RNA–Protein interactions for RNA: ENST00000550711.1

CHST11-206, Transcript of carbohydrate sulfotransferase 11, humanhuman

TSL 4

Gene CHST11, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHST11-206ENST00000550711 NISCHQ9Y2I1 1504 aa33.49■■■□□ 2.95
CHST11-206ENST00000550711 ABCC9O60706 1549 aa30.87■■■□□ 2.53
CHST11-206ENST00000550711 CCDC180Q9P1Z9 1646 aa30.33■■■□□ 2.45
CHST11-206ENST00000550711 DNAJC5BQ9UF47 199 aa29.59■■■□□ 2.33
CHST11-206ENST00000550711 RB1CC1Q8TDY2 1594 aa29.05■■■□□ 2.24
CHST11-206ENST00000550711 NACADO15069 1562 aa28.72■■■□□ 2.19
CHST11-206ENST00000550711 UNC13AQ9UPW8 1703 aa28.65■■■□□ 2.18
CHST11-206ENST00000550711 PABPN1Q86U42 306 aaKnown RBP eCLIP28.59■■■□□ 2.17
CHST11-206ENST00000550711 BICRAQ9NZM4 1560 aa28.46■■■□□ 2.15
CHST11-206ENST00000550711 DCAF8L2P0C7V8 631 aa28.24■■■□□ 2.11
CHST11-206ENST00000550711 MYO15BQ96JP2 1530 aa28.17■■■□□ 2.1
CHST11-206ENST00000550711 CC2D2AQ9P2K1 1620 aa27.9■■■□□ 2.06
CHST11-206ENST00000550711 CECR2Q9BXF3 1484 aa27.83■■■□□ 2.05
CHST11-206ENST00000550711 SHROOM4Q9ULL8 1493 aa27.78■■■□□ 2.04
CHST11-206ENST00000550711 EIF4G1Q04637 1599 aaKnown RBP27.69■■■□□ 2.02
CHST11-206ENST00000550711 ZCCHC6Q5VYS8 1495 aaKnown RBP27.69■■■□□ 2.02
CHST11-206ENST00000550711 SCRIBQ14160 1630 aa27.61■■■□□ 2.01
CHST11-206ENST00000550711 DCAF1Q9Y4B6 1507 aa27.61■■■□□ 2.01
CHST11-206ENST00000550711 DNAJC5Q9H3Z4 198 aa27.42■■□□□ 1.98
CHST11-206ENST00000550711 CUX2O14529 1486 aa26.77■■□□□ 1.88
CHST11-206ENST00000550711 NCAPD3P42695 1498 aa26.56■■□□□ 1.84
CHST11-206ENST00000550711 ERCC6Q03468 1493 aa26.55■■□□□ 1.84
CHST11-206ENST00000550711 NESP48681 1621 aa26.44■■□□□ 1.82
CHST11-206ENST00000550711 ATAD2BQ9ULI0 1458 aa26.42■■□□□ 1.82
CHST11-206ENST00000550711 HMGXB3Q12766 1538 aa26.34■■□□□ 1.81
CHST11-206ENST00000550711 THOC2Q8NI27 1593 aaKnown RBP26.33■■□□□ 1.8
CHST11-206ENST00000550711 SMARCA4P51532 1647 aa26.29■■□□□ 1.8
CHST11-206ENST00000550711 SMARCA2P51531 1590 aa26.23■■□□□ 1.79
CHST11-206ENST00000550711 KIF21AQ7Z4S6 1674 aa26.09■■□□□ 1.77
CHST11-206ENST00000550711 BAZ1BQ9UIG0 1483 aaKnown RBP26.06■■□□□ 1.76
CHST11-206ENST00000550711 PEG3Q9GZU2 1588 aa26.05■■□□□ 1.76
CHST11-206ENST00000550711 LAMC3Q9Y6N6 1575 aa26.03■■□□□ 1.76
CHST11-206ENST00000550711 BAZ1AQ9NRL2 1556 aaPredicted RBP25.97■■□□□ 1.75
CHST11-206ENST00000550711 TRIM41Q8WV44 630 aa25.89■■□□□ 1.74
CHST11-206ENST00000550711 MROH2BQ7Z745 1585 aa25.87■■□□□ 1.73
CHST11-206ENST00000550711 PDS5BQ9NTI5 1447 aa25.79■■□□□ 1.72
CHST11-206ENST00000550711 WDR62O43379 1518 aa25.75■■□□□ 1.71
CHST11-206ENST00000550711 MRC2Q9UBG0 1479 aa25.72■■□□□ 1.71
CHST11-206ENST00000550711 CADPSQ9ULU8 1353 aa25.67■■□□□ 1.7
CHST11-206ENST00000550711 WIZO95785 1651 aa25.54■■□□□ 1.68
CHST11-206ENST00000550711 CEP164Q9UPV0 1460 aa25.46■■□□□ 1.67
CHST11-206ENST00000550711 FANCD2Q9BXW9 1451 aa25.41■■□□□ 1.66
CHST11-206ENST00000550711 URB2Q14146 1524 aaKnown RBP25.35■■□□□ 1.65
CHST11-206ENST00000550711 CFTRP13569 1480 aa25.32■■□□□ 1.64
CHST11-206ENST00000550711 OSCARQ8IYS5 282 aa25.31■■□□□ 1.64
CHST11-206ENST00000550711 RIMBP3CA6NJZ7 1639 aa25.3■■□□□ 1.64
CHST11-206ENST00000550711 RIMBP3BA6NNM3 1639 aa25.3■■□□□ 1.64
CHST11-206ENST00000550711 RIMBP3Q9UFD9 1639 aa25.3■■□□□ 1.64
CHST11-206ENST00000550711 ZNF608Q9ULD9 1512 aaPredicted RBP25.14■■□□□ 1.62
CHST11-206ENST00000550711 ARHGEF11O15085 1522 aa25.13■■□□□ 1.61
CHST11-206ENST00000550711 TOP2AP11388 1531 aaKnown RBP25.11■■□□□ 1.61
CHST11-206ENST00000550711 PRDM2Q13029 1718 aa25.09■■□□□ 1.61
CHST11-206ENST00000550711 RSF1Q96T23 1441 aaPredicted RBP25.06■■□□□ 1.6
CHST11-206ENST00000550711 IFT140Q96RY7 1462 aa24.96■■□□□ 1.59
CHST11-206ENST00000550711 EIF4G3O43432 1585 aaKnown RBP24.96■■□□□ 1.59
CHST11-206ENST00000550711 TOPBP1Q92547 1522 aa24.91■■□□□ 1.58
CHST11-206ENST00000550711 CHD1O14646 1710 aa24.9■■□□□ 1.58
CHST11-206ENST00000550711 ARAP1Q96P48 1450 aa24.89■■□□□ 1.57
CHST11-206ENST00000550711 CCDC88BA6NC98 1476 aa24.83■■□□□ 1.56
CHST11-206ENST00000550711 TARBP1Q13395 1621 aaKnown RBP24.82■■□□□ 1.56
CHST11-206ENST00000550711 CYB5RLQ6IPT4 315 aa24.81■■□□□ 1.56
CHST11-206ENST00000550711 AQRO60306 1485 aaKnown RBP eCLIP24.76■■□□□ 1.55
CHST11-206ENST00000550711 DNMBPQ6XZF7 1577 aa24.76■■□□□ 1.55
CHST11-206ENST00000550711 POLA1P09884 1462 aaPredicted RBP24.64■■□□□ 1.53
CHST11-206ENST00000550711 ABCC8Q09428 1581 aa24.63■■□□□ 1.53
CHST11-206ENST00000550711 TRHP20396 242 aaPredicted RBP24.62■■□□□ 1.53
CHST11-206ENST00000550711 CLASP1Q7Z460 1538 aa24.61■■□□□ 1.53
CHST11-206ENST00000550711 RAD54L2Q9Y4B4 1467 aa24.57■■□□□ 1.52
CHST11-206ENST00000550711 FBLN2P98095 1184 aa24.5■■□□□ 1.51
CHST11-206ENST00000550711 SNAPC4Q5SXM2 1469 aa24.49■■□□□ 1.51
CHST11-206ENST00000550711 TDRD9Q8NDG6 1382 aaKnown RBP24.48■■□□□ 1.51
CHST11-206ENST00000550711 SOGA1O94964 1423 aa24.39■■□□□ 1.5
CHST11-206ENST00000550711 FGD5Q6ZNL6 1462 aa24.38■■□□□ 1.49
CHST11-206ENST00000550711 WDR97A6NE52 1622 aa24.37■■□□□ 1.49
CHST11-206ENST00000550711 SYNJ1O43426 1573 aa24.37■■□□□ 1.49
CHST11-206ENST00000550711 MAGI1Q96QZ7 1491 aaPredicted RBP24.33■■□□□ 1.49
CHST11-206ENST00000550711 CUX1P39880 1505 aa24.33■■□□□ 1.49
CHST11-206ENST00000550711 SYNJ2O15056 1496 aa24.28■■□□□ 1.48
CHST11-206ENST00000550711 GRIN2BQ13224 1484 aa24.26■■□□□ 1.47
CHST11-206ENST00000550711 GAPVD1Q14C86 1478 aa24.26■■□□□ 1.47
CHST11-206ENST00000550711 PBRM1Q86U86 1689 aa24.26■■□□□ 1.47
CHST11-206ENST00000550711 ERCC6L2Q5T890 1561 aa24.25■■□□□ 1.47
CHST11-206ENST00000550711 AEBP2Q6ZN18 517 aaPredicted RBP24.24■■□□□ 1.47
CHST11-206ENST00000550711 CHMP7Q8WUX9 453 aaPredicted RBP24.21■■□□□ 1.47
CHST11-206ENST00000550711 ABCA5Q8WWZ7 1642 aa24.17■■□□□ 1.46
CHST11-206ENST00000550711 KIF13AQ9H1H9 1805 aa24.05■■□□□ 1.44
CHST11-206ENST00000550711 ABCA10Q8WWZ4 1543 aa24.05■■□□□ 1.44
CHST11-206ENST00000550711 CEP170Q5SW79 1584 aa24.05■■□□□ 1.44
CHST11-206ENST00000550711 SHROOM2Q13796 1616 aa24.02■■□□□ 1.44
CHST11-206ENST00000550711 GRIN2AQ12879 1464 aa24.01■■□□□ 1.43
CHST11-206ENST00000550711 ADAMTS12P58397 1594 aa24■■□□□ 1.43
CHST11-206ENST00000550711 NUP160Q12769 1436 aa23.99■■□□□ 1.43
CHST11-206ENST00000550711 BIVM-ERCC5R4GMW8 1640 aa23.77■■□□□ 1.4
CHST11-206ENST00000550711 FHAD1B1AJZ9 1412 aa23.76■■□□□ 1.39
CHST11-206ENST00000550711 TOP2BQ02880 1626 aa23.73■■□□□ 1.39
CHST11-206ENST00000550711 WRNQ14191 1432 aaPredicted RBP eCLIP23.73■■□□□ 1.39
CHST11-206ENST00000550711 PRG4Q92954 1404 aaPredicted RBP23.72■■□□□ 1.39
CHST11-206ENST00000550711 DIP2BQ9P265 1576 aa23.71■■□□□ 1.39
CHST11-206ENST00000550711 ERICH3Q5RHP9 1530 aa23.71■■□□□ 1.39
CHST11-206ENST00000550711 ABCC10Q5T3U5 1492 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms