RNA–Protein interactions for RNA: ENST00000550909.1

LINC02354-205, Transcript of long intergenic non-protein coding RNA 2354, humanhuman

TSL 4

Gene LINC02354, Length 582 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02354-205ENST00000550909 NISCHQ9Y2I1 1504 aa20.88■□□□□ 0.93
LINC02354-205ENST00000550909 AEBP2Q6ZN18 517 aaPredicted RBP20.37■□□□□ 0.85
LINC02354-205ENST00000550909 CHIC1Q5VXU3 224 aa19.38■□□□□ 0.69
LINC02354-205ENST00000550909 ABCC9O60706 1549 aa19■□□□□ 0.63
LINC02354-205ENST00000550909 CCDC180Q9P1Z9 1646 aa18.63■□□□□ 0.57
LINC02354-205ENST00000550909 DNAJC5BQ9UF47 199 aa18.54■□□□□ 0.56
LINC02354-205ENST00000550909 PABPN1Q86U42 306 aaKnown RBP eCLIP17.7■□□□□ 0.42
LINC02354-205ENST00000550909 RB1CC1Q8TDY2 1594 aa17.62■□□□□ 0.41
LINC02354-205ENST00000550909 MYO15BQ96JP2 1530 aa17.46■□□□□ 0.39
LINC02354-205ENST00000550909 NACADO15069 1562 aa17.45■□□□□ 0.38
LINC02354-205ENST00000550909 DCAF8L2P0C7V8 631 aa17.43■□□□□ 0.38
LINC02354-205ENST00000550909 SENP3Q9H4L4 574 aaPredicted RBP17.43■□□□□ 0.38
LINC02354-205ENST00000550909 DNAJC5Q9H3Z4 198 aa17.41■□□□□ 0.38
LINC02354-205ENST00000550909 ZCCHC6Q5VYS8 1495 aaKnown RBP17.41■□□□□ 0.38
LINC02354-205ENST00000550909 DCAF1Q9Y4B6 1507 aa17.37■□□□□ 0.37
LINC02354-205ENST00000550909 BICRAQ9NZM4 1560 aa17.19■□□□□ 0.34
LINC02354-205ENST00000550909 PHF23Q9BUL5 403 aaPredicted RBP17.17■□□□□ 0.34
LINC02354-205ENST00000550909 UNC13AQ9UPW8 1703 aa17.16■□□□□ 0.34
LINC02354-205ENST00000550909 CECR2Q9BXF3 1484 aa17.14■□□□□ 0.33
LINC02354-205ENST00000550909 CC2D2AQ9P2K1 1620 aa17.02■□□□□ 0.31
LINC02354-205ENST00000550909 SHROOM4Q9ULL8 1493 aa16.83■□□□□ 0.28
LINC02354-205ENST00000550909 SCRIBQ14160 1630 aa16.82■□□□□ 0.28
LINC02354-205ENST00000550909 EIF4G1Q04637 1599 aaKnown RBP16.81■□□□□ 0.28
LINC02354-205ENST00000550909 CUX2O14529 1486 aa16.51■□□□□ 0.23
LINC02354-205ENST00000550909 TRIM41Q8WV44 630 aa16.46■□□□□ 0.23
LINC02354-205ENST00000550909 ERCC6Q03468 1493 aa16.4■□□□□ 0.22
LINC02354-205ENST00000550909 FOXD1Q16676 465 aa16.21■□□□□ 0.19
LINC02354-205ENST00000550909 SMARCA4P51532 1647 aa16.19■□□□□ 0.18
LINC02354-205ENST00000550909 BAZ1AQ9NRL2 1556 aaPredicted RBP16.17■□□□□ 0.18
LINC02354-205ENST00000550909 NESP48681 1621 aa16.14■□□□□ 0.17
LINC02354-205ENST00000550909 PEG3Q9GZU2 1588 aa16.12■□□□□ 0.17
LINC02354-205ENST00000550909 NCAPD3P42695 1498 aa16.11■□□□□ 0.17
LINC02354-205ENST00000550909 ATAD2BQ9ULI0 1458 aa16.08■□□□□ 0.16
LINC02354-205ENST00000550909 SMARCA2P51531 1590 aa16.08■□□□□ 0.16
LINC02354-205ENST00000550909 MROH2BQ7Z745 1585 aa16.06■□□□□ 0.16
LINC02354-205ENST00000550909 HMGXB3Q12766 1538 aa16.04■□□□□ 0.16
LINC02354-205ENST00000550909 THOC2Q8NI27 1593 aaKnown RBP15.96■□□□□ 0.14
LINC02354-205ENST00000550909 BAZ1BQ9UIG0 1483 aaKnown RBP15.9■□□□□ 0.14
LINC02354-205ENST00000550909 RSF1Q96T23 1441 aaPredicted RBP15.89■□□□□ 0.13
LINC02354-205ENST00000550909 WIZO95785 1651 aa15.88■□□□□ 0.13
LINC02354-205ENST00000550909 OSCARQ8IYS5 282 aa15.79■□□□□ 0.12
LINC02354-205ENST00000550909 PDS5BQ9NTI5 1447 aa15.76■□□□□ 0.11
LINC02354-205ENST00000550909 KIF21AQ7Z4S6 1674 aa15.75■□□□□ 0.11
LINC02354-205ENST00000550909 LAMC3Q9Y6N6 1575 aa15.74■□□□□ 0.11
LINC02354-205ENST00000550909 TOP2AP11388 1531 aaKnown RBP15.73■□□□□ 0.11
LINC02354-205ENST00000550909 MRC2Q9UBG0 1479 aa15.66■□□□□ 0.1
LINC02354-205ENST00000550909 CADPSQ9ULU8 1353 aa15.62■□□□□ 0.09
LINC02354-205ENST00000550909 WDR62O43379 1518 aa15.6■□□□□ 0.09
LINC02354-205ENST00000550909 TRHP20396 242 aaPredicted RBP15.56■□□□□ 0.08
LINC02354-205ENST00000550909 RIMBP3CA6NJZ7 1639 aa15.54■□□□□ 0.08
LINC02354-205ENST00000550909 RIMBP3BA6NNM3 1639 aa15.54■□□□□ 0.08
LINC02354-205ENST00000550909 RIMBP3Q9UFD9 1639 aa15.54■□□□□ 0.08
LINC02354-205ENST00000550909 CFTRP13569 1480 aa15.53■□□□□ 0.08
LINC02354-205ENST00000550909 CYB5RLQ6IPT4 315 aa15.53■□□□□ 0.08
LINC02354-205ENST00000550909 CCDC88BA6NC98 1476 aa15.52■□□□□ 0.08
LINC02354-205ENST00000550909 PRDM2Q13029 1718 aa15.51■□□□□ 0.07
LINC02354-205ENST00000550909 PLPPR3Q6T4P5 718 aa15.49■□□□□ 0.07
LINC02354-205ENST00000550909 ARHGEF11O15085 1522 aa15.46■□□□□ 0.07
LINC02354-205ENST00000550909 CEP164Q9UPV0 1460 aa15.46■□□□□ 0.06
LINC02354-205ENST00000550909 FANCD2Q9BXW9 1451 aa15.42■□□□□ 0.06
LINC02354-205ENST00000550909 URB2Q14146 1524 aaKnown RBP15.35■□□□□ 0.05
LINC02354-205ENST00000550909 ZNF608Q9ULD9 1512 aaPredicted RBP15.31■□□□□ 0.04
LINC02354-205ENST00000550909 SUPT5HO00267 1087 aaKnown RBP15.3■□□□□ 0.04
LINC02354-205ENST00000550909 ARAP1Q96P48 1450 aa15.28■□□□□ 0.04
LINC02354-205ENST00000550909 MSH5O43196 834 aa15.23■□□□□ 0.03
LINC02354-205ENST00000550909 FBLN2P98095 1184 aa15.21■□□□□ 0.03
LINC02354-205ENST00000550909 ABCC8Q09428 1581 aa15.2■□□□□ 0.02
LINC02354-205ENST00000550909 IFT140Q96RY7 1462 aa15.18■□□□□ 0.02
LINC02354-205ENST00000550909 DNMBPQ6XZF7 1577 aa15.16■□□□□ 0.02
LINC02354-205ENST00000550909 TOPBP1Q92547 1522 aa15.16■□□□□ 0.02
LINC02354-205ENST00000550909 PIAS4Q8N2W9 510 aaPredicted RBP15.14■□□□□ 0.01
LINC02354-205ENST00000550909 PPP6R1Q9UPN7 881 aa15.13■□□□□ 0.01
LINC02354-205ENST00000550909 AQRO60306 1485 aaKnown RBP eCLIP15.11■□□□□ 0.01
LINC02354-205ENST00000550909 CUX1P39880 1505 aa15.07■□□□□ 0
LINC02354-205ENST00000550909 TARBP1Q13395 1621 aaKnown RBP15.06■□□□□ 0
LINC02354-205ENST00000550909 ADRA2BP18089 450 aa15.06■□□□□ 0
LINC02354-205ENST00000550909 EIF4G3O43432 1585 aaKnown RBP15.06■□□□□ 0
LINC02354-205ENST00000550909 CHD1O14646 1710 aa15.05■□□□□ -0
LINC02354-205ENST00000550909 ILDR1Q86SU0 546 aaPredicted RBP15.04■□□□□ -0
LINC02354-205ENST00000550909 POLA1P09884 1462 aaPredicted RBP15.03■□□□□ -0
LINC02354-205ENST00000550909 BIVM-ERCC5R4GMW8 1640 aa15.01□□□□□ -0.01
LINC02354-205ENST00000550909 WDR97A6NE52 1622 aa14.98□□□□□ -0.01
LINC02354-205ENST00000550909 TOP2BQ02880 1626 aa14.98□□□□□ -0.01
LINC02354-205ENST00000550909 FGD5Q6ZNL6 1462 aa14.97□□□□□ -0.01
LINC02354-205ENST00000550909 TDRD9Q8NDG6 1382 aaKnown RBP14.94□□□□□ -0.02
LINC02354-205ENST00000550909 SYNJ1O43426 1573 aa14.94□□□□□ -0.02
LINC02354-205ENST00000550909 SOGA1O94964 1423 aa14.93□□□□□ -0.02
LINC02354-205ENST00000550909 WRNQ14191 1432 aaPredicted RBP eCLIP14.93□□□□□ -0.02
LINC02354-205ENST00000550909 CHMP7Q8WUX9 453 aaPredicted RBP14.93□□□□□ -0.02
LINC02354-205ENST00000550909 RAD54L2Q9Y4B4 1467 aa14.91□□□□□ -0.02
LINC02354-205ENST00000550909 CLASP1Q7Z460 1538 aa14.9□□□□□ -0.02
LINC02354-205ENST00000550909 ABCA10Q8WWZ4 1543 aa14.89□□□□□ -0.03
LINC02354-205ENST00000550909 GAPVD1Q14C86 1478 aa14.87□□□□□ -0.03
LINC02354-205ENST00000550909 SNAPC4Q5SXM2 1469 aa14.87□□□□□ -0.03
LINC02354-205ENST00000550909 ABCA5Q8WWZ7 1642 aa14.84□□□□□ -0.03
LINC02354-205ENST00000550909 POTEDQ86YR6 584 aa14.83□□□□□ -0.04
LINC02354-205ENST00000550909 KDM4FA0A1W2PPD8 638 aa14.8□□□□□ -0.04
LINC02354-205ENST00000550909 PBRM1Q86U86 1689 aa14.8□□□□□ -0.04
LINC02354-205ENST00000550909 GRIN2BQ13224 1484 aa14.78□□□□□ -0.04
LINC02354-205ENST00000550909 MAGI1Q96QZ7 1491 aaPredicted RBP14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms