RNA–Protein interactions for RNA: ENST00000550846.5

PFDN5-211, Transcript of prefoldin subunit 5, humanhuman

TSL 2 BASIC

Gene PFDN5, Length 392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-211ENST00000550846 NISCHQ9Y2I1 1504 aa20.15■□□□□ 0.82
PFDN5-211ENST00000550846 ABCC9O60706 1549 aa18.31■□□□□ 0.52
PFDN5-211ENST00000550846 CCDC180Q9P1Z9 1646 aa18.07■□□□□ 0.48
PFDN5-211ENST00000550846 RB1CC1Q8TDY2 1594 aa17.28■□□□□ 0.36
PFDN5-211ENST00000550846 DNAJC5BQ9UF47 199 aa17.24■□□□□ 0.35
PFDN5-211ENST00000550846 DCAF8L2P0C7V8 631 aa17.2■□□□□ 0.34
PFDN5-211ENST00000550846 NACADO15069 1562 aa17.11■□□□□ 0.33
PFDN5-211ENST00000550846 PABPN1Q86U42 306 aaKnown RBP eCLIP17.06■□□□□ 0.32
PFDN5-211ENST00000550846 UNC13AQ9UPW8 1703 aa16.9■□□□□ 0.3
PFDN5-211ENST00000550846 BICRAQ9NZM4 1560 aa16.81■□□□□ 0.28
PFDN5-211ENST00000550846 MYO15BQ96JP2 1530 aa16.77■□□□□ 0.28
PFDN5-211ENST00000550846 ZCCHC6Q5VYS8 1495 aaKnown RBP16.68■□□□□ 0.26
PFDN5-211ENST00000550846 SCRIBQ14160 1630 aa16.59■□□□□ 0.25
PFDN5-211ENST00000550846 DCAF1Q9Y4B6 1507 aa16.55■□□□□ 0.24
PFDN5-211ENST00000550846 CC2D2AQ9P2K1 1620 aa16.48■□□□□ 0.23
PFDN5-211ENST00000550846 CECR2Q9BXF3 1484 aa16.46■□□□□ 0.23
PFDN5-211ENST00000550846 SHROOM4Q9ULL8 1493 aa16.46■□□□□ 0.23
PFDN5-211ENST00000550846 EIF4G1Q04637 1599 aaKnown RBP16.41■□□□□ 0.22
PFDN5-211ENST00000550846 DNAJC5Q9H3Z4 198 aa15.83■□□□□ 0.12
PFDN5-211ENST00000550846 ERCC6Q03468 1493 aa15.81■□□□□ 0.12
PFDN5-211ENST00000550846 NCAPD3P42695 1498 aa15.8■□□□□ 0.12
PFDN5-211ENST00000550846 ATAD2BQ9ULI0 1458 aa15.78■□□□□ 0.12
PFDN5-211ENST00000550846 SMARCA4P51532 1647 aa15.76■□□□□ 0.11
PFDN5-211ENST00000550846 SMARCA2P51531 1590 aa15.71■□□□□ 0.11
PFDN5-211ENST00000550846 NESP48681 1621 aa15.71■□□□□ 0.11
PFDN5-211ENST00000550846 CUX2O14529 1486 aa15.71■□□□□ 0.1
PFDN5-211ENST00000550846 HMGXB3Q12766 1538 aa15.68■□□□□ 0.1
PFDN5-211ENST00000550846 BAZ1BQ9UIG0 1483 aaKnown RBP15.65■□□□□ 0.1
PFDN5-211ENST00000550846 BAZ1AQ9NRL2 1556 aaPredicted RBP15.64■□□□□ 0.09
PFDN5-211ENST00000550846 MROH2BQ7Z745 1585 aa15.58■□□□□ 0.08
PFDN5-211ENST00000550846 PEG3Q9GZU2 1588 aa15.53■□□□□ 0.08
PFDN5-211ENST00000550846 THOC2Q8NI27 1593 aaKnown RBP15.49■□□□□ 0.07
PFDN5-211ENST00000550846 LAMC3Q9Y6N6 1575 aa15.47■□□□□ 0.07
PFDN5-211ENST00000550846 KIF21AQ7Z4S6 1674 aa15.45■□□□□ 0.06
PFDN5-211ENST00000550846 PDS5BQ9NTI5 1447 aa15.41■□□□□ 0.06
PFDN5-211ENST00000550846 WIZO95785 1651 aa15.39■□□□□ 0.05
PFDN5-211ENST00000550846 CADPSQ9ULU8 1353 aa15.36■□□□□ 0.05
PFDN5-211ENST00000550846 MRC2Q9UBG0 1479 aa15.31■□□□□ 0.04
PFDN5-211ENST00000550846 WDR62O43379 1518 aa15.24■□□□□ 0.03
PFDN5-211ENST00000550846 TRIM41Q8WV44 630 aa15.24■□□□□ 0.03
PFDN5-211ENST00000550846 CEP164Q9UPV0 1460 aa15.23■□□□□ 0.03
PFDN5-211ENST00000550846 FANCD2Q9BXW9 1451 aa15.21■□□□□ 0.03
PFDN5-211ENST00000550846 RSF1Q96T23 1441 aaPredicted RBP15.2■□□□□ 0.02
PFDN5-211ENST00000550846 TOP2AP11388 1531 aaKnown RBP15.15■□□□□ 0.02
PFDN5-211ENST00000550846 CFTRP13569 1480 aa15.14■□□□□ 0.01
PFDN5-211ENST00000550846 URB2Q14146 1524 aaKnown RBP15.11■□□□□ 0.01
PFDN5-211ENST00000550846 OSCARQ8IYS5 282 aa15.01□□□□□ -0.01
PFDN5-211ENST00000550846 CCDC88BA6NC98 1476 aa15□□□□□ -0.01
PFDN5-211ENST00000550846 ZNF608Q9ULD9 1512 aaPredicted RBP14.96□□□□□ -0.02
PFDN5-211ENST00000550846 PRDM2Q13029 1718 aa14.95□□□□□ -0.02
PFDN5-211ENST00000550846 TOPBP1Q92547 1522 aa14.91□□□□□ -0.02
PFDN5-211ENST00000550846 IFT140Q96RY7 1462 aa14.9□□□□□ -0.02
PFDN5-211ENST00000550846 RIMBP3CA6NJZ7 1639 aa14.85□□□□□ -0.03
PFDN5-211ENST00000550846 RIMBP3BA6NNM3 1639 aa14.85□□□□□ -0.03
PFDN5-211ENST00000550846 RIMBP3Q9UFD9 1639 aa14.85□□□□□ -0.03
PFDN5-211ENST00000550846 EIF4G3O43432 1585 aaKnown RBP14.85□□□□□ -0.03
PFDN5-211ENST00000550846 DNMBPQ6XZF7 1577 aa14.83□□□□□ -0.04
PFDN5-211ENST00000550846 AQRO60306 1485 aaKnown RBP eCLIP14.81□□□□□ -0.046e-7■■■■■ 32.7
PFDN5-211ENST00000550846 ARHGEF11O15085 1522 aa14.8□□□□□ -0.04
PFDN5-211ENST00000550846 FBLN2P98095 1184 aa14.79□□□□□ -0.04
PFDN5-211ENST00000550846 ABCC8Q09428 1581 aa14.79□□□□□ -0.04
PFDN5-211ENST00000550846 TARBP1Q13395 1621 aaKnown RBP14.76□□□□□ -0.05
PFDN5-211ENST00000550846 POLA1P09884 1462 aaPredicted RBP14.76□□□□□ -0.05
PFDN5-211ENST00000550846 RAD54L2Q9Y4B4 1467 aa14.75□□□□□ -0.05
PFDN5-211ENST00000550846 CHD1O14646 1710 aa14.75□□□□□ -0.05
PFDN5-211ENST00000550846 CYB5RLQ6IPT4 315 aa14.73□□□□□ -0.05
PFDN5-211ENST00000550846 TDRD9Q8NDG6 1382 aaKnown RBP14.72□□□□□ -0.05
PFDN5-211ENST00000550846 SOGA1O94964 1423 aa14.68□□□□□ -0.06
PFDN5-211ENST00000550846 FGD5Q6ZNL6 1462 aa14.67□□□□□ -0.06
PFDN5-211ENST00000550846 ARAP1Q96P48 1450 aa14.66□□□□□ -0.06
PFDN5-211ENST00000550846 SNAPC4Q5SXM2 1469 aa14.65□□□□□ -0.06
PFDN5-211ENST00000550846 CUX1P39880 1505 aa14.64□□□□□ -0.07
PFDN5-211ENST00000550846 TRHP20396 242 aaPredicted RBP14.63□□□□□ -0.07
PFDN5-211ENST00000550846 CHMP7Q8WUX9 453 aaPredicted RBP14.6□□□□□ -0.07
PFDN5-211ENST00000550846 SUPT5HO00267 1087 aaKnown RBP14.58□□□□□ -0.08
PFDN5-211ENST00000550846 GRIN2BQ13224 1484 aa14.56□□□□□ -0.08
PFDN5-211ENST00000550846 CLASP1Q7Z460 1538 aa14.55□□□□□ -0.08
PFDN5-211ENST00000550846 MAGI1Q96QZ7 1491 aaPredicted RBP14.54□□□□□ -0.08
PFDN5-211ENST00000550846 SYNJ1O43426 1573 aa14.53□□□□□ -0.08
PFDN5-211ENST00000550846 WDR97A6NE52 1622 aa14.52□□□□□ -0.09
PFDN5-211ENST00000550846 SYNJ2O15056 1496 aa14.51□□□□□ -0.09
PFDN5-211ENST00000550846 GAPVD1Q14C86 1478 aa14.5□□□□□ -0.09
PFDN5-211ENST00000550846 PBRM1Q86U86 1689 aa14.49□□□□□ -0.09
PFDN5-211ENST00000550846 ABCA10Q8WWZ4 1543 aa14.44□□□□□ -0.1
PFDN5-211ENST00000550846 ABCA5Q8WWZ7 1642 aa14.44□□□□□ -0.1
PFDN5-211ENST00000550846 WRNQ14191 1432 aaPredicted RBP eCLIP14.4□□□□□ -0.13e-8■□□□□ 9.6
PFDN5-211ENST00000550846 ERCC6L2Q5T890 1561 aa14.39□□□□□ -0.11
PFDN5-211ENST00000550846 GRIN2AQ12879 1464 aa14.38□□□□□ -0.11
PFDN5-211ENST00000550846 ADAMTS12P58397 1594 aa14.36□□□□□ -0.11
PFDN5-211ENST00000550846 CEP170Q5SW79 1584 aa14.34□□□□□ -0.11
PFDN5-211ENST00000550846 TOP2BQ02880 1626 aa14.33□□□□□ -0.11
PFDN5-211ENST00000550846 BIVM-ERCC5R4GMW8 1640 aa14.32□□□□□ -0.12
PFDN5-211ENST00000550846 NUP160Q12769 1436 aa14.31□□□□□ -0.12
PFDN5-211ENST00000550846 FHAD1B1AJZ9 1412 aa14.3□□□□□ -0.12
PFDN5-211ENST00000550846 AEBP2Q6ZN18 517 aaPredicted RBP14.25□□□□□ -0.13
PFDN5-211ENST00000550846 ERICH3Q5RHP9 1530 aa14.25□□□□□ -0.13
PFDN5-211ENST00000550846 PRG4Q92954 1404 aaPredicted RBP14.24□□□□□ -0.13
PFDN5-211ENST00000550846 SHROOM2Q13796 1616 aa14.23□□□□□ -0.13
PFDN5-211ENST00000550846 JPH4Q96JJ6 628 aa14.18□□□□□ -0.14
PFDN5-211ENST00000550846 RUSC2Q8N2Y8 1516 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms