RNA–Protein interactions for RNA: ENST00000551243.1

RND1-204, Transcript of Rho family GTPase 1, humanhuman

TSL 3

Gene RND1, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RND1-204ENST00000551243 NISCHQ9Y2I1 1504 aa29.49■■■□□ 2.31
RND1-204ENST00000551243 ABCC9O60706 1549 aa27.28■■□□□ 1.96
RND1-204ENST00000551243 CCDC180Q9P1Z9 1646 aa26.78■■□□□ 1.88
RND1-204ENST00000551243 DNAJC5BQ9UF47 199 aa26.03■■□□□ 1.76
RND1-204ENST00000551243 RB1CC1Q8TDY2 1594 aa25.78■■□□□ 1.72
RND1-204ENST00000551243 NACADO15069 1562 aa25.47■■□□□ 1.67
RND1-204ENST00000551243 PABPN1Q86U42 306 aaKnown RBP eCLIP25.24■■□□□ 1.63
RND1-204ENST00000551243 DCAF8L2P0C7V8 631 aa25.07■■□□□ 1.6
RND1-204ENST00000551243 UNC13AQ9UPW8 1703 aa25.03■■□□□ 1.6
RND1-204ENST00000551243 BICRAQ9NZM4 1560 aa24.97■■□□□ 1.59
RND1-204ENST00000551243 MYO15BQ96JP2 1530 aa24.96■■□□□ 1.59
RND1-204ENST00000551243 SHROOM4Q9ULL8 1493 aa24.77■■□□□ 1.56
RND1-204ENST00000551243 CECR2Q9BXF3 1484 aa24.69■■□□□ 1.54
RND1-204ENST00000551243 CC2D2AQ9P2K1 1620 aa24.63■■□□□ 1.53
RND1-204ENST00000551243 DNAJC5Q9H3Z4 198 aa24.46■■□□□ 1.51
RND1-204ENST00000551243 EIF4G1Q04637 1599 aaKnown RBP24.46■■□□□ 1.51
RND1-204ENST00000551243 DCAF1Q9Y4B6 1507 aa24.39■■□□□ 1.49
RND1-204ENST00000551243 ZCCHC6Q5VYS8 1495 aaKnown RBP24.33■■□□□ 1.49
RND1-204ENST00000551243 SCRIBQ14160 1630 aa24.27■■□□□ 1.48
RND1-204ENST00000551243 CUX2O14529 1486 aa23.87■■□□□ 1.41
RND1-204ENST00000551243 ERCC6Q03468 1493 aa23.68■■□□□ 1.38
RND1-204ENST00000551243 NCAPD3P42695 1498 aa23.5■■□□□ 1.35
RND1-204ENST00000551243 ATAD2BQ9ULI0 1458 aa23.31■■□□□ 1.32
RND1-204ENST00000551243 HMGXB3Q12766 1538 aa23.31■■□□□ 1.32
RND1-204ENST00000551243 SMARCA2P51531 1590 aa23.27■■□□□ 1.32
RND1-204ENST00000551243 NESP48681 1621 aa23.22■■□□□ 1.31
RND1-204ENST00000551243 THOC2Q8NI27 1593 aaKnown RBP23.18■■□□□ 1.3
RND1-204ENST00000551243 SMARCA4P51532 1647 aa23.13■■□□□ 1.29
RND1-204ENST00000551243 TRIM41Q8WV44 630 aa23.11■■□□□ 1.29
RND1-204ENST00000551243 BAZ1BQ9UIG0 1483 aaKnown RBP23.09■■□□□ 1.29
RND1-204ENST00000551243 LAMC3Q9Y6N6 1575 aa23.09■■□□□ 1.29
RND1-204ENST00000551243 PDS5BQ9NTI5 1447 aa22.99■■□□□ 1.27
RND1-204ENST00000551243 BAZ1AQ9NRL2 1556 aaPredicted RBP22.97■■□□□ 1.27
RND1-204ENST00000551243 PEG3Q9GZU2 1588 aa22.96■■□□□ 1.27
RND1-204ENST00000551243 KIF21AQ7Z4S6 1674 aa22.91■■□□□ 1.26
RND1-204ENST00000551243 MRC2Q9UBG0 1479 aa22.8■■□□□ 1.24
RND1-204ENST00000551243 WDR62O43379 1518 aa22.77■■□□□ 1.24
RND1-204ENST00000551243 CADPSQ9ULU8 1353 aa22.75■■□□□ 1.23
RND1-204ENST00000551243 MROH2BQ7Z745 1585 aa22.67■■□□□ 1.22
RND1-204ENST00000551243 OSCARQ8IYS5 282 aa22.62■■□□□ 1.21
RND1-204ENST00000551243 CEP164Q9UPV0 1460 aa22.6■■□□□ 1.21
RND1-204ENST00000551243 FANCD2Q9BXW9 1451 aa22.48■■□□□ 1.19
RND1-204ENST00000551243 CFTRP13569 1480 aa22.37■■□□□ 1.17
RND1-204ENST00000551243 RIMBP3CA6NJZ7 1639 aa22.35■■□□□ 1.17
RND1-204ENST00000551243 RIMBP3BA6NNM3 1639 aa22.35■■□□□ 1.17
RND1-204ENST00000551243 RIMBP3Q9UFD9 1639 aa22.35■■□□□ 1.17
RND1-204ENST00000551243 WIZO95785 1651 aa22.33■■□□□ 1.17
RND1-204ENST00000551243 URB2Q14146 1524 aaKnown RBP22.3■■□□□ 1.16
RND1-204ENST00000551243 ARHGEF11O15085 1522 aa22.26■■□□□ 1.15
RND1-204ENST00000551243 IFT140Q96RY7 1462 aa22.17■■□□□ 1.14
RND1-204ENST00000551243 TOP2AP11388 1531 aaKnown RBP22.11■■□□□ 1.13
RND1-204ENST00000551243 ZNF608Q9ULD9 1512 aaPredicted RBP22.11■■□□□ 1.13
RND1-204ENST00000551243 CYB5RLQ6IPT4 315 aa22.08■■□□□ 1.13
RND1-204ENST00000551243 TRHP20396 242 aaPredicted RBP22.07■■□□□ 1.12
RND1-204ENST00000551243 PRDM2Q13029 1718 aa22.04■■□□□ 1.12
RND1-204ENST00000551243 EIF4G3O43432 1585 aaKnown RBP22■■□□□ 1.11
RND1-204ENST00000551243 RSF1Q96T23 1441 aaPredicted RBP21.99■■□□□ 1.11
RND1-204ENST00000551243 ARAP1Q96P48 1450 aa21.98■■□□□ 1.11
RND1-204ENST00000551243 TOPBP1Q92547 1522 aa21.98■■□□□ 1.11
RND1-204ENST00000551243 ABCC8Q09428 1581 aa21.97■■□□□ 1.11
RND1-204ENST00000551243 AEBP2Q6ZN18 517 aaPredicted RBP21.92■■□□□ 1.1
RND1-204ENST00000551243 CHD1O14646 1710 aa21.89■■□□□ 1.09
RND1-204ENST00000551243 DNMBPQ6XZF7 1577 aa21.87■■□□□ 1.09
RND1-204ENST00000551243 AQRO60306 1485 aaKnown RBP eCLIP21.83■■□□□ 1.09
RND1-204ENST00000551243 FBLN2P98095 1184 aa21.82■■□□□ 1.08
RND1-204ENST00000551243 TARBP1Q13395 1621 aaKnown RBP21.8■■□□□ 1.08
RND1-204ENST00000551243 CCDC88BA6NC98 1476 aa21.8■■□□□ 1.08
RND1-204ENST00000551243 POLA1P09884 1462 aaPredicted RBP21.72■■□□□ 1.07
RND1-204ENST00000551243 CLASP1Q7Z460 1538 aa21.69■■□□□ 1.06
RND1-204ENST00000551243 WDR97A6NE52 1622 aa21.66■■□□□ 1.06
RND1-204ENST00000551243 SYNJ1O43426 1573 aa21.66■■□□□ 1.06
RND1-204ENST00000551243 SNAPC4Q5SXM2 1469 aa21.64■■□□□ 1.05
RND1-204ENST00000551243 MAGI1Q96QZ7 1491 aaPredicted RBP21.61■■□□□ 1.05
RND1-204ENST00000551243 TDRD9Q8NDG6 1382 aaKnown RBP21.61■■□□□ 1.05
RND1-204ENST00000551243 CHMP7Q8WUX9 453 aaPredicted RBP21.6■■□□□ 1.05
RND1-204ENST00000551243 SOGA1O94964 1423 aa21.6■■□□□ 1.05
RND1-204ENST00000551243 RAD54L2Q9Y4B4 1467 aa21.59■■□□□ 1.05
RND1-204ENST00000551243 SYNJ2O15056 1496 aa21.53■■□□□ 1.04
RND1-204ENST00000551243 GRIN2BQ13224 1484 aa21.52■■□□□ 1.04
RND1-204ENST00000551243 GAPVD1Q14C86 1478 aa21.52■■□□□ 1.03
RND1-204ENST00000551243 FGD5Q6ZNL6 1462 aa21.49■■□□□ 1.03
RND1-204ENST00000551243 CUX1P39880 1505 aa21.34■■□□□ 1.01
RND1-204ENST00000551243 SUPT5HO00267 1087 aaKnown RBP21.33■■□□□ 1.01
RND1-204ENST00000551243 PBRM1Q86U86 1689 aa21.33■■□□□ 1
RND1-204ENST00000551243 ABCA10Q8WWZ4 1543 aa21.24■□□□□ 0.99
RND1-204ENST00000551243 ABCA5Q8WWZ7 1642 aa21.24■□□□□ 0.99
RND1-204ENST00000551243 GRIN2AQ12879 1464 aa21.24■□□□□ 0.99
RND1-204ENST00000551243 ERCC6L2Q5T890 1561 aa21.22■□□□□ 0.99
RND1-204ENST00000551243 CEP170Q5SW79 1584 aa21.21■□□□□ 0.99
RND1-204ENST00000551243 NUP160Q12769 1436 aa21.2■□□□□ 0.98
RND1-204ENST00000551243 SHROOM2Q13796 1616 aa21.15■□□□□ 0.98
RND1-204ENST00000551243 ADAMTS12P58397 1594 aa21.14■□□□□ 0.97
RND1-204ENST00000551243 KIF13AQ9H1H9 1805 aa21.13■□□□□ 0.97
RND1-204ENST00000551243 FHAD1B1AJZ9 1412 aa21.07■□□□□ 0.96
RND1-204ENST00000551243 WRNQ14191 1432 aaPredicted RBP eCLIP21.05■□□□□ 0.96
RND1-204ENST00000551243 ABCC10Q5T3U5 1492 aa21.05■□□□□ 0.96
RND1-204ENST00000551243 FAM69CQ0P6D2 419 aa21.01■□□□□ 0.95
RND1-204ENST00000551243 PRG4Q92954 1404 aaPredicted RBP21.01■□□□□ 0.95
RND1-204ENST00000551243 MAPKBP1O60336 1514 aa21■□□□□ 0.95
RND1-204ENST00000551243 NPM1P06748 294 aaKnown RBP eCLIP20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms