531 aaKnown RBP27.31■■□□□ 1.96
LMBR1L-220ENST00000551272 KIF21AQ7Z4S6 1674 aa27.27■■□□□ 1.96
LMBR1L-220ENST00000551272 CFTRP13569 1480 aa27.22■■□□□ 1.95
LMBR1L-220ENST00000551272 MRC2Q9UBG0 1479 aa27.17■■□□□ 1.94
LMBR1L-220ENST00000551272 FANCD2Q9BXW9 1451 aa27.11■■□□□ 1.93
LMBR1L-220ENST00000551272 CEP164Q9UPV0 1460 aa27.11■■□□□ 1.93
LMBR1L-220ENST00000551272 WDR62O43379 1518 aa27.09■■□□□ 1.93
LMBR1L-220ENST00000551272 CCDC88BA6NC98 1476 aa27■■□□□ 1.91
LMBR1L-220ENST00000551272 PRDM2Q13029 1718 aa26.84■■□□□ 1.89
LMBR1L-220ENST00000551272 URB2Q14146 1524 aaKnown RBP26.84■■□□□ 1.89
LMBR1L-220ENST00000551272 ABCC8Q09428 1581 aa26.69■■□□□ 1.86
LMBR1L-220ENST00000551272 TOPBP1Q92547 1522 aa26.61■■□□□ 1.85
LMBR1L-220ENST00000551272 IFT140Q96RY7 1462 aa26.6■■□□□ 1.85
LMBR1L-220ENST00000551272 DNMBPQ6XZF7 1577 aa26.54■■□□□ 1.84
LMBR1L-220ENST00000551272 OSCARQ8IYS5 282 aa26.5■■□□□ 1.83
LMBR1L-220ENST00000551272 ZNF608Q9ULD9 1512 aaPredicted RBP26.44■■□□□ 1.82
LMBR1L-220ENST00000551272 SUPT5HO00267 1087 aaKnown RBP26.42■■□□□ 1.82
LMBR1L-220ENST00000551272 POLA1P09884 1462 aaPredicted RBP26.36■■□□□ 1.81
LMBR1L-220ENST00000551272 TARBP1Q13395 1621 aaKnown RBP26.35■■□□□ 1.81
LMBR1L-220ENST00000551272 EIF4G3O43432 1585 aaKnown RBP26.29■■□□□ 1.8
LMBR1L-220ENST00000551272 SOGA1O94964 1423 aa26.28■■□□□ 1.8
LMBR1L-220ENST00000551272 AQRO60306 1485 aaKnown RBP eCLIP26.26■■□□□ 1.79
LMBR1L-220ENST00000551272 CUX1P39880 1505 aa26.23■■□□□ 1.79
LMBR1L-220ENST00000551272 FGD5Q6ZNL6 1462 aa26.22■■□□□ 1.79
LMBR1L-220ENST00000551272 RAD54L2Q9Y4B4 1467 aa26.22■■□□□ 1.79
LMBR1L-220ENST00000551272 WDR97A6NE52 1622 aa26.2■■□□□ 1.78
LMBR1L-220ENST00000551272 TDRD9Q8NDG6 1382 aaKnown RBP26.16■■□□□ 1.78
LMBR1L-220ENST00000551272 TRIM41Q8WV44 630 aa26.14■■□□□ 1.78
LMBR1L-220ENST00000551272 GRIN2BQ13224 1484 aa26.03■■□□□ 1.76
LMBR1L-220ENST00000551272 FBLN2P98095 1184 aa26.02■■□□□ 1.76
LMBR1L-220ENST00000551272 MAGI1Q96QZ7 1491 aaPredicted RBP26.01■■□□□ 1.75
LMBR1L-220ENST00000551272 CHD1O14646 1710 aa26■■□□□ 1.75
LMBR1L-220ENST00000551272 ABCA10Q8WWZ4 1543 aa25.99■■□□□ 1.75
LMBR1L-220ENST00000551272 SNAPC4Q5SXM2 1469 aa25.98■■□□□ 1.75
LMBR1L-220ENST00000551272 RIMBP3CA6NJZ7 1639 aa25.97■■□□□ 1.75
LMBR1L-220ENST00000551272 RIMBP3BA6NNM3 1639 aa25.97■■□□□ 1.75
LMBR1L-220ENST00000551272 RIMBP3Q9UFD9 1639 aa25.97■■□□□ 1.75
LMBR1L-220ENST00000551272 ARHGEF11O15085 1522 aa25.97■■□□□ 1.75
LMBR1L-220ENST00000551272 WRNQ14191 1432 aaPredicted RBP eCLIP25.97■■□□□ 1.75
LMBR1L-220ENST00000551272 GAPVD1Q14C86 1478 aa25.96■■□□□ 1.75
LMBR1L-220ENST00000551272 CHMP7Q8WUX9 453 aaPredicted RBP25.95■■□□□ 1.74
LMBR1L-220ENST00000551272 TOP2BQ02880 1626 aa25.92■■□□□ 1.74
LMBR1L-220ENST00000551272 SYNJ2O15056 1496 aa25.91■■□□□ 1.74
LMBR1L-220ENST00000551272 BIVM-ERCC5R4GMW8 1640 aa25.89■■□□□ 1.74
LMBR1L-220ENST00000551272 ABCA5Q8WWZ7 1642 aa25.87■■□□□ 1.73
LMBR1L-220ENST00000551272 SYNJ1O43426 1573 aa25.82■■□□□ 1.72
LMBR1L-220ENST00000551272 PBRM1Q86U86 1689 aa25.81■■□□□ 1.72
LMBR1L-220ENST00000551272 CLASP1Q7Z460 1538 aa25.8■■□□□ 1.72
LMBR1L-220ENST00000551272 CYB5RLQ6IPT4 315 aa25.78■■□□□ 1.72
LMBR1L-220ENST00000551272 ARAP1Q96P48 1450 aa25.72■■□□□ 1.71
LMBR1L-220ENST00000551272 ERICH3Q5RHP9 1530 aa25.68■■□□□ 1.7
LMBR1L-220ENST00000551272 GRIN2AQ12879 1464 aa25.67■■□□□ 1.7
LMBR1L-220ENST00000551272 FHAD1B1AJZ9 1412 aa25.67■■□□□ 1.7
LMBR1L-220ENST00000551272 ADAMTS12P58397 1594 aa25.64■■□□□ 1.69
LMBR1L-220ENST00000551272 NUP160Q12769 1436 aa25.61■■□□□ 1.69
LMBR1L-220ENST00000551272 CEP170Q5SW79 1584 aa25.5■■□□□ 1.67
LMBR1L-220ENST00000551272 KIF27Q86VH2 1401 aa25.47■■□□□ 1.67
LMBR1L-220ENST00000551272 IGF1RP08069 1367 aa25.44■■□□□ 1.66
LMBR1L-220ENST00000551272 SHROOM2Q13796 1616 aa25.41■■□□□ 1.66
LMBR1L-220ENST00000551272 TRHP20396 242 aaPredicted RBP25.38■■□□□ 1.65
LMBR1L-220ENST00000551272 JPH4Q96JJ6 628 aa25.37■■□□□ 1.65
LMBR1L-220ENST00000551272 ERCC6L2Q5T890 1561 aa25.34■■□□□ 1.65
LMBR1L-220ENST00000551272 CUL7Q14999 1698 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms