RNA–Protein interactions for RNA: ENST00000551050.6

PRICKLE1-206, Transcript of prickle planar cell polarity protein 1, humanhuman

TSL 5

Gene PRICKLE1, Length 712 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-206ENST00000551050 NISCHQ9Y2I1 1504 aa48.16■■■■■ 5.3
PRICKLE1-206ENST00000551050 CCDC180Q9P1Z9 1646 aa43.1■■■■■ 4.49
PRICKLE1-206ENST00000551050 ABCC9O60706 1549 aa42.91■■■■■ 4.46
PRICKLE1-206ENST00000551050 RB1CC1Q8TDY2 1594 aa40.95■■■■■ 4.15
PRICKLE1-206ENST00000551050 NACADO15069 1562 aa40.76■■■■■ 4.12
PRICKLE1-206ENST00000551050 MYO15BQ96JP2 1530 aa40.38■■■■■ 4.06
PRICKLE1-206ENST00000551050 DCAF8L2P0C7V8 631 aa40.36■■■■■ 4.05
PRICKLE1-206ENST00000551050 DNAJC5BQ9UF47 199 aa40.21■■■■■ 4.03
PRICKLE1-206ENST00000551050 ZCCHC6Q5VYS8 1495 aaKnown RBP39.97■■■■□ 3.99
PRICKLE1-206ENST00000551050 PABPN1Q86U42 306 aaKnown RBP eCLIP39.97■■■■□ 3.99
PRICKLE1-206ENST00000551050 UNC13AQ9UPW8 1703 aa39.9■■■■□ 3.98
PRICKLE1-206ENST00000551050 DCAF1Q9Y4B6 1507 aa39.88■■■■□ 3.97
PRICKLE1-206ENST00000551050 BICRAQ9NZM4 1560 aa39.8■■■■□ 3.96
PRICKLE1-206ENST00000551050 SHROOM4Q9ULL8 1493 aa39.39■■■■□ 3.9
PRICKLE1-206ENST00000551050 SCRIBQ14160 1630 aa39.19■■■■□ 3.86
PRICKLE1-206ENST00000551050 EIF4G1Q04637 1599 aaKnown RBP38.78■■■■□ 3.8
PRICKLE1-206ENST00000551050 CC2D2AQ9P2K1 1620 aa38.78■■■■□ 3.8
PRICKLE1-206ENST00000551050 CECR2Q9BXF3 1484 aa38.69■■■■□ 3.78
PRICKLE1-206ENST00000551050 NCAPD3P42695 1498 aa37.69■■■■□ 3.62
PRICKLE1-206ENST00000551050 ATAD2BQ9ULI0 1458 aa37.55■■■■□ 3.6
PRICKLE1-206ENST00000551050 SMARCA4P51532 1647 aa37.48■■■■□ 3.59
PRICKLE1-206ENST00000551050 SMARCA2P51531 1590 aa37.42■■■■□ 3.58
PRICKLE1-206ENST00000551050 HMGXB3Q12766 1538 aa37.38■■■■□ 3.57
PRICKLE1-206ENST00000551050 BAZ1AQ9NRL2 1556 aaPredicted RBP37.35■■■■□ 3.57
PRICKLE1-206ENST00000551050 PEG3Q9GZU2 1588 aa37.23■■■■□ 3.55
PRICKLE1-206ENST00000551050 BAZ1BQ9UIG0 1483 aaKnown RBP37.13■■■■□ 3.53
PRICKLE1-206ENST00000551050 MROH2BQ7Z745 1585 aa37.08■■■■□ 3.53
PRICKLE1-206ENST00000551050 CUX2O14529 1486 aa37.02■■■■□ 3.52
PRICKLE1-206ENST00000551050 ERCC6Q03468 1493 aa37.01■■■■□ 3.52
PRICKLE1-206ENST00000551050 NESP48681 1621 aa36.92■■■■□ 3.5
PRICKLE1-206ENST00000551050 DNAJC5Q9H3Z4 198 aa36.83■■■■□ 3.49
PRICKLE1-206ENST00000551050 LAMC3Q9Y6N6 1575 aa36.74■■■■□ 3.47
PRICKLE1-206ENST00000551050 WIZO95785 1651 aa36.67■■■■□ 3.46
PRICKLE1-206ENST00000551050 THOC2Q8NI27 1593 aaKnown RBP36.54■■■■□ 3.44
PRICKLE1-206ENST00000551050 PDS5BQ9NTI5 1447 aa36.53■■■■□ 3.44
PRICKLE1-206ENST00000551050 RSF1Q96T23 1441 aaPredicted RBP36.52■■■■□ 3.44
PRICKLE1-206ENST00000551050 CADPSQ9ULU8 1353 aa36.52■■■■□ 3.44
PRICKLE1-206ENST00000551050 KIF21AQ7Z4S6 1674 aa36.36■■■■□ 3.41
PRICKLE1-206ENST00000551050 TOP2AP11388 1531 aaKnown RBP36.22■■■■□ 3.39
PRICKLE1-206ENST00000551050 MRC2Q9UBG0 1479 aa36.19■■■■□ 3.38
PRICKLE1-206ENST00000551050 CFTRP13569 1480 aa36.15■■■■□ 3.38
PRICKLE1-206ENST00000551050 WDR62O43379 1518 aa36.13■■■■□ 3.37
PRICKLE1-206ENST00000551050 CEP164Q9UPV0 1460 aa36.05■■■■□ 3.36
PRICKLE1-206ENST00000551050 FANCD2Q9BXW9 1451 aa36.05■■■■□ 3.36
PRICKLE1-206ENST00000551050 CCDC88BA6NC98 1476 aa35.79■■■■□ 3.32
PRICKLE1-206ENST00000551050 URB2Q14146 1524 aaKnown RBP35.75■■■■□ 3.31
PRICKLE1-206ENST00000551050 SUPT5HO00267 1087 aaKnown RBP35.63■■■■□ 3.29
PRICKLE1-206ENST00000551050 PRDM2Q13029 1718 aa35.59■■■■□ 3.29
PRICKLE1-206ENST00000551050 TOPBP1Q92547 1522 aa35.38■■■■□ 3.25
PRICKLE1-206ENST00000551050 IFT140Q96RY7 1462 aa35.38■■■■□ 3.25
PRICKLE1-206ENST00000551050 ABCC8Q09428 1581 aa35.35■■■■□ 3.25
PRICKLE1-206ENST00000551050 OSCARQ8IYS5 282 aa35.31■■■■□ 3.24
PRICKLE1-206ENST00000551050 ZNF608Q9ULD9 1512 aaPredicted RBP35.27■■■■□ 3.24
PRICKLE1-206ENST00000551050 DNMBPQ6XZF7 1577 aa35.25■■■■□ 3.23
PRICKLE1-206ENST00000551050 TRIM41Q8WV44 630 aa35.09■■■■□ 3.21
PRICKLE1-206ENST00000551050 TARBP1Q13395 1621 aaKnown RBP35.06■■■■□ 3.2
PRICKLE1-206ENST00000551050 POLA1P09884 1462 aaPredicted RBP35.05■■■■□ 3.2
PRICKLE1-206ENST00000551050 EIF4G3O43432 1585 aaKnown RBP35.04■■■■□ 3.2
PRICKLE1-206ENST00000551050 AQRO60306 1485 aaKnown RBP eCLIP34.96■■■■□ 3.19
PRICKLE1-206ENST00000551050 RAD54L2Q9Y4B4 1467 aa34.87■■■■□ 3.17
PRICKLE1-206ENST00000551050 SOGA1O94964 1423 aa34.86■■■■□ 3.17
PRICKLE1-206ENST00000551050 CUX1P39880 1505 aa34.82■■■■□ 3.16
PRICKLE1-206ENST00000551050 FGD5Q6ZNL6 1462 aa34.81■■■■□ 3.16
PRICKLE1-206ENST00000551050 RIMBP3CA6NJZ7 1639 aa34.77■■■■□ 3.16
PRICKLE1-206ENST00000551050 RIMBP3BA6NNM3 1639 aa34.77■■■■□ 3.16
PRICKLE1-206ENST00000551050 RIMBP3Q9UFD9 1639 aa34.77■■■■□ 3.16
PRICKLE1-206ENST00000551050 WDR97A6NE52 1622 aa34.77■■■■□ 3.16
PRICKLE1-206ENST00000551050 TDRD9Q8NDG6 1382 aaKnown RBP34.75■■■■□ 3.15
PRICKLE1-206ENST00000551050 ARHGEF11O15085 1522 aa34.74■■■■□ 3.15
PRICKLE1-206ENST00000551050 CHD1O14646 1710 aa34.66■■■■□ 3.14
PRICKLE1-206ENST00000551050 SNAPC4Q5SXM2 1469 aa34.6■■■■□ 3.13
PRICKLE1-206ENST00000551050 FBLN2P98095 1184 aa34.58■■■■□ 3.13
PRICKLE1-206ENST00000551050 GRIN2BQ13224 1484 aa34.57■■■■□ 3.12
PRICKLE1-206ENST00000551050 MAGI1Q96QZ7 1491 aaPredicted RBP34.57■■■■□ 3.12
PRICKLE1-206ENST00000551050 ABCA10Q8WWZ4 1543 aa34.5■■■■□ 3.11
PRICKLE1-206ENST00000551050 WRNQ14191 1432 aaPredicted RBP eCLIP34.47■■■■□ 3.11
PRICKLE1-206ENST00000551050 GAPVD1Q14C86 1478 aa34.45■■■■□ 3.1
PRICKLE1-206ENST00000551050 CHMP7Q8WUX9 453 aaPredicted RBP34.44■■■■□ 3.1
PRICKLE1-206ENST00000551050 SYNJ2O15056 1496 aa34.44■■■■□ 3.1
PRICKLE1-206ENST00000551050 CLASP1Q7Z460 1538 aa34.44■■■■□ 3.1
PRICKLE1-206ENST00000551050 SYNJ1O43426 1573 aa34.43■■■■□ 3.1
PRICKLE1-206ENST00000551050 BIVM-ERCC5R4GMW8 1640 aa34.43■■■■□ 3.1
PRICKLE1-206ENST00000551050 ARAP1Q96P48 1450 aa34.42■■■■□ 3.1
PRICKLE1-206ENST00000551050 TOP2BQ02880 1626 aa34.41■■■■□ 3.1
PRICKLE1-206ENST00000551050 CYB5RLQ6IPT4 315 aa34.41■■■■□ 3.1
PRICKLE1-206ENST00000551050 ABCA5Q8WWZ7 1642 aa34.38■■■■□ 3.09
PRICKLE1-206ENST00000551050 PBRM1Q86U86 1689 aa34.3■■■■□ 3.08
PRICKLE1-206ENST00000551050 GRIN2AQ12879 1464 aa34.12■■■■□ 3.05
PRICKLE1-206ENST00000551050 ADAMTS12P58397 1594 aa34.09■■■■□ 3.05
PRICKLE1-206ENST00000551050 NUP160Q12769 1436 aa34.06■■■■□ 3.04
PRICKLE1-206ENST00000551050 FHAD1B1AJZ9 1412 aa34.05■■■■□ 3.04
PRICKLE1-206ENST00000551050 ERICH3Q5RHP9 1530 aa34.04■■■■□ 3.04
PRICKLE1-206ENST00000551050 CEP170Q5SW79 1584 aa33.96■■■■□ 3.03
PRICKLE1-206ENST00000551050 TRHP20396 242 aaPredicted RBP33.9■■■■□ 3.02
PRICKLE1-206ENST00000551050 ERCC6L2Q5T890 1561 aa33.85■■■■□ 3.01
PRICKLE1-206ENST00000551050 SHROOM2Q13796 1616 aa33.83■■■■□ 3.01
PRICKLE1-206ENST00000551050 KIF27Q86VH2 1401 aa33.74■■■□□ 2.99
PRICKLE1-206ENST00000551050 IGF1RP08069 1367 aa33.67■■■□□ 2.98
PRICKLE1-206ENST00000551050 JPH4Q96JJ6 628 aa33.65■■■□□ 2.98
PRICKLE1-206ENST00000551050 PRG4Q92954 1404 aaPredicted RBP33.63■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms