RNA–Protein interactions for RNA: ENST00000550873.5

TPCN1-215, Transcript of two pore segment channel 1, humanhuman

TSL 5

Gene TPCN1, Length 527 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-215ENST00000550873 NISCHQ9Y2I1 1504 aa30.89■■■□□ 2.54
TPCN1-215ENST00000550873 ABCC9O60706 1549 aa28.46■■■□□ 2.15
TPCN1-215ENST00000550873 CCDC180Q9P1Z9 1646 aa27.81■■■□□ 2.04
TPCN1-215ENST00000550873 DNAJC5BQ9UF47 199 aa27.36■■□□□ 1.97
TPCN1-215ENST00000550873 RB1CC1Q8TDY2 1594 aa26.81■■□□□ 1.88
TPCN1-215ENST00000550873 NACADO15069 1562 aa26.53■■□□□ 1.84
TPCN1-215ENST00000550873 PABPN1Q86U42 306 aaKnown RBP eCLIP26.51■■□□□ 1.83
TPCN1-215ENST00000550873 DCAF8L2P0C7V8 631 aa26.39■■□□□ 1.82
TPCN1-215ENST00000550873 BICRAQ9NZM4 1560 aa26.08■■□□□ 1.77
TPCN1-215ENST00000550873 UNC13AQ9UPW8 1703 aa26.08■■□□□ 1.76
TPCN1-215ENST00000550873 MYO15BQ96JP2 1530 aa26.04■■□□□ 1.76
TPCN1-215ENST00000550873 CECR2Q9BXF3 1484 aa25.72■■□□□ 1.71
TPCN1-215ENST00000550873 SHROOM4Q9ULL8 1493 aa25.67■■□□□ 1.7
TPCN1-215ENST00000550873 CC2D2AQ9P2K1 1620 aa25.64■■□□□ 1.7
TPCN1-215ENST00000550873 DNAJC5Q9H3Z4 198 aa25.52■■□□□ 1.68
TPCN1-215ENST00000550873 DCAF1Q9Y4B6 1507 aa25.49■■□□□ 1.67
TPCN1-215ENST00000550873 EIF4G1Q04637 1599 aaKnown RBP25.46■■□□□ 1.67
TPCN1-215ENST00000550873 ZCCHC6Q5VYS8 1495 aaKnown RBP25.45■■□□□ 1.66
TPCN1-215ENST00000550873 SCRIBQ14160 1630 aa25.31■■□□□ 1.64
TPCN1-215ENST00000550873 CUX2O14529 1486 aa24.76■■□□□ 1.55
TPCN1-215ENST00000550873 NCAPD3P42695 1498 aa24.59■■□□□ 1.53
TPCN1-215ENST00000550873 ERCC6Q03468 1493 aa24.58■■□□□ 1.52
TPCN1-215ENST00000550873 ATAD2BQ9ULI0 1458 aa24.4■■□□□ 1.5
TPCN1-215ENST00000550873 NESP48681 1621 aa24.31■■□□□ 1.48
TPCN1-215ENST00000550873 HMGXB3Q12766 1538 aa24.24■■□□□ 1.47
TPCN1-215ENST00000550873 SMARCA2P51531 1590 aa24.23■■□□□ 1.47
TPCN1-215ENST00000550873 SMARCA4P51532 1647 aa24.13■■□□□ 1.45
TPCN1-215ENST00000550873 THOC2Q8NI27 1593 aaKnown RBP24.08■■□□□ 1.44
TPCN1-215ENST00000550873 TRIM41Q8WV44 630 aa24.07■■□□□ 1.44
TPCN1-215ENST00000550873 BAZ1BQ9UIG0 1483 aaKnown RBP24.07■■□□□ 1.44
TPCN1-215ENST00000550873 LAMC3Q9Y6N6 1575 aa24■■□□□ 1.43
TPCN1-215ENST00000550873 BAZ1AQ9NRL2 1556 aaPredicted RBP23.97■■□□□ 1.43
TPCN1-215ENST00000550873 PDS5BQ9NTI5 1447 aa23.96■■□□□ 1.43
TPCN1-215ENST00000550873 PEG3Q9GZU2 1588 aa23.95■■□□□ 1.43
TPCN1-215ENST00000550873 KIF21AQ7Z4S6 1674 aa23.83■■□□□ 1.41
TPCN1-215ENST00000550873 CADPSQ9ULU8 1353 aa23.82■■□□□ 1.4
TPCN1-215ENST00000550873 MROH2BQ7Z745 1585 aa23.79■■□□□ 1.4
TPCN1-215ENST00000550873 MRC2Q9UBG0 1479 aa23.74■■□□□ 1.39
TPCN1-215ENST00000550873 WDR62O43379 1518 aa23.68■■□□□ 1.38
TPCN1-215ENST00000550873 OSCARQ8IYS5 282 aa23.66■■□□□ 1.38
TPCN1-215ENST00000550873 CEP164Q9UPV0 1460 aa23.51■■□□□ 1.35
TPCN1-215ENST00000550873 FANCD2Q9BXW9 1451 aa23.48■■□□□ 1.35
TPCN1-215ENST00000550873 WIZO95785 1651 aa23.41■■□□□ 1.34
TPCN1-215ENST00000550873 CFTRP13569 1480 aa23.4■■□□□ 1.34
TPCN1-215ENST00000550873 URB2Q14146 1524 aaKnown RBP23.32■■□□□ 1.32
TPCN1-215ENST00000550873 RIMBP3CA6NJZ7 1639 aa23.22■■□□□ 1.31
TPCN1-215ENST00000550873 RIMBP3BA6NNM3 1639 aa23.22■■□□□ 1.31
TPCN1-215ENST00000550873 RIMBP3Q9UFD9 1639 aa23.22■■□□□ 1.31
TPCN1-215ENST00000550873 RSF1Q96T23 1441 aaPredicted RBP23.16■■□□□ 1.3
TPCN1-215ENST00000550873 ARHGEF11O15085 1522 aa23.14■■□□□ 1.3
TPCN1-215ENST00000550873 CYB5RLQ6IPT4 315 aa23.13■■□□□ 1.29
TPCN1-215ENST00000550873 ZNF608Q9ULD9 1512 aaPredicted RBP23.13■■□□□ 1.29
TPCN1-215ENST00000550873 IFT140Q96RY7 1462 aa23.11■■□□□ 1.29
TPCN1-215ENST00000550873 TOP2AP11388 1531 aaKnown RBP23.09■■□□□ 1.29
TPCN1-215ENST00000550873 TRHP20396 242 aaPredicted RBP23■■□□□ 1.27
TPCN1-215ENST00000550873 TOPBP1Q92547 1522 aa22.97■■□□□ 1.27
TPCN1-215ENST00000550873 CCDC88BA6NC98 1476 aa22.92■■□□□ 1.26
TPCN1-215ENST00000550873 ABCC8Q09428 1581 aa22.91■■□□□ 1.26
TPCN1-215ENST00000550873 AQRO60306 1485 aaKnown RBP eCLIP22.89■■□□□ 1.25
TPCN1-215ENST00000550873 ARAP1Q96P48 1450 aa22.89■■□□□ 1.25
TPCN1-215ENST00000550873 PRDM2Q13029 1718 aa22.87■■□□□ 1.25
TPCN1-215ENST00000550873 EIF4G3O43432 1585 aaKnown RBP22.85■■□□□ 1.25
TPCN1-215ENST00000550873 FBLN2P98095 1184 aa22.85■■□□□ 1.25
TPCN1-215ENST00000550873 DNMBPQ6XZF7 1577 aa22.78■■□□□ 1.24
TPCN1-215ENST00000550873 TARBP1Q13395 1621 aaKnown RBP22.77■■□□□ 1.24
TPCN1-215ENST00000550873 CHD1O14646 1710 aa22.75■■□□□ 1.23
TPCN1-215ENST00000550873 AEBP2Q6ZN18 517 aaPredicted RBP22.72■■□□□ 1.23
TPCN1-215ENST00000550873 POLA1P09884 1462 aaPredicted RBP22.7■■□□□ 1.22
TPCN1-215ENST00000550873 TDRD9Q8NDG6 1382 aaKnown RBP22.68■■□□□ 1.22
TPCN1-215ENST00000550873 RAD54L2Q9Y4B4 1467 aa22.66■■□□□ 1.22
TPCN1-215ENST00000550873 SOGA1O94964 1423 aa22.65■■□□□ 1.22
TPCN1-215ENST00000550873 CHMP7Q8WUX9 453 aaPredicted RBP22.62■■□□□ 1.21
TPCN1-215ENST00000550873 CLASP1Q7Z460 1538 aa22.58■■□□□ 1.21
TPCN1-215ENST00000550873 SNAPC4Q5SXM2 1469 aa22.56■■□□□ 1.2
TPCN1-215ENST00000550873 MAGI1Q96QZ7 1491 aaPredicted RBP22.49■■□□□ 1.19
TPCN1-215ENST00000550873 SYNJ1O43426 1573 aa22.49■■□□□ 1.19
TPCN1-215ENST00000550873 WDR97A6NE52 1622 aa22.47■■□□□ 1.19
TPCN1-215ENST00000550873 GRIN2BQ13224 1484 aa22.47■■□□□ 1.19
TPCN1-215ENST00000550873 FGD5Q6ZNL6 1462 aa22.47■■□□□ 1.19
TPCN1-215ENST00000550873 SYNJ2O15056 1496 aa22.45■■□□□ 1.18
TPCN1-215ENST00000550873 GAPVD1Q14C86 1478 aa22.42■■□□□ 1.18
TPCN1-215ENST00000550873 CUX1P39880 1505 aa22.36■■□□□ 1.17
TPCN1-215ENST00000550873 ABCA10Q8WWZ4 1543 aa22.21■■□□□ 1.15
TPCN1-215ENST00000550873 ERCC6L2Q5T890 1561 aa22.21■■□□□ 1.15
TPCN1-215ENST00000550873 PBRM1Q86U86 1689 aa22.17■■□□□ 1.14
TPCN1-215ENST00000550873 GRIN2AQ12879 1464 aa22.15■■□□□ 1.14
TPCN1-215ENST00000550873 NUP160Q12769 1436 aa22.14■■□□□ 1.14
TPCN1-215ENST00000550873 ABCA5Q8WWZ7 1642 aa22.13■■□□□ 1.13
TPCN1-215ENST00000550873 CEP170Q5SW79 1584 aa22.12■■□□□ 1.13
TPCN1-215ENST00000550873 WRNQ14191 1432 aaPredicted RBP eCLIP22.04■■□□□ 1.12
TPCN1-215ENST00000550873 FHAD1B1AJZ9 1412 aa22.03■■□□□ 1.12
TPCN1-215ENST00000550873 SHROOM2Q13796 1616 aa22.02■■□□□ 1.12
TPCN1-215ENST00000550873 JPH4Q96JJ6 628 aa22.01■■□□□ 1.11
TPCN1-215ENST00000550873 ADAMTS12P58397 1594 aa21.99■■□□□ 1.11
TPCN1-215ENST00000550873 FAM69CQ0P6D2 419 aa21.99■■□□□ 1.11
TPCN1-215ENST00000550873 PRG4Q92954 1404 aaPredicted RBP21.98■■□□□ 1.11
TPCN1-215ENST00000550873 KIF13AQ9H1H9 1805 aa21.96■■□□□ 1.11
TPCN1-215ENST00000550873 KDM4FA0A1W2PPD8 638 aa21.93■■□□□ 1.1
TPCN1-215ENST00000550873 NPM1P06748 294 aaKnown RBP eCLIP21.93■■□□□ 1.1
TPCN1-215ENST00000550873 ABCC10Q5T3U5 1492 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms