RNA–Protein interactions for RNA: ENST00000550962.5

CEP290-205, Transcript of centrosomal protein 290, humanhuman

TSL 3

Gene CEP290, Length 697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-205ENST00000550962 NISCHQ9Y2I1 1504 aa32.4■■■□□ 2.78
CEP290-205ENST00000550962 CCDC180Q9P1Z9 1646 aa28.92■■■□□ 2.22
CEP290-205ENST00000550962 ABCC9O60706 1549 aa28.36■■■□□ 2.13
CEP290-205ENST00000550962 RB1CC1Q8TDY2 1594 aa27.31■■□□□ 1.96
CEP290-205ENST00000550962 NACADO15069 1562 aa27.23■■□□□ 1.95
CEP290-205ENST00000550962 DCAF8L2P0C7V8 631 aa27.15■■□□□ 1.94
CEP290-205ENST00000550962 MYO15BQ96JP2 1530 aa27.03■■□□□ 1.92
CEP290-205ENST00000550962 ZCCHC6Q5VYS8 1495 aaKnown RBP26.96■■□□□ 1.91
CEP290-205ENST00000550962 DCAF1Q9Y4B6 1507 aa26.85■■□□□ 1.89
CEP290-205ENST00000550962 UNC13AQ9UPW8 1703 aa26.53■■□□□ 1.84
CEP290-205ENST00000550962 PABPN1Q86U42 306 aaKnown RBP eCLIP26.45■■□□□ 1.82
CEP290-205ENST00000550962 BICRAQ9NZM4 1560 aa26.35■■□□□ 1.81
CEP290-205ENST00000550962 SCRIBQ14160 1630 aa26.32■■□□□ 1.8
CEP290-205ENST00000550962 SHROOM4Q9ULL8 1493 aa26.26■■□□□ 1.79
CEP290-205ENST00000550962 DNAJC5BQ9UF47 199 aa26.03■■□□□ 1.76
CEP290-205ENST00000550962 EIF4G1Q04637 1599 aaKnown RBP25.73■■□□□ 1.71
CEP290-205ENST00000550962 CC2D2AQ9P2K1 1620 aa25.65■■□□□ 1.7
CEP290-205ENST00000550962 CECR2Q9BXF3 1484 aa25.54■■□□□ 1.68
CEP290-205ENST00000550962 BAZ1AQ9NRL2 1556 aaPredicted RBP25.18■■□□□ 1.62
CEP290-205ENST00000550962 SMARCA4P51532 1647 aa25.17■■□□□ 1.62
CEP290-205ENST00000550962 SMARCA2P51531 1590 aa25.11■■□□□ 1.61
CEP290-205ENST00000550962 NCAPD3P42695 1498 aa25.09■■□□□ 1.61
CEP290-205ENST00000550962 ATAD2BQ9ULI0 1458 aa25.06■■□□□ 1.6
CEP290-205ENST00000550962 HMGXB3Q12766 1538 aa24.99■■□□□ 1.59
CEP290-205ENST00000550962 PEG3Q9GZU2 1588 aa24.93■■□□□ 1.58
CEP290-205ENST00000550962 MROH2BQ7Z745 1585 aa24.92■■□□□ 1.58
CEP290-205ENST00000550962 BAZ1BQ9UIG0 1483 aaKnown RBP24.9■■□□□ 1.58
CEP290-205ENST00000550962 WIZO95785 1651 aa24.64■■□□□ 1.53
CEP290-205ENST00000550962 RSF1Q96T23 1441 aaPredicted RBP24.61■■□□□ 1.53
CEP290-205ENST00000550962 ERCC6Q03468 1493 aa24.57■■□□□ 1.52
CEP290-205ENST00000550962 LAMC3Q9Y6N6 1575 aa24.5■■□□□ 1.51
CEP290-205ENST00000550962 NESP48681 1621 aa24.45■■□□□ 1.5
CEP290-205ENST00000550962 TOP2AP11388 1531 aaKnown RBP24.45■■□□□ 1.5
CEP290-205ENST00000550962 PDS5BQ9NTI5 1447 aa24.37■■□□□ 1.49
CEP290-205ENST00000550962 CADPSQ9ULU8 1353 aa24.37■■□□□ 1.49
CEP290-205ENST00000550962 CUX2O14529 1486 aa24.34■■□□□ 1.49
CEP290-205ENST00000550962 KIF21AQ7Z4S6 1674 aa24.18■■□□□ 1.46
CEP290-205ENST00000550962 CFTRP13569 1480 aa24.18■■□□□ 1.46
CEP290-205ENST00000550962 THOC2Q8NI27 1593 aaKnown RBP24.16■■□□□ 1.46
CEP290-205ENST00000550962 CCDC88BA6NC98 1476 aa24.11■■□□□ 1.45
CEP290-205ENST00000550962 CEP164Q9UPV0 1460 aa24.11■■□□□ 1.45
CEP290-205ENST00000550962 FANCD2Q9BXW9 1451 aa24.08■■□□□ 1.45
CEP290-205ENST00000550962 MRC2Q9UBG0 1479 aa24.08■■□□□ 1.45
CEP290-205ENST00000550962 PRDM2Q13029 1718 aa23.99■■□□□ 1.43
CEP290-205ENST00000550962 WDR62O43379 1518 aa23.98■■□□□ 1.43
CEP290-205ENST00000550962 AEBP2Q6ZN18 517 aaPredicted RBP23.91■■□□□ 1.42
CEP290-205ENST00000550962 SUPT5HO00267 1087 aaKnown RBP23.9■■□□□ 1.42
CEP290-205ENST00000550962 URB2Q14146 1524 aaKnown RBP23.79■■□□□ 1.4
CEP290-205ENST00000550962 ABCC8Q09428 1581 aa23.76■■□□□ 1.39
CEP290-205ENST00000550962 DNAJC5Q9H3Z4 198 aa23.68■■□□□ 1.38
CEP290-205ENST00000550962 TOPBP1Q92547 1522 aa23.66■■□□□ 1.38
CEP290-205ENST00000550962 DNMBPQ6XZF7 1577 aa23.65■■□□□ 1.38
CEP290-205ENST00000550962 IFT140Q96RY7 1462 aa23.61■■□□□ 1.37
CEP290-205ENST00000550962 POLA1P09884 1462 aaPredicted RBP23.45■■□□□ 1.34
CEP290-205ENST00000550962 CUX1P39880 1505 aa23.4■■□□□ 1.34
CEP290-205ENST00000550962 ZNF608Q9ULD9 1512 aaPredicted RBP23.4■■□□□ 1.34
CEP290-205ENST00000550962 FGD5Q6ZNL6 1462 aa23.38■■□□□ 1.33
CEP290-205ENST00000550962 TARBP1Q13395 1621 aaKnown RBP23.38■■□□□ 1.33
CEP290-205ENST00000550962 SOGA1O94964 1423 aa23.38■■□□□ 1.33
CEP290-205ENST00000550962 EIF4G3O43432 1585 aaKnown RBP23.36■■□□□ 1.33
CEP290-205ENST00000550962 WDR97A6NE52 1622 aa23.33■■□□□ 1.32
CEP290-205ENST00000550962 RAD54L2Q9Y4B4 1467 aa23.3■■□□□ 1.32
CEP290-205ENST00000550962 OSCARQ8IYS5 282 aa23.3■■□□□ 1.32
CEP290-205ENST00000550962 WRNQ14191 1432 aaPredicted RBP eCLIP23.27■■□□□ 1.32
CEP290-205ENST00000550962 AQRO60306 1485 aaKnown RBP eCLIP23.27■■□□□ 1.32
CEP290-205ENST00000550962 TDRD9Q8NDG6 1382 aaKnown RBP23.22■■□□□ 1.31
CEP290-205ENST00000550962 TOP2BQ02880 1626 aa23.21■■□□□ 1.31
CEP290-205ENST00000550962 BIVM-ERCC5R4GMW8 1640 aa23.19■■□□□ 1.3
CEP290-205ENST00000550962 ABCA10Q8WWZ4 1543 aa23.16■■□□□ 1.3
CEP290-205ENST00000550962 GRIN2BQ13224 1484 aa23.15■■□□□ 1.3
CEP290-205ENST00000550962 SYNJ1O43426 1573 aa23.14■■□□□ 1.29
CEP290-205ENST00000550962 GAPVD1Q14C86 1478 aa23.11■■□□□ 1.29
CEP290-205ENST00000550962 MAGI1Q96QZ7 1491 aaPredicted RBP23.11■■□□□ 1.29
CEP290-205ENST00000550962 FBLN2P98095 1184 aa23.1■■□□□ 1.29
CEP290-205ENST00000550962 SNAPC4Q5SXM2 1469 aa23.1■■□□□ 1.29
CEP290-205ENST00000550962 CHD1O14646 1710 aa23.06■■□□□ 1.28
CEP290-205ENST00000550962 ABCA5Q8WWZ7 1642 aa23.05■■□□□ 1.28
CEP290-205ENST00000550962 PBRM1Q86U86 1689 aa23.04■■□□□ 1.28
CEP290-205ENST00000550962 CHMP7Q8WUX9 453 aaPredicted RBP23.04■■□□□ 1.28
CEP290-205ENST00000550962 SYNJ2O15056 1496 aa23.02■■□□□ 1.28
CEP290-205ENST00000550962 ERICH3Q5RHP9 1530 aa22.92■■□□□ 1.26
CEP290-205ENST00000550962 ARHGEF11O15085 1522 aa22.87■■□□□ 1.25
CEP290-205ENST00000550962 TRIM41Q8WV44 630 aa22.87■■□□□ 1.25
CEP290-205ENST00000550962 ADAMTS12P58397 1594 aa22.87■■□□□ 1.25
CEP290-205ENST00000550962 RIMBP3CA6NJZ7 1639 aa22.86■■□□□ 1.25
CEP290-205ENST00000550962 RIMBP3BA6NNM3 1639 aa22.86■■□□□ 1.25
CEP290-205ENST00000550962 RIMBP3Q9UFD9 1639 aa22.86■■□□□ 1.25
CEP290-205ENST00000550962 FHAD1B1AJZ9 1412 aa22.86■■□□□ 1.25
CEP290-205ENST00000550962 CLASP1Q7Z460 1538 aa22.83■■□□□ 1.25
CEP290-205ENST00000550962 GRIN2AQ12879 1464 aa22.83■■□□□ 1.25
CEP290-205ENST00000550962 KIF27Q86VH2 1401 aa22.82■■□□□ 1.24
CEP290-205ENST00000550962 NUP160Q12769 1436 aa22.72■■□□□ 1.23
CEP290-205ENST00000550962 CUL7Q14999 1698 aa22.7■■□□□ 1.22
CEP290-205ENST00000550962 CYB5RLQ6IPT4 315 aa22.67■■□□□ 1.22
CEP290-205ENST00000550962 CEP170Q5SW79 1584 aa22.67■■□□□ 1.22
CEP290-205ENST00000550962 IGF1RP08069 1367 aa22.66■■□□□ 1.22
CEP290-205ENST00000550962 ARAP1Q96P48 1450 aa22.66■■□□□ 1.22
CEP290-205ENST00000550962 CARMIL1Q5VZK9 1371 aa22.57■■□□□ 1.2
CEP290-205ENST00000550962 SHROOM2Q13796 1616 aa22.54■■□□□ 1.2
CEP290-205ENST00000550962 RUSC2Q8N2Y8 1516 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms