RNA–Protein interactions for RNA: ENST00000551018.5

PFDN5-214, Transcript of prefoldin subunit 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN5, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-214ENST00000551018 AEBP2Q6ZN18 517 aaPredicted RBP21.02■□□□□ 0.96
PFDN5-214ENST00000551018 NISCHQ9Y2I1 1504 aa20.15■□□□□ 0.82
PFDN5-214ENST00000551018 CHIC1Q5VXU3 224 aa19.71■□□□□ 0.75
PFDN5-214ENST00000551018 ABCC9O60706 1549 aa18.31■□□□□ 0.52
PFDN5-214ENST00000551018 CCDC180Q9P1Z9 1646 aa18.07■□□□□ 0.48
PFDN5-214ENST00000551018 SENP3Q9H4L4 574 aaPredicted RBP17.96■□□□□ 0.47
PFDN5-214ENST00000551018 PHF23Q9BUL5 403 aaPredicted RBP17.67■□□□□ 0.42
PFDN5-214ENST00000551018 RB1CC1Q8TDY2 1594 aa17.28■□□□□ 0.36
PFDN5-214ENST00000551018 DNAJC5BQ9UF47 199 aa17.24■□□□□ 0.35
PFDN5-214ENST00000551018 DCAF8L2P0C7V8 631 aa17.2■□□□□ 0.34
PFDN5-214ENST00000551018 NACADO15069 1562 aa17.11■□□□□ 0.33
PFDN5-214ENST00000551018 PABPN1Q86U42 306 aaKnown RBP eCLIP17.06■□□□□ 0.32
PFDN5-214ENST00000551018 UNC13AQ9UPW8 1703 aa16.9■□□□□ 0.3
PFDN5-214ENST00000551018 BICRAQ9NZM4 1560 aa16.81■□□□□ 0.28
PFDN5-214ENST00000551018 MYO15BQ96JP2 1530 aa16.77■□□□□ 0.28
PFDN5-214ENST00000551018 FOXD1Q16676 465 aa16.77■□□□□ 0.28
PFDN5-214ENST00000551018 ZCCHC6Q5VYS8 1495 aaKnown RBP16.68■□□□□ 0.26
PFDN5-214ENST00000551018 SCRIBQ14160 1630 aa16.59■□□□□ 0.25
PFDN5-214ENST00000551018 DCAF1Q9Y4B6 1507 aa16.55■□□□□ 0.24
PFDN5-214ENST00000551018 CC2D2AQ9P2K1 1620 aa16.48■□□□□ 0.23
PFDN5-214ENST00000551018 CECR2Q9BXF3 1484 aa16.46■□□□□ 0.23
PFDN5-214ENST00000551018 SHROOM4Q9ULL8 1493 aa16.46■□□□□ 0.23
PFDN5-214ENST00000551018 EIF4G1Q04637 1599 aaKnown RBP16.41■□□□□ 0.22
PFDN5-214ENST00000551018 POTEDQ86YR6 584 aa15.89■□□□□ 0.13
PFDN5-214ENST00000551018 DNAJC5Q9H3Z4 198 aa15.83■□□□□ 0.12
PFDN5-214ENST00000551018 MSH5O43196 834 aa15.81■□□□□ 0.12
PFDN5-214ENST00000551018 ERCC6Q03468 1493 aa15.81■□□□□ 0.12
PFDN5-214ENST00000551018 NCAPD3P42695 1498 aa15.8■□□□□ 0.12
PFDN5-214ENST00000551018 ATAD2BQ9ULI0 1458 aa15.78■□□□□ 0.12
PFDN5-214ENST00000551018 SMARCA4P51532 1647 aa15.76■□□□□ 0.11
PFDN5-214ENST00000551018 SMARCA2P51531 1590 aa15.71■□□□□ 0.11
PFDN5-214ENST00000551018 NESP48681 1621 aa15.71■□□□□ 0.11
PFDN5-214ENST00000551018 CUX2O14529 1486 aa15.71■□□□□ 0.1
PFDN5-214ENST00000551018 HMGXB3Q12766 1538 aa15.68■□□□□ 0.1
PFDN5-214ENST00000551018 BAZ1BQ9UIG0 1483 aaKnown RBP15.65■□□□□ 0.1
PFDN5-214ENST00000551018 BAZ1AQ9NRL2 1556 aaPredicted RBP15.64■□□□□ 0.09
PFDN5-214ENST00000551018 PLPPR3Q6T4P5 718 aa15.59■□□□□ 0.09
PFDN5-214ENST00000551018 MROH2BQ7Z745 1585 aa15.58■□□□□ 0.08
PFDN5-214ENST00000551018 PIAS4Q8N2W9 510 aaPredicted RBP15.55■□□□□ 0.08
PFDN5-214ENST00000551018 PEG3Q9GZU2 1588 aa15.53■□□□□ 0.08
PFDN5-214ENST00000551018 THOC2Q8NI27 1593 aaKnown RBP15.49■□□□□ 0.07
PFDN5-214ENST00000551018 LAMC3Q9Y6N6 1575 aa15.47■□□□□ 0.07
PFDN5-214ENST00000551018 PPP6R1Q9UPN7 881 aa15.46■□□□□ 0.07
PFDN5-214ENST00000551018 KIF21AQ7Z4S6 1674 aa15.45■□□□□ 0.06
PFDN5-214ENST00000551018 PDS5BQ9NTI5 1447 aa15.41■□□□□ 0.06
PFDN5-214ENST00000551018 WIZO95785 1651 aa15.39■□□□□ 0.05
PFDN5-214ENST00000551018 CADPSQ9ULU8 1353 aa15.36■□□□□ 0.05
PFDN5-214ENST00000551018 ADRA2BP18089 450 aa15.35■□□□□ 0.05
PFDN5-214ENST00000551018 MRC2Q9UBG0 1479 aa15.31■□□□□ 0.04
PFDN5-214ENST00000551018 WDR62O43379 1518 aa15.24■□□□□ 0.03
PFDN5-214ENST00000551018 TRIM41Q8WV44 630 aa15.24■□□□□ 0.03
PFDN5-214ENST00000551018 CEP164Q9UPV0 1460 aa15.23■□□□□ 0.03
PFDN5-214ENST00000551018 FANCD2Q9BXW9 1451 aa15.21■□□□□ 0.03
PFDN5-214ENST00000551018 RSF1Q96T23 1441 aaPredicted RBP15.2■□□□□ 0.02
PFDN5-214ENST00000551018 TOP2AP11388 1531 aaKnown RBP15.15■□□□□ 0.02
PFDN5-214ENST00000551018 CFTRP13569 1480 aa15.14■□□□□ 0.01
PFDN5-214ENST00000551018 URB2Q14146 1524 aaKnown RBP15.11■□□□□ 0.01
PFDN5-214ENST00000551018 OSCARQ8IYS5 282 aa15.01□□□□□ -0.01
PFDN5-214ENST00000551018 CCDC88BA6NC98 1476 aa15□□□□□ -0.01
PFDN5-214ENST00000551018 ZNF608Q9ULD9 1512 aaPredicted RBP14.96□□□□□ -0.02
PFDN5-214ENST00000551018 PRDM2Q13029 1718 aa14.95□□□□□ -0.02
PFDN5-214ENST00000551018 TOPBP1Q92547 1522 aa14.91□□□□□ -0.02
PFDN5-214ENST00000551018 IFT140Q96RY7 1462 aa14.9□□□□□ -0.02
PFDN5-214ENST00000551018 RIMBP3CA6NJZ7 1639 aa14.85□□□□□ -0.03
PFDN5-214ENST00000551018 RIMBP3BA6NNM3 1639 aa14.85□□□□□ -0.03
PFDN5-214ENST00000551018 RIMBP3Q9UFD9 1639 aa14.85□□□□□ -0.03
PFDN5-214ENST00000551018 EIF4G3O43432 1585 aaKnown RBP14.85□□□□□ -0.03
PFDN5-214ENST00000551018 DNMBPQ6XZF7 1577 aa14.83□□□□□ -0.04
PFDN5-214ENST00000551018 AQRO60306 1485 aaKnown RBP eCLIP14.81□□□□□ -0.046e-7■■■■■ 32.7
PFDN5-214ENST00000551018 ARHGEF11O15085 1522 aa14.8□□□□□ -0.04
PFDN5-214ENST00000551018 FBLN2P98095 1184 aa14.79□□□□□ -0.04
PFDN5-214ENST00000551018 ABCC8Q09428 1581 aa14.79□□□□□ -0.04
PFDN5-214ENST00000551018 TARBP1Q13395 1621 aaKnown RBP14.76□□□□□ -0.05
PFDN5-214ENST00000551018 POLA1P09884 1462 aaPredicted RBP14.76□□□□□ -0.05
PFDN5-214ENST00000551018 RAD54L2Q9Y4B4 1467 aa14.75□□□□□ -0.05
PFDN5-214ENST00000551018 CHD1O14646 1710 aa14.75□□□□□ -0.05
PFDN5-214ENST00000551018 CYB5RLQ6IPT4 315 aa14.73□□□□□ -0.05
PFDN5-214ENST00000551018 TDRD9Q8NDG6 1382 aaKnown RBP14.72□□□□□ -0.05
PFDN5-214ENST00000551018 SOGA1O94964 1423 aa14.68□□□□□ -0.06
PFDN5-214ENST00000551018 FGD5Q6ZNL6 1462 aa14.67□□□□□ -0.06
PFDN5-214ENST00000551018 ARAP1Q96P48 1450 aa14.66□□□□□ -0.06
PFDN5-214ENST00000551018 SNAPC4Q5SXM2 1469 aa14.65□□□□□ -0.06
PFDN5-214ENST00000551018 CUX1P39880 1505 aa14.64□□□□□ -0.07
PFDN5-214ENST00000551018 TRHP20396 242 aaPredicted RBP14.63□□□□□ -0.07
PFDN5-214ENST00000551018 CHMP7Q8WUX9 453 aaPredicted RBP14.6□□□□□ -0.07
PFDN5-214ENST00000551018 SUPT5HO00267 1087 aaKnown RBP14.58□□□□□ -0.08
PFDN5-214ENST00000551018 GRIN2BQ13224 1484 aa14.56□□□□□ -0.08
PFDN5-214ENST00000551018 CLASP1Q7Z460 1538 aa14.55□□□□□ -0.08
PFDN5-214ENST00000551018 MAGI1Q96QZ7 1491 aaPredicted RBP14.54□□□□□ -0.08
PFDN5-214ENST00000551018 SYNJ1O43426 1573 aa14.53□□□□□ -0.08
PFDN5-214ENST00000551018 WDR97A6NE52 1622 aa14.52□□□□□ -0.09
PFDN5-214ENST00000551018 SYNJ2O15056 1496 aa14.51□□□□□ -0.09
PFDN5-214ENST00000551018 GAPVD1Q14C86 1478 aa14.5□□□□□ -0.09
PFDN5-214ENST00000551018 PBRM1Q86U86 1689 aa14.49□□□□□ -0.09
PFDN5-214ENST00000551018 ABCA10Q8WWZ4 1543 aa14.44□□□□□ -0.1
PFDN5-214ENST00000551018 ABCA5Q8WWZ7 1642 aa14.44□□□□□ -0.1
PFDN5-214ENST00000551018 WRNQ14191 1432 aaPredicted RBP eCLIP14.4□□□□□ -0.13e-8■□□□□ 9.6
PFDN5-214ENST00000551018 ERCC6L2Q5T890 1561 aa14.39□□□□□ -0.11
PFDN5-214ENST00000551018 GRIN2AQ12879 1464 aa14.38□□□□□ -0.11
PFDN5-214ENST00000551018 ADAMTS12P58397 1594 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms