RNA–Protein interactions for RNA: ENST00000550648.1

APPL2-212, Transcript of adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2, humanhuman

TSL 3

Gene APPL2, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APPL2-212ENST00000550648 NISCHQ9Y2I1 1504 aa15.52■□□□□ 0.07
APPL2-212ENST00000550648 ABCC9O60706 1549 aa14.71□□□□□ -0.05
APPL2-212ENST00000550648 CCDC180Q9P1Z9 1646 aa14.19□□□□□ -0.14
APPL2-212ENST00000550648 DNAJC5BQ9UF47 199 aa14.14□□□□□ -0.15
APPL2-212ENST00000550648 RB1CC1Q8TDY2 1594 aa13.75□□□□□ -0.21
APPL2-212ENST00000550648 PABPN1Q86U42 306 aaKnown RBP eCLIP13.58□□□□□ -0.24
APPL2-212ENST00000550648 UNC13AQ9UPW8 1703 aa13.5□□□□□ -0.25
APPL2-212ENST00000550648 NACADO15069 1562 aa13.49□□□□□ -0.25
APPL2-212ENST00000550648 DCAF8L2P0C7V8 631 aa13.37□□□□□ -0.27
APPL2-212ENST00000550648 BICRAQ9NZM4 1560 aa13.35□□□□□ -0.27
APPL2-212ENST00000550648 DNAJC5Q9H3Z4 198 aa13.32□□□□□ -0.28
APPL2-212ENST00000550648 CECR2Q9BXF3 1484 aa13.28□□□□□ -0.28
APPL2-212ENST00000550648 CC2D2AQ9P2K1 1620 aa13.25□□□□□ -0.29
APPL2-212ENST00000550648 EIF4G1Q04637 1599 aaKnown RBP13.09□□□□□ -0.31
APPL2-212ENST00000550648 SHROOM4Q9ULL8 1493 aa13.07□□□□□ -0.32
APPL2-212ENST00000550648 MYO15BQ96JP2 1530 aa13.06□□□□□ -0.32
APPL2-212ENST00000550648 SCRIBQ14160 1630 aa12.98□□□□□ -0.33
APPL2-212ENST00000550648 CUX2O14529 1486 aa12.83□□□□□ -0.36
APPL2-212ENST00000550648 ZCCHC6Q5VYS8 1495 aaKnown RBP12.78□□□□□ -0.36
APPL2-212ENST00000550648 ERCC6Q03468 1493 aa12.76□□□□□ -0.37
APPL2-212ENST00000550648 DCAF1Q9Y4B6 1507 aa12.72□□□□□ -0.37
APPL2-212ENST00000550648 TRIM41Q8WV44 630 aa12.67□□□□□ -0.38
APPL2-212ENST00000550648 NESP48681 1621 aa12.49□□□□□ -0.41
APPL2-212ENST00000550648 THOC2Q8NI27 1593 aaKnown RBP12.48□□□□□ -0.41
APPL2-212ENST00000550648 SMARCA2P51531 1590 aa12.43□□□□□ -0.42
APPL2-212ENST00000550648 NCAPD3P42695 1498 aa12.4□□□□□ -0.42
APPL2-212ENST00000550648 KIF21AQ7Z4S6 1674 aa12.36□□□□□ -0.43
APPL2-212ENST00000550648 ATAD2BQ9ULI0 1458 aa12.35□□□□□ -0.43
APPL2-212ENST00000550648 HMGXB3Q12766 1538 aa12.34□□□□□ -0.43
APPL2-212ENST00000550648 BAZ1AQ9NRL2 1556 aaPredicted RBP12.28□□□□□ -0.44
APPL2-212ENST00000550648 LAMC3Q9Y6N6 1575 aa12.28□□□□□ -0.44
APPL2-212ENST00000550648 SMARCA4P51532 1647 aa12.27□□□□□ -0.44
APPL2-212ENST00000550648 BAZ1BQ9UIG0 1483 aaKnown RBP12.26□□□□□ -0.45
APPL2-212ENST00000550648 PDS5BQ9NTI5 1447 aa12.2□□□□□ -0.46
APPL2-212ENST00000550648 MRC2Q9UBG0 1479 aa12.17□□□□□ -0.46
APPL2-212ENST00000550648 WDR62O43379 1518 aa12.16□□□□□ -0.46
APPL2-212ENST00000550648 RIMBP3CA6NJZ7 1639 aa12.12□□□□□ -0.47
APPL2-212ENST00000550648 RIMBP3BA6NNM3 1639 aa12.12□□□□□ -0.47
APPL2-212ENST00000550648 RIMBP3Q9UFD9 1639 aa12.12□□□□□ -0.47
APPL2-212ENST00000550648 OSCARQ8IYS5 282 aa12.1□□□□□ -0.47
APPL2-212ENST00000550648 PEG3Q9GZU2 1588 aa12.08□□□□□ -0.48
APPL2-212ENST00000550648 CEP164Q9UPV0 1460 aa12.04□□□□□ -0.48
APPL2-212ENST00000550648 CADPSQ9ULU8 1353 aa12.03□□□□□ -0.48
APPL2-212ENST00000550648 ARHGEF11O15085 1522 aa12.01□□□□□ -0.49
APPL2-212ENST00000550648 AEBP2Q6ZN18 517 aaPredicted RBP12.01□□□□□ -0.49
APPL2-212ENST00000550648 MROH2BQ7Z745 1585 aa11.98□□□□□ -0.49
APPL2-212ENST00000550648 TRHP20396 242 aaPredicted RBP11.98□□□□□ -0.49
APPL2-212ENST00000550648 FANCD2Q9BXW9 1451 aa11.95□□□□□ -0.5
APPL2-212ENST00000550648 CYB5RLQ6IPT4 315 aa11.91□□□□□ -0.5
APPL2-212ENST00000550648 URB2Q14146 1524 aaKnown RBP11.89□□□□□ -0.51
APPL2-212ENST00000550648 WIZO95785 1651 aa11.86□□□□□ -0.51
APPL2-212ENST00000550648 ARAP1Q96P48 1450 aa11.85□□□□□ -0.51
APPL2-212ENST00000550648 ZNF608Q9ULD9 1512 aaPredicted RBP11.84□□□□□ -0.51
APPL2-212ENST00000550648 CHD1O14646 1710 aa11.83□□□□□ -0.52
APPL2-212ENST00000550648 EIF4G3O43432 1585 aaKnown RBP11.8□□□□□ -0.52
APPL2-212ENST00000550648 CFTRP13569 1480 aa11.79□□□□□ -0.52
APPL2-212ENST00000550648 IFT140Q96RY7 1462 aa11.77□□□□□ -0.52
APPL2-212ENST00000550648 PRDM2Q13029 1718 aa11.75□□□□□ -0.53
APPL2-212ENST00000550648 RSF1Q96T23 1441 aaPredicted RBP11.71□□□□□ -0.53
APPL2-212ENST00000550648 FBLN2P98095 1184 aa11.71□□□□□ -0.53
APPL2-212ENST00000550648 TOPBP1Q92547 1522 aa11.67□□□□□ -0.54
APPL2-212ENST00000550648 TOP2AP11388 1531 aaKnown RBP11.65□□□□□ -0.55
APPL2-212ENST00000550648 AQRO60306 1485 aaKnown RBP eCLIP11.64□□□□□ -0.55
APPL2-212ENST00000550648 CLASP1Q7Z460 1538 aa11.6□□□□□ -0.55
APPL2-212ENST00000550648 TARBP1Q13395 1621 aaKnown RBP11.6□□□□□ -0.55
APPL2-212ENST00000550648 DNMBPQ6XZF7 1577 aa11.6□□□□□ -0.55
APPL2-212ENST00000550648 SYNJ1O43426 1573 aa11.58□□□□□ -0.56
APPL2-212ENST00000550648 SNAPC4Q5SXM2 1469 aa11.56□□□□□ -0.56
APPL2-212ENST00000550648 ABCC8Q09428 1581 aa11.54□□□□□ -0.56
APPL2-212ENST00000550648 ILDR1Q86SU0 546 aaPredicted RBP11.54□□□□□ -0.56
APPL2-212ENST00000550648 POLA1P09884 1462 aaPredicted RBP11.52□□□□□ -0.56
APPL2-212ENST00000550648 GAPVD1Q14C86 1478 aa11.52□□□□□ -0.56
APPL2-212ENST00000550648 RAD54L2Q9Y4B4 1467 aa11.51□□□□□ -0.57
APPL2-212ENST00000550648 TDRD9Q8NDG6 1382 aaKnown RBP11.49□□□□□ -0.57
APPL2-212ENST00000550648 CCDC88BA6NC98 1476 aa11.48□□□□□ -0.57
APPL2-212ENST00000550648 CHMP7Q8WUX9 453 aaPredicted RBP11.47□□□□□ -0.57
APPL2-212ENST00000550648 MAGI1Q96QZ7 1491 aaPredicted RBP11.45□□□□□ -0.58
APPL2-212ENST00000550648 KIF13AQ9H1H9 1805 aa11.44□□□□□ -0.58
APPL2-212ENST00000550648 SYNJ2O15056 1496 aa11.43□□□□□ -0.58
APPL2-212ENST00000550648 SOGA1O94964 1423 aa11.43□□□□□ -0.58
APPL2-212ENST00000550648 PBRM1Q86U86 1689 aa11.43□□□□□ -0.58
APPL2-212ENST00000550648 WDR97A6NE52 1622 aa11.42□□□□□ -0.58
APPL2-212ENST00000550648 ERCC6L2Q5T890 1561 aa11.42□□□□□ -0.58
APPL2-212ENST00000550648 GRIN2BQ13224 1484 aa11.4□□□□□ -0.58
APPL2-212ENST00000550648 FGD5Q6ZNL6 1462 aa11.4□□□□□ -0.58
APPL2-212ENST00000550648 CEP170Q5SW79 1584 aa11.33□□□□□ -0.6
APPL2-212ENST00000550648 KDM6BO15054 1643 aa11.33□□□□□ -0.6
APPL2-212ENST00000550648 KDM4FA0A1W2PPD8 638 aa11.32□□□□□ -0.6
APPL2-212ENST00000550648 CUX1P39880 1505 aa11.3□□□□□ -0.6
APPL2-212ENST00000550648 ABCA5Q8WWZ7 1642 aa11.28□□□□□ -0.6
APPL2-212ENST00000550648 GRIN2AQ12879 1464 aa11.28□□□□□ -0.6
APPL2-212ENST00000550648 TSPOAP1O95153 1857 aa11.27□□□□□ -0.6
APPL2-212ENST00000550648 DIP2BQ9P265 1576 aa11.26□□□□□ -0.61
APPL2-212ENST00000550648 FAM69CQ0P6D2 419 aa11.26□□□□□ -0.61
APPL2-212ENST00000550648 SHROOM2Q13796 1616 aa11.26□□□□□ -0.61
APPL2-212ENST00000550648 ADAMTS12P58397 1594 aa11.25□□□□□ -0.61
APPL2-212ENST00000550648 HECW2Q9P2P5 1572 aa11.24□□□□□ -0.61
APPL2-212ENST00000550648 ABCC10Q5T3U5 1492 aa11.24□□□□□ -0.61
APPL2-212ENST00000550648 NUP160Q12769 1436 aa11.22□□□□□ -0.61
APPL2-212ENST00000550648 ADGRL1O94910 1474 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms