RNA–Protein interactions for RNA: ENST00000550767.5

TUBA1A-207, Transcript of tubulin alpha 1a, humanhuman

TSL 1 (best) BASIC

Gene TUBA1A, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-207ENST00000550767 NISCHQ9Y2I1 1504 aa28.82■■■□□ 2.2
TUBA1A-207ENST00000550767 CCDC180Q9P1Z9 1646 aa25.65■■□□□ 1.7
TUBA1A-207ENST00000550767 ABCC9O60706 1549 aa25.34■■□□□ 1.65
TUBA1A-207ENST00000550767 RB1CC1Q8TDY2 1594 aa24.24■■□□□ 1.47
TUBA1A-207ENST00000550767 NACADO15069 1562 aa24.13■■□□□ 1.45
TUBA1A-207ENST00000550767 ZCCHC6Q5VYS8 1495 aaKnown RBP24.06■■□□□ 1.44
TUBA1A-207ENST00000550767 DCAF8L2P0C7V8 631 aa24.01■■□□□ 1.43
TUBA1A-207ENST00000550767 MYO15BQ96JP2 1530 aa23.92■■□□□ 1.42
TUBA1A-207ENST00000550767 DCAF1Q9Y4B6 1507 aa23.87■■□□□ 1.41
TUBA1A-207ENST00000550767 DNAJC5BQ9UF47 199 aa23.71■■□□□ 1.39
TUBA1A-207ENST00000550767 UNC13AQ9UPW8 1703 aa23.7■■□□□ 1.38
TUBA1A-207ENST00000550767 PABPN1Q86U42 306 aaKnown RBP eCLIP23.62■■□□□ 1.37
TUBA1A-207ENST00000550767 BICRAQ9NZM4 1560 aa23.51■■□□□ 1.35
TUBA1A-207ENST00000550767 SCRIBQ14160 1630 aa23.38■■□□□ 1.33
TUBA1A-207ENST00000550767 SHROOM4Q9ULL8 1493 aa23.24■■□□□ 1.31
TUBA1A-207ENST00000550767 CC2D2AQ9P2K1 1620 aa22.92■■□□□ 1.26
TUBA1A-207ENST00000550767 EIF4G1Q04637 1599 aaKnown RBP22.92■■□□□ 1.26
TUBA1A-207ENST00000550767 CECR2Q9BXF3 1484 aa22.82■■□□□ 1.24
TUBA1A-207ENST00000550767 SMARCA4P51532 1647 aa22.38■■□□□ 1.17
TUBA1A-207ENST00000550767 BAZ1AQ9NRL2 1556 aaPredicted RBP22.36■■□□□ 1.17
TUBA1A-207ENST00000550767 NCAPD3P42695 1498 aa22.27■■□□□ 1.16
TUBA1A-207ENST00000550767 MROH2BQ7Z745 1585 aa22.22■■□□□ 1.15
TUBA1A-207ENST00000550767 ATAD2BQ9ULI0 1458 aa22.2■■□□□ 1.14
TUBA1A-207ENST00000550767 SMARCA2P51531 1590 aa22.19■■□□□ 1.14
TUBA1A-207ENST00000550767 PEG3Q9GZU2 1588 aa22.14■■□□□ 1.14
TUBA1A-207ENST00000550767 HMGXB3Q12766 1538 aa22.11■■□□□ 1.13
TUBA1A-207ENST00000550767 WIZO95785 1651 aa22.02■■□□□ 1.12
TUBA1A-207ENST00000550767 BAZ1BQ9UIG0 1483 aaKnown RBP22.02■■□□□ 1.12
TUBA1A-207ENST00000550767 RSF1Q96T23 1441 aaPredicted RBP21.99■■□□□ 1.11
TUBA1A-207ENST00000550767 ERCC6Q03468 1493 aa21.87■■□□□ 1.09
TUBA1A-207ENST00000550767 NESP48681 1621 aa21.82■■□□□ 1.08
TUBA1A-207ENST00000550767 CUX2O14529 1486 aa21.8■■□□□ 1.08
TUBA1A-207ENST00000550767 TOP2AP11388 1531 aaKnown RBP21.79■■□□□ 1.08
TUBA1A-207ENST00000550767 DNAJC5Q9H3Z4 198 aa21.76■■□□□ 1.07
TUBA1A-207ENST00000550767 LAMC3Q9Y6N6 1575 aa21.74■■□□□ 1.07
TUBA1A-207ENST00000550767 PDS5BQ9NTI5 1447 aa21.6■■□□□ 1.05
TUBA1A-207ENST00000550767 CADPSQ9ULU8 1353 aa21.59■■□□□ 1.05
TUBA1A-207ENST00000550767 THOC2Q8NI27 1593 aaKnown RBP21.57■■□□□ 1.04
TUBA1A-207ENST00000550767 KIF21AQ7Z4S6 1674 aa21.57■■□□□ 1.04
TUBA1A-207ENST00000550767 SUPT5HO00267 1087 aaKnown RBP21.54■■□□□ 1.04
TUBA1A-207ENST00000550767 CCDC88BA6NC98 1476 aa21.49■■□□□ 1.03
TUBA1A-207ENST00000550767 CFTRP13569 1480 aa21.4■■□□□ 1.02
TUBA1A-207ENST00000550767 MRC2Q9UBG0 1479 aa21.39■■□□□ 1.01
TUBA1A-207ENST00000550767 PRDM2Q13029 1718 aa21.38■■□□□ 1.01
TUBA1A-207ENST00000550767 CEP164Q9UPV0 1460 aa21.34■■□□□ 1.01
TUBA1A-207ENST00000550767 WDR62O43379 1518 aa21.34■■□□□ 1.01
TUBA1A-207ENST00000550767 FANCD2Q9BXW9 1451 aa21.33■■□□□ 1
TUBA1A-207ENST00000550767 URB2Q14146 1524 aaKnown RBP21.13■□□□□ 0.97
TUBA1A-207ENST00000550767 ABCC8Q09428 1581 aa20.96■□□□□ 0.95
TUBA1A-207ENST00000550767 DNMBPQ6XZF7 1577 aa20.96■□□□□ 0.95
TUBA1A-207ENST00000550767 TOPBP1Q92547 1522 aa20.95■□□□□ 0.94
TUBA1A-207ENST00000550767 IFT140Q96RY7 1462 aa20.92■□□□□ 0.94
TUBA1A-207ENST00000550767 TRIM41Q8WV44 630 aa20.86■□□□□ 0.93
TUBA1A-207ENST00000550767 OSCARQ8IYS5 282 aa20.85■□□□□ 0.93
TUBA1A-207ENST00000550767 CUX1P39880 1505 aa20.84■□□□□ 0.93
TUBA1A-207ENST00000550767 ZNF608Q9ULD9 1512 aaPredicted RBP20.84■□□□□ 0.93
TUBA1A-207ENST00000550767 POLA1P09884 1462 aaPredicted RBP20.78■□□□□ 0.92
TUBA1A-207ENST00000550767 WRNQ14191 1432 aaPredicted RBP eCLIP20.76■□□□□ 0.91
TUBA1A-207ENST00000550767 TARBP1Q13395 1621 aaKnown RBP20.76■□□□□ 0.91
TUBA1A-207ENST00000550767 FGD5Q6ZNL6 1462 aa20.75■□□□□ 0.91
TUBA1A-207ENST00000550767 BIVM-ERCC5R4GMW8 1640 aa20.75■□□□□ 0.91
TUBA1A-207ENST00000550767 EIF4G3O43432 1585 aaKnown RBP20.74■□□□□ 0.91
TUBA1A-207ENST00000550767 TOP2BQ02880 1626 aa20.73■□□□□ 0.91
TUBA1A-207ENST00000550767 SYNJ1O43426 1573 aa20.73■□□□□ 0.91
TUBA1A-207ENST00000550767 AQRO60306 1485 aaKnown RBP eCLIP20.69■□□□□ 0.9
TUBA1A-207ENST00000550767 SOGA1O94964 1423 aa20.68■□□□□ 0.9
TUBA1A-207ENST00000550767 RAD54L2Q9Y4B4 1467 aa20.66■□□□□ 0.9
TUBA1A-207ENST00000550767 WDR97A6NE52 1622 aa20.63■□□□□ 0.89
TUBA1A-207ENST00000550767 TDRD9Q8NDG6 1382 aaKnown RBP20.58■□□□□ 0.89
TUBA1A-207ENST00000550767 CHD1O14646 1710 aa20.56■□□□□ 0.88
TUBA1A-207ENST00000550767 ABCA10Q8WWZ4 1543 aa20.55■□□□□ 0.88
TUBA1A-207ENST00000550767 RIMBP3CA6NJZ7 1639 aa20.52■□□□□ 0.88
TUBA1A-207ENST00000550767 RIMBP3BA6NNM3 1639 aa20.52■□□□□ 0.88
TUBA1A-207ENST00000550767 RIMBP3Q9UFD9 1639 aa20.52■□□□□ 0.88
TUBA1A-207ENST00000550767 FBLN2P98095 1184 aa20.51■□□□□ 0.87
TUBA1A-207ENST00000550767 ABCA5Q8WWZ7 1642 aa20.5■□□□□ 0.87
TUBA1A-207ENST00000550767 PBRM1Q86U86 1689 aa20.48■□□□□ 0.87
TUBA1A-207ENST00000550767 ARHGEF11O15085 1522 aa20.47■□□□□ 0.87
TUBA1A-207ENST00000550767 GRIN2BQ13224 1484 aa20.46■□□□□ 0.87
TUBA1A-207ENST00000550767 SNAPC4Q5SXM2 1469 aa20.46■□□□□ 0.87
TUBA1A-207ENST00000550767 GAPVD1Q14C86 1478 aa20.46■□□□□ 0.87
TUBA1A-207ENST00000550767 MAGI1Q96QZ7 1491 aaPredicted RBP20.46■□□□□ 0.87
TUBA1A-207ENST00000550767 CHMP7Q8WUX9 453 aaPredicted RBP20.41■□□□□ 0.86
TUBA1A-207ENST00000550767 SYNJ2O15056 1496 aa20.38■□□□□ 0.85
TUBA1A-207ENST00000550767 ERICH3Q5RHP9 1530 aa20.33■□□□□ 0.84
TUBA1A-207ENST00000550767 CLASP1Q7Z460 1538 aa20.33■□□□□ 0.84
TUBA1A-207ENST00000550767 CYB5RLQ6IPT4 315 aa20.33■□□□□ 0.84
TUBA1A-207ENST00000550767 KIF27Q86VH2 1401 aa20.31■□□□□ 0.84
TUBA1A-207ENST00000550767 ADAMTS12P58397 1594 aa20.29■□□□□ 0.84
TUBA1A-207ENST00000550767 ARAP1Q96P48 1450 aa20.28■□□□□ 0.84
TUBA1A-207ENST00000550767 FHAD1B1AJZ9 1412 aa20.22■□□□□ 0.83
TUBA1A-207ENST00000550767 CUL7Q14999 1698 aa20.22■□□□□ 0.83
TUBA1A-207ENST00000550767 GRIN2AQ12879 1464 aa20.2■□□□□ 0.82
TUBA1A-207ENST00000550767 IGF1RP08069 1367 aa20.16■□□□□ 0.82
TUBA1A-207ENST00000550767 CHIC1Q5VXU3 224 aa20.16■□□□□ 0.82
TUBA1A-207ENST00000550767 RUSC2Q8N2Y8 1516 aa20.15■□□□□ 0.82
TUBA1A-207ENST00000550767 NUP160Q12769 1436 aa20.13■□□□□ 0.81
TUBA1A-207ENST00000550767 TRHP20396 242 aaPredicted RBP20.1■□□□□ 0.81
TUBA1A-207ENST00000550767 CEP170Q5SW79 1584 aa20.1■□□□□ 0.81
TUBA1A-207ENST00000550767 CARMIL1Q5VZK9 1371 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms