RNA–Protein interactions for RNA: ENST00000550651.5

RACGAP1-220, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 4

Gene RACGAP1, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-220ENST00000550651 NISCHQ9Y2I1 1504 aa40.96■■■■■ 4.15
RACGAP1-220ENST00000550651 ABCC9O60706 1549 aa37.06■■■■□ 3.52
RACGAP1-220ENST00000550651 CCDC180Q9P1Z9 1646 aa36.84■■■■□ 3.49
RACGAP1-220ENST00000550651 RB1CC1Q8TDY2 1594 aa35.19■■■■□ 3.22
RACGAP1-220ENST00000550651 DNAJC5BQ9UF47 199 aa35.01■■■■□ 3.2
RACGAP1-220ENST00000550651 NACADO15069 1562 aa34.9■■■■□ 3.18
RACGAP1-220ENST00000550651 DCAF8L2P0C7V8 631 aa34.64■■■■□ 3.14
RACGAP1-220ENST00000550651 PABPN1Q86U42 306 aaKnown RBP eCLIP34.48■■■■□ 3.11
RACGAP1-220ENST00000550651 UNC13AQ9UPW8 1703 aa34.37■■■■□ 3.09
RACGAP1-220ENST00000550651 MYO15BQ96JP2 1530 aa34.36■■■■□ 3.09
RACGAP1-220ENST00000550651 BICRAQ9NZM4 1560 aa34.19■■■■□ 3.06
RACGAP1-220ENST00000550651 ZCCHC6Q5VYS8 1495 aaKnown RBP33.88■■■■□ 3.01
RACGAP1-220ENST00000550651 DCAF1Q9Y4B6 1507 aa33.84■■■■□ 3.01
RACGAP1-220ENST00000550651 SHROOM4Q9ULL8 1493 aa33.7■■■□□ 2.99
RACGAP1-220ENST00000550651 SCRIBQ14160 1630 aa33.53■■■□□ 2.96
RACGAP1-220ENST00000550651 CC2D2AQ9P2K1 1620 aa33.47■■■□□ 2.95
RACGAP1-220ENST00000550651 CECR2Q9BXF3 1484 aa33.43■■■□□ 2.94
RACGAP1-220ENST00000550651 EIF4G1Q04637 1599 aaKnown RBP33.35■■■□□ 2.93
RACGAP1-220ENST00000550651 DNAJC5Q9H3Z4 198 aa32.33■■■□□ 2.77
RACGAP1-220ENST00000550651 NCAPD3P42695 1498 aa32.24■■■□□ 2.75
RACGAP1-220ENST00000550651 ATAD2BQ9ULI0 1458 aa32.1■■■□□ 2.73
RACGAP1-220ENST00000550651 CUX2O14529 1486 aa32.06■■■□□ 2.72
RACGAP1-220ENST00000550651 ERCC6Q03468 1493 aa32■■■□□ 2.71
RACGAP1-220ENST00000550651 SMARCA4P51532 1647 aa31.98■■■□□ 2.71
RACGAP1-220ENST00000550651 SMARCA2P51531 1590 aa31.98■■■□□ 2.71
RACGAP1-220ENST00000550651 HMGXB3Q12766 1538 aa31.96■■■□□ 2.71
RACGAP1-220ENST00000550651 BAZ1AQ9NRL2 1556 aaPredicted RBP31.8■■■□□ 2.68
RACGAP1-220ENST00000550651 NESP48681 1621 aa31.78■■■□□ 2.68
RACGAP1-220ENST00000550651 BAZ1BQ9UIG0 1483 aaKnown RBP31.75■■■□□ 2.67
RACGAP1-220ENST00000550651 PEG3Q9GZU2 1588 aa31.7■■■□□ 2.67
RACGAP1-220ENST00000550651 MROH2BQ7Z745 1585 aa31.55■■■□□ 2.64
RACGAP1-220ENST00000550651 LAMC3Q9Y6N6 1575 aa31.53■■■□□ 2.64
RACGAP1-220ENST00000550651 THOC2Q8NI27 1593 aaKnown RBP31.51■■■□□ 2.63
RACGAP1-220ENST00000550651 PDS5BQ9NTI5 1447 aa31.35■■■□□ 2.61
RACGAP1-220ENST00000550651 KIF21AQ7Z4S6 1674 aa31.35■■■□□ 2.61
RACGAP1-220ENST00000550651 CADPSQ9ULU8 1353 aa31.24■■■□□ 2.59
RACGAP1-220ENST00000550651 WIZO95785 1651 aa31.15■■■□□ 2.58
RACGAP1-220ENST00000550651 MRC2Q9UBG0 1479 aa31.09■■■□□ 2.57
RACGAP1-220ENST00000550651 WDR62O43379 1518 aa31.03■■■□□ 2.56
RACGAP1-220ENST00000550651 CEP164Q9UPV0 1460 aa30.91■■■□□ 2.54
RACGAP1-220ENST00000550651 FANCD2Q9BXW9 1451 aa30.87■■■□□ 2.53
RACGAP1-220ENST00000550651 CFTRP13569 1480 aa30.83■■■□□ 2.53
RACGAP1-220ENST00000550651 RSF1Q96T23 1441 aaPredicted RBP30.81■■■□□ 2.52
RACGAP1-220ENST00000550651 TRIM41Q8WV44 630 aa30.77■■■□□ 2.52
RACGAP1-220ENST00000550651 TOP2AP11388 1531 aaKnown RBP30.74■■■□□ 2.51
RACGAP1-220ENST00000550651 URB2Q14146 1524 aaKnown RBP30.63■■■□□ 2.49
RACGAP1-220ENST00000550651 OSCARQ8IYS5 282 aa30.56■■■□□ 2.48
RACGAP1-220ENST00000550651 PRDM2Q13029 1718 aa30.46■■■□□ 2.47
RACGAP1-220ENST00000550651 CCDC88BA6NC98 1476 aa30.41■■■□□ 2.46
RACGAP1-220ENST00000550651 IFT140Q96RY7 1462 aa30.31■■■□□ 2.44
RACGAP1-220ENST00000550651 ZNF608Q9ULD9 1512 aaPredicted RBP30.29■■■□□ 2.44
RACGAP1-220ENST00000550651 TOPBP1Q92547 1522 aa30.26■■■□□ 2.43
RACGAP1-220ENST00000550651 ABCC8Q09428 1581 aa30.19■■■□□ 2.42
RACGAP1-220ENST00000550651 RIMBP3CA6NJZ7 1639 aa30.17■■■□□ 2.42
RACGAP1-220ENST00000550651 RIMBP3BA6NNM3 1639 aa30.17■■■□□ 2.42
RACGAP1-220ENST00000550651 RIMBP3Q9UFD9 1639 aa30.17■■■□□ 2.42
RACGAP1-220ENST00000550651 DNMBPQ6XZF7 1577 aa30.12■■■□□ 2.41
RACGAP1-220ENST00000550651 EIF4G3O43432 1585 aaKnown RBP30.1■■■□□ 2.41
RACGAP1-220ENST00000550651 ARHGEF11O15085 1522 aa30.06■■■□□ 2.4
RACGAP1-220ENST00000550651 TARBP1Q13395 1621 aaKnown RBP30.02■■■□□ 2.4
RACGAP1-220ENST00000550651 AQRO60306 1485 aaKnown RBP eCLIP29.99■■■□□ 2.39
RACGAP1-220ENST00000550651 POLA1P09884 1462 aaPredicted RBP29.93■■■□□ 2.38
RACGAP1-220ENST00000550651 CHD1O14646 1710 aa29.91■■■□□ 2.38
RACGAP1-220ENST00000550651 CYB5RLQ6IPT4 315 aa29.85■■■□□ 2.37
RACGAP1-220ENST00000550651 RAD54L2Q9Y4B4 1467 aa29.83■■■□□ 2.37
RACGAP1-220ENST00000550651 FBLN2P98095 1184 aa29.82■■■□□ 2.36
RACGAP1-220ENST00000550651 SOGA1O94964 1423 aa29.79■■■□□ 2.36
RACGAP1-220ENST00000550651 TDRD9Q8NDG6 1382 aaKnown RBP29.77■■■□□ 2.36
RACGAP1-220ENST00000550651 ARAP1Q96P48 1450 aa29.74■■■□□ 2.35
RACGAP1-220ENST00000550651 FGD5Q6ZNL6 1462 aa29.71■■■□□ 2.35
RACGAP1-220ENST00000550651 WDR97A6NE52 1622 aa29.69■■■□□ 2.34
RACGAP1-220ENST00000550651 SNAPC4Q5SXM2 1469 aa29.66■■■□□ 2.34
RACGAP1-220ENST00000550651 CUX1P39880 1505 aa29.65■■■□□ 2.34
RACGAP1-220ENST00000550651 CLASP1Q7Z460 1538 aa29.6■■■□□ 2.33
RACGAP1-220ENST00000550651 MAGI1Q96QZ7 1491 aaPredicted RBP29.59■■■□□ 2.33
RACGAP1-220ENST00000550651 CHMP7Q8WUX9 453 aaPredicted RBP29.58■■■□□ 2.33
RACGAP1-220ENST00000550651 TRHP20396 242 aaPredicted RBP29.57■■■□□ 2.32
RACGAP1-220ENST00000550651 GRIN2BQ13224 1484 aa29.56■■■□□ 2.32
RACGAP1-220ENST00000550651 SYNJ1O43426 1573 aa29.54■■■□□ 2.32
RACGAP1-220ENST00000550651 SYNJ2O15056 1496 aa29.49■■■□□ 2.31
RACGAP1-220ENST00000550651 GAPVD1Q14C86 1478 aa29.42■■■□□ 2.3
RACGAP1-220ENST00000550651 PBRM1Q86U86 1689 aa29.4■■■□□ 2.3
RACGAP1-220ENST00000550651 ABCA10Q8WWZ4 1543 aa29.37■■■□□ 2.29
RACGAP1-220ENST00000550651 ABCA5Q8WWZ7 1642 aa29.34■■■□□ 2.29
RACGAP1-220ENST00000550651 SUPT5HO00267 1087 aaKnown RBP29.24■■■□□ 2.27
RACGAP1-220ENST00000550651 WRNQ14191 1432 aaPredicted RBP eCLIP29.2■■■□□ 2.27
RACGAP1-220ENST00000550651 GRIN2AQ12879 1464 aa29.18■■■□□ 2.26
RACGAP1-220ENST00000550651 ADAMTS12P58397 1594 aa29.13■■■□□ 2.25
RACGAP1-220ENST00000550651 TOP2BQ02880 1626 aa29.12■■■□□ 2.25
RACGAP1-220ENST00000550651 BIVM-ERCC5R4GMW8 1640 aa29.11■■■□□ 2.25
RACGAP1-220ENST00000550651 NUP160Q12769 1436 aa29.11■■■□□ 2.25
RACGAP1-220ENST00000550651 ERCC6L2Q5T890 1561 aa29.1■■■□□ 2.25
RACGAP1-220ENST00000550651 CEP170Q5SW79 1584 aa29.09■■■□□ 2.25
RACGAP1-220ENST00000550651 FHAD1B1AJZ9 1412 aa29.04■■■□□ 2.24
RACGAP1-220ENST00000550651 SHROOM2Q13796 1616 aa29.01■■■□□ 2.23
RACGAP1-220ENST00000550651 ERICH3Q5RHP9 1530 aa28.99■■■□□ 2.23
RACGAP1-220ENST00000550651 AEBP2Q6ZN18 517 aaPredicted RBP28.88■■■□□ 2.21
RACGAP1-220ENST00000550651 PRG4Q92954 1404 aaPredicted RBP28.84■■■□□ 2.21
RACGAP1-220ENST00000550651 JPH4Q96JJ6 628 aa28.8■■■□□ 2.2
RACGAP1-220ENST00000550651 RUSC2Q8N2Y8 1516 aa28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms