RNA–Protein interactions for RNA: ENST00000550692.1

BRF1-218, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-218ENST00000550692 NISCHQ9Y2I1 1504 aa27.49■■□□□ 1.99
BRF1-218ENST00000550692 CCDC180Q9P1Z9 1646 aa24.44■■□□□ 1.5
BRF1-218ENST00000550692 ABCC9O60706 1549 aa24.1■■□□□ 1.45
BRF1-218ENST00000550692 DCAF8L2P0C7V8 631 aa23.1■■□□□ 1.29
BRF1-218ENST00000550692 RB1CC1Q8TDY2 1594 aa23.08■■□□□ 1.29
BRF1-218ENST00000550692 NACADO15069 1562 aa23.02■■□□□ 1.28
BRF1-218ENST00000550692 ZCCHC6Q5VYS8 1495 aaKnown RBP22.86■■□□□ 1.25
BRF1-218ENST00000550692 MYO15BQ96JP2 1530 aa22.83■■□□□ 1.25
BRF1-218ENST00000550692 DCAF1Q9Y4B6 1507 aa22.7■■□□□ 1.22
BRF1-218ENST00000550692 DNAJC5BQ9UF47 199 aa22.63■■□□□ 1.21
BRF1-218ENST00000550692 UNC13AQ9UPW8 1703 aa22.58■■□□□ 1.21
BRF1-218ENST00000550692 PABPN1Q86U42 306 aaKnown RBP eCLIP22.54■■□□□ 1.2
BRF1-218ENST00000550692 BICRAQ9NZM4 1560 aa22.42■■□□□ 1.18
BRF1-218ENST00000550692 SCRIBQ14160 1630 aa22.35■■□□□ 1.17
BRF1-218ENST00000550692 SHROOM4Q9ULL8 1493 aa22.09■■□□□ 1.13
BRF1-218ENST00000550692 EIF4G1Q04637 1599 aaKnown RBP21.82■■□□□ 1.08
BRF1-218ENST00000550692 CC2D2AQ9P2K1 1620 aa21.77■■□□□ 1.08
BRF1-218ENST00000550692 CECR2Q9BXF3 1484 aa21.65■■□□□ 1.06
BRF1-218ENST00000550692 SMARCA4P51532 1647 aa21.35■■□□□ 1.01
BRF1-218ENST00000550692 BAZ1AQ9NRL2 1556 aaPredicted RBP21.29■■□□□ 1
BRF1-218ENST00000550692 ATAD2BQ9ULI0 1458 aa21.28■■□□□ 1
BRF1-218ENST00000550692 NCAPD3P42695 1498 aa21.27■■□□□ 1
BRF1-218ENST00000550692 SMARCA2P51531 1590 aa21.21■□□□□ 0.99
BRF1-218ENST00000550692 MROH2BQ7Z745 1585 aa21.21■□□□□ 0.99
BRF1-218ENST00000550692 HMGXB3Q12766 1538 aa21.13■□□□□ 0.97
BRF1-218ENST00000550692 PEG3Q9GZU2 1588 aa21.12■□□□□ 0.97
BRF1-218ENST00000550692 BAZ1BQ9UIG0 1483 aaKnown RBP21.08■□□□□ 0.97
BRF1-218ENST00000550692 WIZO95785 1651 aa20.96■□□□□ 0.95
BRF1-218ENST00000550692 RSF1Q96T23 1441 aaPredicted RBP20.92■□□□□ 0.94
BRF1-218ENST00000550692 NESP48681 1621 aa20.84■□□□□ 0.93
BRF1-218ENST00000550692 DNAJC5Q9H3Z4 198 aa20.77■□□□□ 0.92
BRF1-218ENST00000550692 ERCC6Q03468 1493 aa20.75■□□□□ 0.91
BRF1-218ENST00000550692 LAMC3Q9Y6N6 1575 aa20.71■□□□□ 0.91
BRF1-218ENST00000550692 TOP2AP11388 1531 aaKnown RBP20.7■□□□□ 0.9
BRF1-218ENST00000550692 CADPSQ9ULU8 1353 aa20.66■□□□□ 0.9
BRF1-218ENST00000550692 CUX2O14529 1486 aa20.6■□□□□ 0.89
BRF1-218ENST00000550692 PDS5BQ9NTI5 1447 aa20.59■□□□□ 0.89
BRF1-218ENST00000550692 KIF21AQ7Z4S6 1674 aa20.54■□□□□ 0.88
BRF1-218ENST00000550692 THOC2Q8NI27 1593 aaKnown RBP20.5■□□□□ 0.87
BRF1-218ENST00000550692 CCDC88BA6NC98 1476 aa20.5■□□□□ 0.87
BRF1-218ENST00000550692 CFTRP13569 1480 aa20.5■□□□□ 0.87
BRF1-218ENST00000550692 FANCD2Q9BXW9 1451 aa20.42■□□□□ 0.86
BRF1-218ENST00000550692 MRC2Q9UBG0 1479 aa20.38■□□□□ 0.85
BRF1-218ENST00000550692 CEP164Q9UPV0 1460 aa20.38■□□□□ 0.85
BRF1-218ENST00000550692 SUPT5HO00267 1087 aaKnown RBP20.35■□□□□ 0.85
BRF1-218ENST00000550692 WDR62O43379 1518 aa20.32■□□□□ 0.84
BRF1-218ENST00000550692 PRDM2Q13029 1718 aa20.29■□□□□ 0.84
BRF1-218ENST00000550692 URB2Q14146 1524 aaKnown RBP20.22■□□□□ 0.83
BRF1-218ENST00000550692 TOPBP1Q92547 1522 aa20.08■□□□□ 0.81
BRF1-218ENST00000550692 ABCC8Q09428 1581 aa20.04■□□□□ 0.8
BRF1-218ENST00000550692 DNMBPQ6XZF7 1577 aa20.02■□□□□ 0.8
BRF1-218ENST00000550692 IFT140Q96RY7 1462 aa19.96■□□□□ 0.79
BRF1-218ENST00000550692 ZNF608Q9ULD9 1512 aaPredicted RBP19.92■□□□□ 0.78
BRF1-218ENST00000550692 POLA1P09884 1462 aaPredicted RBP19.9■□□□□ 0.78
BRF1-218ENST00000550692 CUX1P39880 1505 aa19.89■□□□□ 0.77
BRF1-218ENST00000550692 TARBP1Q13395 1621 aaKnown RBP19.86■□□□□ 0.77
BRF1-218ENST00000550692 RAD54L2Q9Y4B4 1467 aa19.85■□□□□ 0.77
BRF1-218ENST00000550692 TRIM41Q8WV44 630 aa19.84■□□□□ 0.77
BRF1-218ENST00000550692 FGD5Q6ZNL6 1462 aa19.84■□□□□ 0.77
BRF1-218ENST00000550692 SOGA1O94964 1423 aa19.83■□□□□ 0.76
BRF1-218ENST00000550692 AQRO60306 1485 aaKnown RBP eCLIP19.8■□□□□ 0.763e-6■■□□□ 13.8
BRF1-218ENST00000550692 EIF4G3O43432 1585 aaKnown RBP19.8■□□□□ 0.76
BRF1-218ENST00000550692 TDRD9Q8NDG6 1382 aaKnown RBP19.75■□□□□ 0.75
BRF1-218ENST00000550692 OSCARQ8IYS5 282 aa19.74■□□□□ 0.75
BRF1-218ENST00000550692 WRNQ14191 1432 aaPredicted RBP eCLIP19.71■□□□□ 0.75
BRF1-218ENST00000550692 SYNJ1O43426 1573 aa19.68■□□□□ 0.74
BRF1-218ENST00000550692 TOP2BQ02880 1626 aa19.66■□□□□ 0.74
BRF1-218ENST00000550692 BIVM-ERCC5R4GMW8 1640 aa19.65■□□□□ 0.74
BRF1-218ENST00000550692 WDR97A6NE52 1622 aa19.65■□□□□ 0.74
BRF1-218ENST00000550692 ABCA10Q8WWZ4 1543 aa19.62■□□□□ 0.73
BRF1-218ENST00000550692 FBLN2P98095 1184 aa19.6■□□□□ 0.73
BRF1-218ENST00000550692 GRIN2BQ13224 1484 aa19.59■□□□□ 0.73
BRF1-218ENST00000550692 GAPVD1Q14C86 1478 aa19.59■□□□□ 0.73
BRF1-218ENST00000550692 SNAPC4Q5SXM2 1469 aa19.59■□□□□ 0.73
BRF1-218ENST00000550692 CHD1O14646 1710 aa19.58■□□□□ 0.72
BRF1-218ENST00000550692 ABCA5Q8WWZ7 1642 aa19.54■□□□□ 0.72
BRF1-218ENST00000550692 MAGI1Q96QZ7 1491 aaPredicted RBP19.54■□□□□ 0.72
BRF1-218ENST00000550692 PBRM1Q86U86 1689 aa19.52■□□□□ 0.72
BRF1-218ENST00000550692 CHMP7Q8WUX9 453 aaPredicted RBP19.51■□□□□ 0.71
BRF1-218ENST00000550692 SYNJ2O15056 1496 aa19.47■□□□□ 0.71
BRF1-218ENST00000550692 RIMBP3CA6NJZ7 1639 aa19.43■□□□□ 0.7
BRF1-218ENST00000550692 RIMBP3BA6NNM3 1639 aa19.43■□□□□ 0.7
BRF1-218ENST00000550692 RIMBP3Q9UFD9 1639 aa19.43■□□□□ 0.7
BRF1-218ENST00000550692 ARHGEF11O15085 1522 aa19.4■□□□□ 0.7
BRF1-218ENST00000550692 ADAMTS12P58397 1594 aa19.37■□□□□ 0.69
BRF1-218ENST00000550692 ERICH3Q5RHP9 1530 aa19.37■□□□□ 0.69
BRF1-218ENST00000550692 CLASP1Q7Z460 1538 aa19.36■□□□□ 0.69
BRF1-218ENST00000550692 FHAD1B1AJZ9 1412 aa19.34■□□□□ 0.69
BRF1-218ENST00000550692 GRIN2AQ12879 1464 aa19.34■□□□□ 0.69
BRF1-218ENST00000550692 KIF27Q86VH2 1401 aa19.31■□□□□ 0.68
BRF1-218ENST00000550692 CYB5RLQ6IPT4 315 aa19.28■□□□□ 0.68
BRF1-218ENST00000550692 IGF1RP08069 1367 aa19.27■□□□□ 0.68
BRF1-218ENST00000550692 NUP160Q12769 1436 aa19.26■□□□□ 0.67
BRF1-218ENST00000550692 CEP170Q5SW79 1584 aa19.25■□□□□ 0.67
BRF1-218ENST00000550692 ARAP1Q96P48 1450 aa19.24■□□□□ 0.67
BRF1-218ENST00000550692 CUL7Q14999 1698 aa19.16■□□□□ 0.66
BRF1-218ENST00000550692 RUSC2Q8N2Y8 1516 aa19.15■□□□□ 0.66
BRF1-218ENST00000550692 CARMIL1Q5VZK9 1371 aa19.15■□□□□ 0.66
BRF1-218ENST00000550692 ERCC6L2Q5T890 1561 aa19.13■□□□□ 0.65
BRF1-218ENST00000550692 SHROOM2Q13796 1616 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms