RNA–Protein interactions for RNA: ENST00000550771.5

CACNB3-218, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-218ENST00000550771 NISCHQ9Y2I1 1504 aa51.84■■■■■ 5.89
CACNB3-218ENST00000550771 ABCC9O60706 1549 aa46.49■■■■■ 5.03
CACNB3-218ENST00000550771 CCDC180Q9P1Z9 1646 aa46.47■■■■■ 5.03
CACNB3-218ENST00000550771 RB1CC1Q8TDY2 1594 aa44.27■■■■■ 4.68
CACNB3-218ENST00000550771 NACADO15069 1562 aa44.01■■■■■ 4.64
CACNB3-218ENST00000550771 DCAF8L2P0C7V8 631 aa43.72■■■■■ 4.59
CACNB3-218ENST00000550771 DNAJC5BQ9UF47 199 aa43.65■■■■■ 4.58
CACNB3-218ENST00000550771 MYO15BQ96JP2 1530 aa43.44■■■■■ 4.54
CACNB3-218ENST00000550771 PABPN1Q86U42 306 aaKnown RBP eCLIP43.3■■■■■ 4.52
CACNB3-218ENST00000550771 UNC13AQ9UPW8 1703 aa43.14■■■■■ 4.5
CACNB3-218ENST00000550771 BICRAQ9NZM4 1560 aa42.96■■■■■ 4.47
CACNB3-218ENST00000550771 ZCCHC6Q5VYS8 1495 aaKnown RBP42.96■■■■■ 4.47
CACNB3-218ENST00000550771 DCAF1Q9Y4B6 1507 aa42.87■■■■■ 4.45
CACNB3-218ENST00000550771 SHROOM4Q9ULL8 1493 aa42.49■■■■■ 4.39
CACNB3-218ENST00000550771 SCRIBQ14160 1630 aa42.31■■■■■ 4.36
CACNB3-218ENST00000550771 CC2D2AQ9P2K1 1620 aa41.99■■■■■ 4.31
CACNB3-218ENST00000550771 EIF4G1Q04637 1599 aaKnown RBP41.93■■■■■ 4.3
CACNB3-218ENST00000550771 CECR2Q9BXF3 1484 aa41.92■■■■■ 4.3
CACNB3-218ENST00000550771 NCAPD3P42695 1498 aa40.65■■■■■ 4.1
CACNB3-218ENST00000550771 ATAD2BQ9ULI0 1458 aa40.5■■■■■ 4.07
CACNB3-218ENST00000550771 SMARCA4P51532 1647 aa40.4■■■■■ 4.06
CACNB3-218ENST00000550771 SMARCA2P51531 1590 aa40.38■■■■■ 4.05
CACNB3-218ENST00000550771 HMGXB3Q12766 1538 aa40.31■■■■■ 4.04
CACNB3-218ENST00000550771 BAZ1AQ9NRL2 1556 aaPredicted RBP40.23■■■■■ 4.03
CACNB3-218ENST00000550771 ERCC6Q03468 1493 aa40.17■■■■■ 4.02
CACNB3-218ENST00000550771 DNAJC5Q9H3Z4 198 aa40.15■■■■■ 4.02
CACNB3-218ENST00000550771 CUX2O14529 1486 aa40.14■■■■■ 4.02
CACNB3-218ENST00000550771 BAZ1BQ9UIG0 1483 aaKnown RBP40.08■■■■■ 4.01
CACNB3-218ENST00000550771 PEG3Q9GZU2 1588 aa40.06■■■■■ 4
CACNB3-218ENST00000550771 NESP48681 1621 aa39.92■■■■□ 3.98
CACNB3-218ENST00000550771 MROH2BQ7Z745 1585 aa39.91■■■■□ 3.98
CACNB3-218ENST00000550771 LAMC3Q9Y6N6 1575 aa39.68■■■■□ 3.94
CACNB3-218ENST00000550771 THOC2Q8NI27 1593 aaKnown RBP39.52■■■■□ 3.92
CACNB3-218ENST00000550771 PDS5BQ9NTI5 1447 aa39.5■■■■□ 3.91
CACNB3-218ENST00000550771 CADPSQ9ULU8 1353 aa39.41■■■■□ 3.9
CACNB3-218ENST00000550771 WIZO95785 1651 aa39.38■■■■□ 3.89
CACNB3-218ENST00000550771 KIF21AQ7Z4S6 1674 aa39.35■■■■□ 3.89
CACNB3-218ENST00000550771 MRC2Q9UBG0 1479 aa39.13■■■■□ 3.85
CACNB3-218ENST00000550771 RSF1Q96T23 1441 aaPredicted RBP39.13■■■■□ 3.85
CACNB3-218ENST00000550771 WDR62O43379 1518 aa39.03■■■■□ 3.84
CACNB3-218ENST00000550771 CEP164Q9UPV0 1460 aa38.97■■■■□ 3.83
CACNB3-218ENST00000550771 CFTRP13569 1480 aa38.95■■■■□ 3.83
CACNB3-218ENST00000550771 TOP2AP11388 1531 aaKnown RBP38.94■■■■□ 3.82
CACNB3-218ENST00000550771 FANCD2Q9BXW9 1451 aa38.92■■■■□ 3.82
CACNB3-218ENST00000550771 URB2Q14146 1524 aaKnown RBP38.58■■■■□ 3.77
CACNB3-218ENST00000550771 CCDC88BA6NC98 1476 aa38.51■■■■□ 3.76
CACNB3-218ENST00000550771 PRDM2Q13029 1718 aa38.42■■■■□ 3.74
CACNB3-218ENST00000550771 OSCARQ8IYS5 282 aa38.33■■■■□ 3.73
CACNB3-218ENST00000550771 TRIM41Q8WV44 630 aa38.31■■■■□ 3.72
CACNB3-218ENST00000550771 IFT140Q96RY7 1462 aa38.21■■■■□ 3.71
CACNB3-218ENST00000550771 TOPBP1Q92547 1522 aa38.17■■■■□ 3.7
CACNB3-218ENST00000550771 ABCC8Q09428 1581 aa38.15■■■■□ 3.7
CACNB3-218ENST00000550771 ZNF608Q9ULD9 1512 aaPredicted RBP38.11■■■■□ 3.69
CACNB3-218ENST00000550771 DNMBPQ6XZF7 1577 aa38.02■■■■□ 3.68
CACNB3-218ENST00000550771 EIF4G3O43432 1585 aaKnown RBP37.86■■■■□ 3.65
CACNB3-218ENST00000550771 TARBP1Q13395 1621 aaKnown RBP37.81■■■■□ 3.64
CACNB3-218ENST00000550771 POLA1P09884 1462 aaPredicted RBP37.79■■■■□ 3.64
CACNB3-218ENST00000550771 AQRO60306 1485 aaKnown RBP eCLIP37.77■■■■□ 3.64
CACNB3-218ENST00000550771 RIMBP3CA6NJZ7 1639 aa37.72■■■■□ 3.63
CACNB3-218ENST00000550771 RIMBP3BA6NNM3 1639 aa37.72■■■■□ 3.63
CACNB3-218ENST00000550771 RIMBP3Q9UFD9 1639 aa37.72■■■■□ 3.63
CACNB3-218ENST00000550771 ARHGEF11O15085 1522 aa37.65■■■■□ 3.62
CACNB3-218ENST00000550771 SOGA1O94964 1423 aa37.63■■■■□ 3.61
CACNB3-218ENST00000550771 RAD54L2Q9Y4B4 1467 aa37.63■■■■□ 3.61
CACNB3-218ENST00000550771 TDRD9Q8NDG6 1382 aaKnown RBP37.55■■■■□ 3.6
CACNB3-218ENST00000550771 FGD5Q6ZNL6 1462 aa37.54■■■■□ 3.6
CACNB3-218ENST00000550771 CHD1O14646 1710 aa37.53■■■■□ 3.6
CACNB3-218ENST00000550771 FBLN2P98095 1184 aa37.52■■■■□ 3.6
CACNB3-218ENST00000550771 CUX1P39880 1505 aa37.51■■■■□ 3.59
CACNB3-218ENST00000550771 WDR97A6NE52 1622 aa37.49■■■■□ 3.59
CACNB3-218ENST00000550771 CYB5RLQ6IPT4 315 aa37.4■■■■□ 3.58
CACNB3-218ENST00000550771 SNAPC4Q5SXM2 1469 aa37.39■■■■□ 3.58
CACNB3-218ENST00000550771 SUPT5HO00267 1087 aaKnown RBP37.33■■■■□ 3.57
CACNB3-218ENST00000550771 MAGI1Q96QZ7 1491 aaPredicted RBP37.33■■■■□ 3.57
CACNB3-218ENST00000550771 GRIN2BQ13224 1484 aa37.32■■■■□ 3.56
CACNB3-218ENST00000550771 CHMP7Q8WUX9 453 aaPredicted RBP37.29■■■■□ 3.56
CACNB3-218ENST00000550771 ARAP1Q96P48 1450 aa37.28■■■■□ 3.56
CACNB3-218ENST00000550771 CLASP1Q7Z460 1538 aa37.2■■■■□ 3.55
CACNB3-218ENST00000550771 SYNJ2O15056 1496 aa37.2■■■■□ 3.54
CACNB3-218ENST00000550771 GAPVD1Q14C86 1478 aa37.18■■■■□ 3.54
CACNB3-218ENST00000550771 SYNJ1O43426 1573 aa37.17■■■■□ 3.54
CACNB3-218ENST00000550771 ABCA10Q8WWZ4 1543 aa37.15■■■■□ 3.54
CACNB3-218ENST00000550771 PBRM1Q86U86 1689 aa37.05■■■■□ 3.52
CACNB3-218ENST00000550771 ABCA5Q8WWZ7 1642 aa37.04■■■■□ 3.52
CACNB3-218ENST00000550771 WRNQ14191 1432 aaPredicted RBP eCLIP37.01■■■■□ 3.51
CACNB3-218ENST00000550771 TRHP20396 242 aaPredicted RBP36.96■■■■□ 3.51
CACNB3-218ENST00000550771 TOP2BQ02880 1626 aa36.89■■■■□ 3.5
CACNB3-218ENST00000550771 BIVM-ERCC5R4GMW8 1640 aa36.87■■■■□ 3.49
CACNB3-218ENST00000550771 GRIN2AQ12879 1464 aa36.82■■■■□ 3.49
CACNB3-218ENST00000550771 ADAMTS12P58397 1594 aa36.76■■■■□ 3.48
CACNB3-218ENST00000550771 NUP160Q12769 1436 aa36.73■■■■□ 3.47
CACNB3-218ENST00000550771 FHAD1B1AJZ9 1412 aa36.72■■■■□ 3.47
CACNB3-218ENST00000550771 ERICH3Q5RHP9 1530 aa36.68■■■■□ 3.46
CACNB3-218ENST00000550771 CEP170Q5SW79 1584 aa36.65■■■■□ 3.46
CACNB3-218ENST00000550771 ERCC6L2Q5T890 1561 aa36.57■■■■□ 3.44
CACNB3-218ENST00000550771 SHROOM2Q13796 1616 aa36.51■■■■□ 3.43
CACNB3-218ENST00000550771 JPH4Q96JJ6 628 aa36.36■■■■□ 3.41
CACNB3-218ENST00000550771 PRG4Q92954 1404 aaPredicted RBP36.34■■■■□ 3.41
CACNB3-218ENST00000550771 RUSC2Q8N2Y8 1516 aa36.24■■■■□ 3.39
CACNB3-218ENST00000550771 KIF27Q86VH2 1401 aa36.24■■■■□ 3.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms