RNA–Protein interactions for RNA: ENST00000550762.1

PMEL-217, Transcript of premelanosome protein, humanhuman

TSL 1 (best)

Gene PMEL, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMEL-217ENST00000550762 NISCHQ9Y2I1 1504 aa31.97■■■□□ 2.71
PMEL-217ENST00000550762 CCDC180Q9P1Z9 1646 aa28.54■■■□□ 2.16
PMEL-217ENST00000550762 ABCC9O60706 1549 aa28.28■■■□□ 2.12
PMEL-217ENST00000550762 RB1CC1Q8TDY2 1594 aa27.07■■□□□ 1.92
PMEL-217ENST00000550762 NACADO15069 1562 aa26.97■■□□□ 1.91
PMEL-217ENST00000550762 DCAF8L2P0C7V8 631 aa26.89■■□□□ 1.9
PMEL-217ENST00000550762 MYO15BQ96JP2 1530 aa26.71■■□□□ 1.87
PMEL-217ENST00000550762 ZCCHC6Q5VYS8 1495 aaKnown RBP26.55■■□□□ 1.84
PMEL-217ENST00000550762 DCAF1Q9Y4B6 1507 aa26.46■■□□□ 1.83
PMEL-217ENST00000550762 PABPN1Q86U42 306 aaKnown RBP eCLIP26.38■■□□□ 1.81
PMEL-217ENST00000550762 UNC13AQ9UPW8 1703 aa26.31■■□□□ 1.8
PMEL-217ENST00000550762 DNAJC5BQ9UF47 199 aa26.25■■□□□ 1.79
PMEL-217ENST00000550762 BICRAQ9NZM4 1560 aa26.2■■□□□ 1.79
PMEL-217ENST00000550762 SCRIBQ14160 1630 aa26.01■■□□□ 1.75
PMEL-217ENST00000550762 SHROOM4Q9ULL8 1493 aa26■■□□□ 1.75
PMEL-217ENST00000550762 EIF4G1Q04637 1599 aaKnown RBP25.57■■□□□ 1.68
PMEL-217ENST00000550762 CC2D2AQ9P2K1 1620 aa25.54■■□□□ 1.68
PMEL-217ENST00000550762 CECR2Q9BXF3 1484 aa25.47■■□□□ 1.67
PMEL-217ENST00000550762 NCAPD3P42695 1498 aa24.89■■□□□ 1.58
PMEL-217ENST00000550762 SMARCA4P51532 1647 aa24.86■■□□□ 1.57
PMEL-217ENST00000550762 ATAD2BQ9ULI0 1458 aa24.84■■□□□ 1.57
PMEL-217ENST00000550762 BAZ1AQ9NRL2 1556 aaPredicted RBP24.82■■□□□ 1.56
PMEL-217ENST00000550762 SMARCA2P51531 1590 aa24.81■■□□□ 1.56
PMEL-217ENST00000550762 HMGXB3Q12766 1538 aa24.72■■□□□ 1.55
PMEL-217ENST00000550762 PEG3Q9GZU2 1588 aa24.63■■□□□ 1.53
PMEL-217ENST00000550762 BAZ1BQ9UIG0 1483 aaKnown RBP24.63■■□□□ 1.53
PMEL-217ENST00000550762 MROH2BQ7Z745 1585 aa24.61■■□□□ 1.53
PMEL-217ENST00000550762 ERCC6Q03468 1493 aa24.45■■□□□ 1.5
PMEL-217ENST00000550762 NESP48681 1621 aa24.35■■□□□ 1.49
PMEL-217ENST00000550762 CUX2O14529 1486 aa24.32■■□□□ 1.48
PMEL-217ENST00000550762 WIZO95785 1651 aa24.29■■□□□ 1.48
PMEL-217ENST00000550762 LAMC3Q9Y6N6 1575 aa24.27■■□□□ 1.48
PMEL-217ENST00000550762 RSF1Q96T23 1441 aaPredicted RBP24.23■■□□□ 1.47
PMEL-217ENST00000550762 PDS5BQ9NTI5 1447 aa24.17■■□□□ 1.46
PMEL-217ENST00000550762 CADPSQ9ULU8 1353 aa24.16■■□□□ 1.46
PMEL-217ENST00000550762 TOP2AP11388 1531 aaKnown RBP24.07■■□□□ 1.44
PMEL-217ENST00000550762 THOC2Q8NI27 1593 aaKnown RBP24.04■■□□□ 1.44
PMEL-217ENST00000550762 KIF21AQ7Z4S6 1674 aa24■■□□□ 1.43
PMEL-217ENST00000550762 DNAJC5Q9H3Z4 198 aa23.97■■□□□ 1.43
PMEL-217ENST00000550762 CFTRP13569 1480 aa23.94■■□□□ 1.42
PMEL-217ENST00000550762 MRC2Q9UBG0 1479 aa23.91■■□□□ 1.42
PMEL-217ENST00000550762 CEP164Q9UPV0 1460 aa23.87■■□□□ 1.41
PMEL-217ENST00000550762 FANCD2Q9BXW9 1451 aa23.87■■□□□ 1.41
PMEL-217ENST00000550762 WDR62O43379 1518 aa23.82■■□□□ 1.4
PMEL-217ENST00000550762 CCDC88BA6NC98 1476 aa23.79■■□□□ 1.4
PMEL-217ENST00000550762 URB2Q14146 1524 aaKnown RBP23.62■■□□□ 1.37
PMEL-217ENST00000550762 PRDM2Q13029 1718 aa23.62■■□□□ 1.37
PMEL-217ENST00000550762 ABCC8Q09428 1581 aa23.46■■□□□ 1.35
PMEL-217ENST00000550762 TOPBP1Q92547 1522 aa23.43■■□□□ 1.34
PMEL-217ENST00000550762 IFT140Q96RY7 1462 aa23.4■■□□□ 1.34
PMEL-217ENST00000550762 SUPT5HO00267 1087 aaKnown RBP23.38■■□□□ 1.33
PMEL-217ENST00000550762 DNMBPQ6XZF7 1577 aa23.37■■□□□ 1.33
PMEL-217ENST00000550762 ZNF608Q9ULD9 1512 aaPredicted RBP23.28■■□□□ 1.32
PMEL-217ENST00000550762 OSCARQ8IYS5 282 aa23.27■■□□□ 1.32
PMEL-217ENST00000550762 POLA1P09884 1462 aaPredicted RBP23.21■■□□□ 1.31
PMEL-217ENST00000550762 TARBP1Q13395 1621 aaKnown RBP23.16■■□□□ 1.3
PMEL-217ENST00000550762 EIF4G3O43432 1585 aaKnown RBP23.15■■□□□ 1.3
PMEL-217ENST00000550762 SOGA1O94964 1423 aa23.14■■□□□ 1.29
PMEL-217ENST00000550762 AQRO60306 1485 aaKnown RBP eCLIP23.11■■□□□ 1.29
PMEL-217ENST00000550762 CUX1P39880 1505 aa23.11■■□□□ 1.29
PMEL-217ENST00000550762 FGD5Q6ZNL6 1462 aa23.11■■□□□ 1.29
PMEL-217ENST00000550762 RAD54L2Q9Y4B4 1467 aa23.11■■□□□ 1.29
PMEL-217ENST00000550762 TDRD9Q8NDG6 1382 aaKnown RBP23.03■■□□□ 1.28
PMEL-217ENST00000550762 WDR97A6NE52 1622 aa23.02■■□□□ 1.28
PMEL-217ENST00000550762 TRIM41Q8WV44 630 aa23.02■■□□□ 1.28
PMEL-217ENST00000550762 FBLN2P98095 1184 aa22.95■■□□□ 1.26
PMEL-217ENST00000550762 GRIN2BQ13224 1484 aa22.92■■□□□ 1.26
PMEL-217ENST00000550762 SNAPC4Q5SXM2 1469 aa22.9■■□□□ 1.26
PMEL-217ENST00000550762 MAGI1Q96QZ7 1491 aaPredicted RBP22.89■■□□□ 1.25
PMEL-217ENST00000550762 CHD1O14646 1710 aa22.88■■□□□ 1.25
PMEL-217ENST00000550762 ABCA10Q8WWZ4 1543 aa22.88■■□□□ 1.25
PMEL-217ENST00000550762 WRNQ14191 1432 aaPredicted RBP eCLIP22.88■■□□□ 1.25
PMEL-217ENST00000550762 GAPVD1Q14C86 1478 aa22.85■■□□□ 1.25
PMEL-217ENST00000550762 CHMP7Q8WUX9 453 aaPredicted RBP22.85■■□□□ 1.25
PMEL-217ENST00000550762 ARHGEF11O15085 1522 aa22.83■■□□□ 1.25
PMEL-217ENST00000550762 RIMBP3CA6NJZ7 1639 aa22.83■■□□□ 1.25
PMEL-217ENST00000550762 RIMBP3BA6NNM3 1639 aa22.83■■□□□ 1.25
PMEL-217ENST00000550762 RIMBP3Q9UFD9 1639 aa22.83■■□□□ 1.25
PMEL-217ENST00000550762 TOP2BQ02880 1626 aa22.82■■□□□ 1.24
PMEL-217ENST00000550762 BIVM-ERCC5R4GMW8 1640 aa22.8■■□□□ 1.24
PMEL-217ENST00000550762 SYNJ2O15056 1496 aa22.79■■□□□ 1.24
PMEL-217ENST00000550762 ABCA5Q8WWZ7 1642 aa22.78■■□□□ 1.24
PMEL-217ENST00000550762 SYNJ1O43426 1573 aa22.77■■□□□ 1.24
PMEL-217ENST00000550762 PBRM1Q86U86 1689 aa22.74■■□□□ 1.23
PMEL-217ENST00000550762 CLASP1Q7Z460 1538 aa22.69■■□□□ 1.22
PMEL-217ENST00000550762 CYB5RLQ6IPT4 315 aa22.68■■□□□ 1.22
PMEL-217ENST00000550762 ARAP1Q96P48 1450 aa22.62■■□□□ 1.21
PMEL-217ENST00000550762 FHAD1B1AJZ9 1412 aa22.6■■□□□ 1.21
PMEL-217ENST00000550762 ERICH3Q5RHP9 1530 aa22.6■■□□□ 1.21
PMEL-217ENST00000550762 GRIN2AQ12879 1464 aa22.6■■□□□ 1.21
PMEL-217ENST00000550762 ADAMTS12P58397 1594 aa22.59■■□□□ 1.21
PMEL-217ENST00000550762 NUP160Q12769 1436 aa22.52■■□□□ 1.2
PMEL-217ENST00000550762 CEP170Q5SW79 1584 aa22.46■■□□□ 1.19
PMEL-217ENST00000550762 KIF27Q86VH2 1401 aa22.45■■□□□ 1.18
PMEL-217ENST00000550762 IGF1RP08069 1367 aa22.38■■□□□ 1.17
PMEL-217ENST00000550762 TRHP20396 242 aaPredicted RBP22.35■■□□□ 1.17
PMEL-217ENST00000550762 SHROOM2Q13796 1616 aa22.34■■□□□ 1.17
PMEL-217ENST00000550762 ERCC6L2Q5T890 1561 aa22.31■■□□□ 1.16
PMEL-217ENST00000550762 JPH4Q96JJ6 628 aa22.31■■□□□ 1.16
PMEL-217ENST00000550762 CUL7Q14999 1698 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms