RNA–Protein interactions for RNA: ENST00000551230.1

SLC8B1-212, Transcript of solute carrier family 8 member B1, humanhuman

TSL 4

Gene SLC8B1, Length 549 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC8B1-212ENST00000551230 NISCHQ9Y2I1 1504 aa44.78■■■■■ 4.76
SLC8B1-212ENST00000551230 CCDC180Q9P1Z9 1646 aa40.06■■■■■ 4
SLC8B1-212ENST00000551230 ABCC9O60706 1549 aa39.66■■■■□ 3.94
SLC8B1-212ENST00000551230 RB1CC1Q8TDY2 1594 aa37.85■■■■□ 3.65
SLC8B1-212ENST00000551230 NACADO15069 1562 aa37.68■■■■□ 3.62
SLC8B1-212ENST00000551230 DCAF8L2P0C7V8 631 aa37.46■■■■□ 3.59
SLC8B1-212ENST00000551230 UNC13AQ9UPW8 1703 aa37.28■■■■□ 3.56
SLC8B1-212ENST00000551230 MYO15BQ96JP2 1530 aa37.25■■■■□ 3.55
SLC8B1-212ENST00000551230 ZCCHC6Q5VYS8 1495 aaKnown RBP37.24■■■■□ 3.55
SLC8B1-212ENST00000551230 DCAF1Q9Y4B6 1507 aa36.95■■■■□ 3.51
SLC8B1-212ENST00000551230 PABPN1Q86U42 306 aaKnown RBP eCLIP36.93■■■■□ 3.5
SLC8B1-212ENST00000551230 BICRAQ9NZM4 1560 aa36.9■■■■□ 3.5
SLC8B1-212ENST00000551230 DNAJC5BQ9UF47 199 aa36.86■■■■□ 3.49
SLC8B1-212ENST00000551230 SCRIBQ14160 1630 aa36.59■■■■□ 3.45
SLC8B1-212ENST00000551230 SHROOM4Q9ULL8 1493 aa36.21■■■■□ 3.39
SLC8B1-212ENST00000551230 EIF4G1Q04637 1599 aaKnown RBP35.88■■■■□ 3.33
SLC8B1-212ENST00000551230 CC2D2AQ9P2K1 1620 aa35.87■■■■□ 3.33
SLC8B1-212ENST00000551230 CECR2Q9BXF3 1484 aa35.63■■■■□ 3.29
SLC8B1-212ENST00000551230 SMARCA4P51532 1647 aa34.92■■■■□ 3.18
SLC8B1-212ENST00000551230 ATAD2BQ9ULI0 1458 aa34.77■■■■□ 3.16
SLC8B1-212ENST00000551230 NCAPD3P42695 1498 aa34.75■■■■□ 3.15
SLC8B1-212ENST00000551230 BAZ1AQ9NRL2 1556 aaPredicted RBP34.7■■■■□ 3.14
SLC8B1-212ENST00000551230 SMARCA2P51531 1590 aa34.65■■■■□ 3.14
SLC8B1-212ENST00000551230 HMGXB3Q12766 1538 aa34.6■■■■□ 3.13
SLC8B1-212ENST00000551230 MROH2BQ7Z745 1585 aa34.58■■■■□ 3.13
SLC8B1-212ENST00000551230 PEG3Q9GZU2 1588 aa34.52■■■■□ 3.12
SLC8B1-212ENST00000551230 BAZ1BQ9UIG0 1483 aaKnown RBP34.43■■■■□ 3.1
SLC8B1-212ENST00000551230 NESP48681 1621 aa34.25■■■■□ 3.07
SLC8B1-212ENST00000551230 WIZO95785 1651 aa34.24■■■■□ 3.07
SLC8B1-212ENST00000551230 ERCC6Q03468 1493 aa34.11■■■■□ 3.05
SLC8B1-212ENST00000551230 LAMC3Q9Y6N6 1575 aa33.95■■■■□ 3.03
SLC8B1-212ENST00000551230 RSF1Q96T23 1441 aaPredicted RBP33.93■■■■□ 3.02
SLC8B1-212ENST00000551230 CUX2O14529 1486 aa33.91■■■■□ 3.02
SLC8B1-212ENST00000551230 KIF21AQ7Z4S6 1674 aa33.9■■■■□ 3.02
SLC8B1-212ENST00000551230 THOC2Q8NI27 1593 aaKnown RBP33.85■■■■□ 3.01
SLC8B1-212ENST00000551230 TOP2AP11388 1531 aaKnown RBP33.74■■■□□ 2.99
SLC8B1-212ENST00000551230 CADPSQ9ULU8 1353 aa33.69■■■□□ 2.98
SLC8B1-212ENST00000551230 PDS5BQ9NTI5 1447 aa33.63■■■□□ 2.97
SLC8B1-212ENST00000551230 CFTRP13569 1480 aa33.44■■■□□ 2.94
SLC8B1-212ENST00000551230 MRC2Q9UBG0 1479 aa33.44■■■□□ 2.94
SLC8B1-212ENST00000551230 DNAJC5Q9H3Z4 198 aa33.39■■■□□ 2.94
SLC8B1-212ENST00000551230 WDR62O43379 1518 aa33.38■■■□□ 2.93
SLC8B1-212ENST00000551230 FANCD2Q9BXW9 1451 aa33.38■■■□□ 2.93
SLC8B1-212ENST00000551230 CEP164Q9UPV0 1460 aa33.37■■■□□ 2.93
SLC8B1-212ENST00000551230 PRDM2Q13029 1718 aa33.33■■■□□ 2.93
SLC8B1-212ENST00000551230 CCDC88BA6NC98 1476 aa33.33■■■□□ 2.93
SLC8B1-212ENST00000551230 URB2Q14146 1524 aaKnown RBP33.17■■■□□ 2.9
SLC8B1-212ENST00000551230 TOPBP1Q92547 1522 aa32.83■■■□□ 2.85
SLC8B1-212ENST00000551230 DNMBPQ6XZF7 1577 aa32.75■■■□□ 2.83
SLC8B1-212ENST00000551230 ZNF608Q9ULD9 1512 aaPredicted RBP32.7■■■□□ 2.83
SLC8B1-212ENST00000551230 IFT140Q96RY7 1462 aa32.66■■■□□ 2.82
SLC8B1-212ENST00000551230 SUPT5HO00267 1087 aaKnown RBP32.65■■■□□ 2.82
SLC8B1-212ENST00000551230 ABCC8Q09428 1581 aa32.62■■■□□ 2.81
SLC8B1-212ENST00000551230 TARBP1Q13395 1621 aaKnown RBP32.59■■■□□ 2.81
SLC8B1-212ENST00000551230 EIF4G3O43432 1585 aaKnown RBP32.57■■■□□ 2.8
SLC8B1-212ENST00000551230 POLA1P09884 1462 aaPredicted RBP32.53■■■□□ 2.8
SLC8B1-212ENST00000551230 CUX1P39880 1505 aa32.46■■■□□ 2.79
SLC8B1-212ENST00000551230 RAD54L2Q9Y4B4 1467 aa32.42■■■□□ 2.78
SLC8B1-212ENST00000551230 FGD5Q6ZNL6 1462 aa32.39■■■□□ 2.78
SLC8B1-212ENST00000551230 AQRO60306 1485 aaKnown RBP eCLIP32.38■■■□□ 2.777e-7■■■■■ 34.7
SLC8B1-212ENST00000551230 OSCARQ8IYS5 282 aa32.31■■■□□ 2.76
SLC8B1-212ENST00000551230 CHD1O14646 1710 aa32.31■■■□□ 2.76
SLC8B1-212ENST00000551230 SOGA1O94964 1423 aa32.28■■■□□ 2.76
SLC8B1-212ENST00000551230 WDR97A6NE52 1622 aa32.27■■■□□ 2.76
SLC8B1-212ENST00000551230 TDRD9Q8NDG6 1382 aaKnown RBP32.22■■■□□ 2.75
SLC8B1-212ENST00000551230 TRIM41Q8WV44 630 aa32.14■■■□□ 2.74
SLC8B1-212ENST00000551230 RIMBP3CA6NJZ7 1639 aa32.12■■■□□ 2.73
SLC8B1-212ENST00000551230 RIMBP3BA6NNM3 1639 aa32.12■■■□□ 2.73
SLC8B1-212ENST00000551230 RIMBP3Q9UFD9 1639 aa32.12■■■□□ 2.73
SLC8B1-212ENST00000551230 SNAPC4Q5SXM2 1469 aa32.09■■■□□ 2.73
SLC8B1-212ENST00000551230 SYNJ1O43426 1573 aa32.08■■■□□ 2.73
SLC8B1-212ENST00000551230 PBRM1Q86U86 1689 aa32.08■■■□□ 2.73
SLC8B1-212ENST00000551230 BIVM-ERCC5R4GMW8 1640 aa32.07■■■□□ 2.72
SLC8B1-212ENST00000551230 TOP2BQ02880 1626 aa32.02■■■□□ 2.72
SLC8B1-212ENST00000551230 ABCA5Q8WWZ7 1642 aa32.02■■■□□ 2.72
SLC8B1-212ENST00000551230 ARHGEF11O15085 1522 aa32■■■□□ 2.71
SLC8B1-212ENST00000551230 ABCA10Q8WWZ4 1543 aa32■■■□□ 2.71
SLC8B1-212ENST00000551230 GRIN2BQ13224 1484 aa31.98■■■□□ 2.71
SLC8B1-212ENST00000551230 FBLN2P98095 1184 aa31.96■■■□□ 2.71
SLC8B1-212ENST00000551230 WRNQ14191 1432 aaPredicted RBP eCLIP31.96■■■□□ 2.71
SLC8B1-212ENST00000551230 MAGI1Q96QZ7 1491 aaPredicted RBP31.94■■■□□ 2.7
SLC8B1-212ENST00000551230 GAPVD1Q14C86 1478 aa31.93■■■□□ 2.7
SLC8B1-212ENST00000551230 CLASP1Q7Z460 1538 aa31.86■■■□□ 2.69
SLC8B1-212ENST00000551230 SYNJ2O15056 1496 aa31.84■■■□□ 2.69
SLC8B1-212ENST00000551230 CHMP7Q8WUX9 453 aaPredicted RBP31.76■■■□□ 2.67
SLC8B1-212ENST00000551230 ARAP1Q96P48 1450 aa31.75■■■□□ 2.67
SLC8B1-212ENST00000551230 ADAMTS12P58397 1594 aa31.75■■■□□ 2.67
SLC8B1-212ENST00000551230 GRIN2AQ12879 1464 aa31.62■■■□□ 2.65
SLC8B1-212ENST00000551230 CYB5RLQ6IPT4 315 aa31.6■■■□□ 2.65
SLC8B1-212ENST00000551230 CEP170Q5SW79 1584 aa31.59■■■□□ 2.65
SLC8B1-212ENST00000551230 ERICH3Q5RHP9 1530 aa31.59■■■□□ 2.65
SLC8B1-212ENST00000551230 FHAD1B1AJZ9 1412 aa31.51■■■□□ 2.64
SLC8B1-212ENST00000551230 NUP160Q12769 1436 aa31.49■■■□□ 2.63
SLC8B1-212ENST00000551230 ERCC6L2Q5T890 1561 aa31.48■■■□□ 2.63
SLC8B1-212ENST00000551230 SHROOM2Q13796 1616 aa31.4■■■□□ 2.62
SLC8B1-212ENST00000551230 RUSC2Q8N2Y8 1516 aa31.3■■■□□ 2.6
SLC8B1-212ENST00000551230 KIF27Q86VH2 1401 aa31.26■■■□□ 2.6
SLC8B1-212ENST00000551230 CUL7Q14999 1698 aa31.25■■■□□ 2.59
SLC8B1-212ENST00000551230 IGF1RP08069 1367 aa31.24■■■□□ 2.59
SLC8B1-212ENST00000551230 PRG4Q92954 1404 aaPredicted RBP31.12■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms