RNA–Protein interactions for RNA: ENST00000550593.1

WDR90-217, Transcript of WD repeat domain 90, humanhuman

TSL 4

Gene WDR90, Length 544 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR90-217ENST00000550593 NISCHQ9Y2I1 1504 aa45.55■■■■■ 4.88
WDR90-217ENST00000550593 CCDC180Q9P1Z9 1646 aa40.78■■■■■ 4.12
WDR90-217ENST00000550593 ABCC9O60706 1549 aa40.59■■■■■ 4.09
WDR90-217ENST00000550593 RB1CC1Q8TDY2 1594 aa38.69■■■■□ 3.78
WDR90-217ENST00000550593 NACADO15069 1562 aa38.45■■■■□ 3.75
WDR90-217ENST00000550593 DCAF8L2P0C7V8 631 aa38.39■■■■□ 3.74
WDR90-217ENST00000550593 MYO15BQ96JP2 1530 aa37.95■■■■□ 3.67
WDR90-217ENST00000550593 UNC13AQ9UPW8 1703 aa37.9■■■■□ 3.66
WDR90-217ENST00000550593 PABPN1Q86U42 306 aaKnown RBP eCLIP37.82■■■■□ 3.64
WDR90-217ENST00000550593 DNAJC5BQ9UF47 199 aa37.82■■■■□ 3.64
WDR90-217ENST00000550593 ZCCHC6Q5VYS8 1495 aaKnown RBP37.81■■■■□ 3.64
WDR90-217ENST00000550593 BICRAQ9NZM4 1560 aa37.59■■■■□ 3.61
WDR90-217ENST00000550593 DCAF1Q9Y4B6 1507 aa37.58■■■■□ 3.61
WDR90-217ENST00000550593 SCRIBQ14160 1630 aa37.25■■■■□ 3.55
WDR90-217ENST00000550593 SHROOM4Q9ULL8 1493 aa37■■■■□ 3.51
WDR90-217ENST00000550593 CC2D2AQ9P2K1 1620 aa36.67■■■■□ 3.46
WDR90-217ENST00000550593 EIF4G1Q04637 1599 aaKnown RBP36.64■■■■□ 3.46
WDR90-217ENST00000550593 CECR2Q9BXF3 1484 aa36.5■■■■□ 3.43
WDR90-217ENST00000550593 SMARCA4P51532 1647 aa35.51■■■■□ 3.28
WDR90-217ENST00000550593 NCAPD3P42695 1498 aa35.48■■■■□ 3.27
WDR90-217ENST00000550593 ATAD2BQ9ULI0 1458 aa35.45■■■■□ 3.27
WDR90-217ENST00000550593 SMARCA2P51531 1590 aa35.35■■■■□ 3.25
WDR90-217ENST00000550593 BAZ1AQ9NRL2 1556 aaPredicted RBP35.34■■■■□ 3.25
WDR90-217ENST00000550593 HMGXB3Q12766 1538 aa35.27■■■■□ 3.24
WDR90-217ENST00000550593 MROH2BQ7Z745 1585 aa35.14■■■■□ 3.22
WDR90-217ENST00000550593 BAZ1BQ9UIG0 1483 aaKnown RBP35.14■■■■□ 3.22
WDR90-217ENST00000550593 PEG3Q9GZU2 1588 aa35.11■■■■□ 3.21
WDR90-217ENST00000550593 ERCC6Q03468 1493 aa35.01■■■■□ 3.19
WDR90-217ENST00000550593 NESP48681 1621 aa34.95■■■■□ 3.18
WDR90-217ENST00000550593 CUX2O14529 1486 aa34.81■■■■□ 3.16
WDR90-217ENST00000550593 WIZO95785 1651 aa34.76■■■■□ 3.16
WDR90-217ENST00000550593 LAMC3Q9Y6N6 1575 aa34.68■■■■□ 3.14
WDR90-217ENST00000550593 THOC2Q8NI27 1593 aaKnown RBP34.53■■■■□ 3.12
WDR90-217ENST00000550593 KIF21AQ7Z4S6 1674 aa34.53■■■■□ 3.12
WDR90-217ENST00000550593 DNAJC5Q9H3Z4 198 aa34.49■■■■□ 3.11
WDR90-217ENST00000550593 RSF1Q96T23 1441 aaPredicted RBP34.47■■■■□ 3.11
WDR90-217ENST00000550593 PDS5BQ9NTI5 1447 aa34.44■■■■□ 3.1
WDR90-217ENST00000550593 CADPSQ9ULU8 1353 aa34.43■■■■□ 3.1
WDR90-217ENST00000550593 TOP2AP11388 1531 aaKnown RBP34.3■■■■□ 3.08
WDR90-217ENST00000550593 MRC2Q9UBG0 1479 aa34.18■■■■□ 3.06
WDR90-217ENST00000550593 CEP164Q9UPV0 1460 aa34.1■■■■□ 3.05
WDR90-217ENST00000550593 CFTRP13569 1480 aa34.09■■■■□ 3.05
WDR90-217ENST00000550593 WDR62O43379 1518 aa34.09■■■■□ 3.05
WDR90-217ENST00000550593 FANCD2Q9BXW9 1451 aa34.07■■■■□ 3.05
WDR90-217ENST00000550593 CCDC88BA6NC98 1476 aa33.89■■■■□ 3.02
WDR90-217ENST00000550593 PRDM2Q13029 1718 aa33.84■■■■□ 3.01
WDR90-217ENST00000550593 URB2Q14146 1524 aaKnown RBP33.8■■■■□ 3
WDR90-217ENST00000550593 TOPBP1Q92547 1522 aa33.47■■■□□ 2.95
WDR90-217ENST00000550593 IFT140Q96RY7 1462 aa33.38■■■□□ 2.93
WDR90-217ENST00000550593 DNMBPQ6XZF7 1577 aa33.37■■■□□ 2.93
WDR90-217ENST00000550593 ZNF608Q9ULD9 1512 aaPredicted RBP33.36■■■□□ 2.93
WDR90-217ENST00000550593 ABCC8Q09428 1581 aa33.34■■■□□ 2.93
WDR90-217ENST00000550593 OSCARQ8IYS5 282 aa33.24■■■□□ 2.91
WDR90-217ENST00000550593 EIF4G3O43432 1585 aaKnown RBP33.2■■■□□ 2.91
WDR90-217ENST00000550593 TRIM41Q8WV44 630 aa33.18■■■□□ 2.9
WDR90-217ENST00000550593 SUPT5HO00267 1087 aaKnown RBP33.17■■■□□ 2.9
WDR90-217ENST00000550593 TARBP1Q13395 1621 aaKnown RBP33.16■■■□□ 2.9
WDR90-217ENST00000550593 POLA1P09884 1462 aaPredicted RBP33.14■■■□□ 2.9
WDR90-217ENST00000550593 AQRO60306 1485 aaKnown RBP eCLIP33.07■■■□□ 2.88
WDR90-217ENST00000550593 RAD54L2Q9Y4B4 1467 aa33.05■■■□□ 2.88
WDR90-217ENST00000550593 CUX1P39880 1505 aa33■■■□□ 2.87
WDR90-217ENST00000550593 FGD5Q6ZNL6 1462 aa32.99■■■□□ 2.87
WDR90-217ENST00000550593 SOGA1O94964 1423 aa32.97■■■□□ 2.87
WDR90-217ENST00000550593 CHD1O14646 1710 aa32.94■■■□□ 2.86
WDR90-217ENST00000550593 TDRD9Q8NDG6 1382 aaKnown RBP32.9■■■□□ 2.86
WDR90-217ENST00000550593 RIMBP3CA6NJZ7 1639 aa32.88■■■□□ 2.85
WDR90-217ENST00000550593 RIMBP3BA6NNM3 1639 aa32.88■■■□□ 2.85
WDR90-217ENST00000550593 RIMBP3Q9UFD9 1639 aa32.88■■■□□ 2.85
WDR90-217ENST00000550593 FBLN2P98095 1184 aa32.81■■■□□ 2.84
WDR90-217ENST00000550593 WDR97A6NE52 1622 aa32.78■■■□□ 2.84
WDR90-217ENST00000550593 ARHGEF11O15085 1522 aa32.77■■■□□ 2.84
WDR90-217ENST00000550593 SNAPC4Q5SXM2 1469 aa32.76■■■□□ 2.84
WDR90-217ENST00000550593 GRIN2BQ13224 1484 aa32.66■■■□□ 2.82
WDR90-217ENST00000550593 PBRM1Q86U86 1689 aa32.62■■■□□ 2.81
WDR90-217ENST00000550593 MAGI1Q96QZ7 1491 aaPredicted RBP32.62■■■□□ 2.81
WDR90-217ENST00000550593 GAPVD1Q14C86 1478 aa32.59■■■□□ 2.81
WDR90-217ENST00000550593 ABCA10Q8WWZ4 1543 aa32.58■■■□□ 2.81
WDR90-217ENST00000550593 CHMP7Q8WUX9 453 aaPredicted RBP32.57■■■□□ 2.8
WDR90-217ENST00000550593 ABCA5Q8WWZ7 1642 aa32.55■■■□□ 2.8
WDR90-217ENST00000550593 BIVM-ERCC5R4GMW8 1640 aa32.54■■■□□ 2.8
WDR90-217ENST00000550593 SYNJ1O43426 1573 aa32.53■■■□□ 2.8
WDR90-217ENST00000550593 SYNJ2O15056 1496 aa32.52■■■□□ 2.8
WDR90-217ENST00000550593 WRNQ14191 1432 aaPredicted RBP eCLIP32.51■■■□□ 2.8
WDR90-217ENST00000550593 TOP2BQ02880 1626 aa32.51■■■□□ 2.8
WDR90-217ENST00000550593 CLASP1Q7Z460 1538 aa32.51■■■□□ 2.79
WDR90-217ENST00000550593 CYB5RLQ6IPT4 315 aa32.5■■■□□ 2.79
WDR90-217ENST00000550593 ARAP1Q96P48 1450 aa32.48■■■□□ 2.79
WDR90-217ENST00000550593 ADAMTS12P58397 1594 aa32.3■■■□□ 2.76
WDR90-217ENST00000550593 GRIN2AQ12879 1464 aa32.26■■■□□ 2.75
WDR90-217ENST00000550593 ERICH3Q5RHP9 1530 aa32.17■■■□□ 2.74
WDR90-217ENST00000550593 CEP170Q5SW79 1584 aa32.17■■■□□ 2.74
WDR90-217ENST00000550593 FHAD1B1AJZ9 1412 aa32.17■■■□□ 2.74
WDR90-217ENST00000550593 NUP160Q12769 1436 aa32.12■■■□□ 2.73
WDR90-217ENST00000550593 TRHP20396 242 aaPredicted RBP32.08■■■□□ 2.73
WDR90-217ENST00000550593 ERCC6L2Q5T890 1561 aa32.07■■■□□ 2.72
WDR90-217ENST00000550593 SHROOM2Q13796 1616 aa31.97■■■□□ 2.71
WDR90-217ENST00000550593 KIF27Q86VH2 1401 aa31.86■■■□□ 2.69
WDR90-217ENST00000550593 RUSC2Q8N2Y8 1516 aa31.85■■■□□ 2.69
WDR90-217ENST00000550593 PRG4Q92954 1404 aaPredicted RBP31.81■■■□□ 2.68
WDR90-217ENST00000550593 IGF1RP08069 1367 aa31.81■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms